FFCP PHASE1:Hg19::chr16:7382783..7382793,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NWB1,F8WAC5 | |||
|association_with_transcript=32bp_to_ENST00000311745,ENST00000340209,ENST00000352951,ENST00000355637,ENST00000436368,NM_145891,NM_145892,NM_145893,uc002cyw.2,uc002cyx.2,uc002cyy.2,uc010uyc.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_19_at_RBFOX1_5end | |||
|id=chr16:7382783..7382793,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.02e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.74e-23;4!UBERON:0007284;6.74e-23;4!UBERON:0010226;1.06e-11;1!UBERON:0004140;1.31e-11;1!UBERON:0000358;1.87e-11;1!UBERON:0010227;3.82e-11;1!UBERON:0004874;3.82e-11;1!UBERON:0003104;5.34e-11;31!UBERON:0006603;3.78e-10;65 | |||
|ontology_enrichment_disease=DOID:114!3.82e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.55e-21;2!DOID:178;2.42e-11;1!DOID:326;2.42e-11;1!DOID:3978;2.42e-11;1!DOID:3394;2.42e-11;1!DOID:5844;2.42e-11;1!DOID:1287;3.83e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.31e-21,2;DOID:178,2.18e-11,1;DOID:326,2.18e-11,1;DOID:3978,2.18e-11,1;DOID:3394,2.18e-11,1;DOID:5844,2.18e-11,1;DOID:1287,3.64e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-18!115;UBERON:0004151!1.82e-15!3;UBERON:0003978!1.91e-15!3;UBERON:0009751!1.91e-15!3;UBERON:0000946!1.91e-15!3;UBERON:0002523!1.91e-15!3;UBERON:0005983!1.91e-15!3;UBERON:0002165!1.91e-15!3;UBERON:0002062!1.91e-15!3;UBERON:0007280!1.91e-15!3;UBERON:0007100!2.10e-13!27;UBERON:0001630!3.82e-11!2;UBERON:0005090!3.82e-11!2;UBERON:0002133!9.67e-11!2;UBERON:0003103!1.00e-10!69;UBERON:0002081!1.06e-10!2;UBERON:0000341!1.49e-10!2;UBERON:0003127!6.40e-10!2;UBERON:0001723!2.18e-07!3;UBERON:0001033!2.18e-07!3;UBERON:0010056!2.18e-07!3;UBERON:0000948!7.09e-07!24;UBERON:0005498!7.09e-07!24;UBERON:0004140!7.09e-07!24;UBERON:0009881!7.09e-07!24;UBERON:0004141!7.09e-07!24;UBERON:0003084!7.09e-07!24;UBERON:0007005!7.09e-07!24;UBERON:0004139!7.09e-07!24;UBERON:0004291!7.09e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.65e-31;25!UBERON:0003978;2.74e-30;3!UBERON:0000946;2.74e-30;3!UBERON:0004151;3.03e-30;3!UBERON:0005090;2.43e-21;2!UBERON:0001630;2.43e-21;2!UBERON:0002133;1.50e-20;2!UBERON:0002081;2.35e-20;2!UBERON:0000948;5.47e-16;22!UBERON:0001134;1.06e-15;16!UBERON:0002036;1.06e-15;16!UBERON:0001723;5.05e-14;3!UBERON:0001033;5.05e-14;3!UBERON:0002084;1.06e-11;1!UBERON:0002082;1.06e-11;1!UBERON:0001389;1.18e-11;1!UBERON:0000026;1.18e-11;1!UBERON:0008784;1.18e-11;1!UBERON:0006058;1.18e-11;1!UBERON:0003663;1.18e-11;1!UBERON:0004256;1.18e-11;1!UBERON:0004708;1.18e-11;1!UBERON:0002101;1.18e-11;1!UBERON:0004709;1.18e-11;1!UBERON:0002529;1.18e-11;1!UBERON:0010538;1.18e-11;1!UBERON:0003661;1.18e-11;1!UBERON:0010890;1.18e-11;1!UBERON:0002471;1.18e-11;1!UBERON:0001383;1.18e-11;1!UBERON:0010758;1.18e-11;1!UBERON:0010707;1.18e-11;1!UBERON:0000978;1.18e-11;1!UBERON:0002103;1.18e-11;1!UBERON:0001665;1.18e-11;1!UBERON:0003823;1.18e-11;1!UBERON:0000154;1.18e-11;1!UBERON:0010709;1.18e-11;1!UBERON:0002146;1.52e-11;1!UBERON:0005623;1.52e-11;1!UBERON:0002426;1.87e-11;1!UBERON:0003831;1.87e-11;1!UBERON:0003898;1.87e-11;1!UBERON:0004830;1.87e-11;1!UBERON:0003830;1.87e-11;1!UBERON:0005175;1.87e-11;1!UBERON:0001774;1.87e-11;1!UBERON:0001103;1.87e-11;1!UBERON:0002135;2.42e-11;1!UBERON:0002079;3.82e-11;1!UBERON:0000989;3.82e-11;1!UBERON:0008811;3.82e-11;1!UBERON:0007029;5.70e-11;1!UBERON:0002134;5.70e-11;1!UBERON:0005208;5.70e-11;1!UBERON:0004145;5.70e-11;1!UBERON:0005946;5.70e-11;1!UBERON:0005965;5.70e-11;1!UBERON:0002078;5.70e-11;1!UBERON:0010313;1.63e-09;10!UBERON:0002385;4.76e-08;31!UBERON:0001015;4.76e-08;31!UBERON:0000383;4.76e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.48e-30,3;UBERON:0003978,2.74e-30,3;UBERON:0009751,2.74e-30,3;UBERON:0000946,2.74e-30,3;UBERON:0002523,2.74e-30,3;UBERON:0005983,2.74e-30,3;UBERON:0002165,2.74e-30,3;UBERON:0002062,2.74e-30,3;UBERON:0007280,2.74e-30,3;UBERON:0007100,6.00e-29,27;UBERON:0005090,2.31e-21,2;UBERON:0001630,2.31e-21,2;UBERON:0002133,1.57e-20,2;UBERON:0002081,1.92e-20,2;UBERON:0010227,1.92e-20,2;UBERON:0003103,3.78e-16,68;UBERON:0000948,1.19e-14,24;UBERON:0005498,1.19e-14,24;UBERON:0004140,1.19e-14,24;UBERON:0009881,1.19e-14,24;UBERON:0004141,1.19e-14,24;UBERON:0003084,1.19e-14,24;UBERON:0007005,1.19e-14,24;UBERON:0004139,1.19e-14,24;UBERON:0004291,1.19e-14,24;UBERON:0001723,6.16e-14,3;UBERON:0001033,6.16e-14,3;UBERON:0010056,6.16e-14,3;UBERON:0004797,2.34e-13,7;UBERON:0007023,7.69e-13,114;UBERON:0002084,1.06e-11,1;UBERON:0002082,1.06e-11,1;UBERON:0010226,1.06e-11,1;UBERON:0005418,1.18e-11,1;UBERON:0001389,1.18e-11,1;UBERON:0000026,1.18e-11,1;UBERON:0008784,1.18e-11,1;UBERON:0006058,1.18e-11,1;UBERON:0003663,1.18e-11,1;UBERON:0004256,1.18e-11,1;UBERON:0004708,1.18e-11,1;UBERON:0002101,1.18e-11,1;UBERON:0004709,1.18e-11,1;UBERON:0002529,1.18e-11,1;UBERON:0010538,1.18e-11,1;UBERON:0003661,1.18e-11,1;UBERON:0010890,1.18e-11,1;UBERON:0002471,1.18e-11,1;UBERON:0001383,1.18e-11,1;UBERON:0004357,1.18e-11,1;UBERON:0004347,1.18e-11,1;UBERON:0005420,1.18e-11,1;UBERON:0005732,1.18e-11,1;UBERON:0010758,1.18e-11,1;UBERON:0010707,1.18e-11,1;UBERON:0000978,1.18e-11,1;UBERON:0002103,1.18e-11,1;UBERON:0001665,1.18e-11,1;UBERON:0003823,1.18e-11,1;UBERON:0000154,1.18e-11,1;UBERON:0010709,1.18e-11,1;UBERON:0005733,1.18e-11,1;UBERON:0005730,1.18e-11,1;UBERON:0002146,1.45e-11,1;UBERON:0005623,1.45e-11,1;UBERON:0002426,1.78e-11,1;UBERON:0003831,1.78e-11,1;UBERON:0003898,1.78e-11,1;UBERON:0004830,1.78e-11,1;UBERON:0003830,1.78e-11,1;UBERON:0005175,1.78e-11,1;UBERON:0001774,1.78e-11,1;UBERON:0001103,1.78e-11,1;UBERON:0010084,1.78e-11,1;UBERON:0002135,2.42e-11,1;UBERON:0002079,2.96e-11,1;UBERON:0000989,3.63e-11,1;UBERON:0008811,3.63e-11,1;UBERON:0006258,3.63e-11,1;UBERON:0005876,3.63e-11,1;UBERON:0004874,3.63e-11,1;UBERON:0007029,5.43e-11,1;UBERON:0002134,6.00e-11,1;UBERON:0005208,6.00e-11,1;UBERON:0005946,6.00e-11,1;UBERON:0005965,6.00e-11,1;UBERON:0002078,6.00e-11,1;UBERON:0010313,1.63e-09,10;UBERON:0002342,1.63e-09,10;UBERON:0005062,1.63e-09,10 | |||
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|short_description=p19@RBFOX1 | |||
}} |
Revision as of 02:13, 12 January 2014
Short description: | p19@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RBFOX1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 32bp_to_ENST00000311745, ENST00000340209, ENST00000352951, ENST00000355637, ENST00000436368, NM_145891, NM_145892, NM_145893, uc002cyw.2, uc002cyx.2, uc002cyy.2, uc010uyc.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q9NWB1F8WAC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.31e-21 | 2 |
vascular disease | 2.18e-11 | 1 |
ischemia | 2.18e-11 | 1 |
extrinsic cardiomyopathy | 2.18e-11 | 1 |
myocardial ischemia | 2.18e-11 | 1 |
myocardial infarction | 2.18e-11 | 1 |
cardiovascular system disease | 3.64e-11 | 4 |