FFCP PHASE1:Hg19::chr2:216236944..216236994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216236944..216236994,+ | |||
|id=chr2:216236944..216236994,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.80e-24!180;CL:0000057!1.36e-19!75;CL:0002371!3.48e-19!591;CL:0000144!4.82e-17!625;CL:0000048!5.39e-14!430;CL:0000723!7.45e-14!436;CL:0000680!2.38e-13!57;CL:0000056!2.38e-13!57;CL:0000355!2.38e-13!57;CL:0000548!2.48e-13!679;CL:0000004!2.48e-13!679;CL:0000255!2.48e-13!679;CL:0000012!5.88e-13!682;CL:0000034!9.71e-13!444;CL:0000183!2.30e-12!59;CL:0000187!5.41e-12!54;CL:0002334!5.15e-10!12;CL:0000393!1.35e-09!60;CL:0000211!1.35e-09!60;CL:0002620!1.54e-09!23;CL:0000003!2.39e-09!722;CL:0002570!5.79e-08!8;CL:0002494!1.25e-07!16;CL:0002320!4.35e-07!365;CL:0000222!7.50e-07!119;CL:0000192!8.11e-07!42;CL:0000514!8.11e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.19e-11;8!CL:0002494;7.31e-10;16!CL:0000723;1.05e-09;61!CL:0002334;2.35e-09;12!CL:0000134;1.18e-08;55!CL:1000306;2.22e-08;4!CL:0002547;2.22e-08;4!CL:0000034;8.19e-08;69!CL:0000048;3.34e-07;58!CL:0002541;4.04e-07;3!CL:0002580;6.47e-07;3!CL:0000349;6.92e-07;19!CL:0000057;7.82e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-18,76;CL:0000048,2.25e-13,427;CL:0000723,6.85e-13,433;CL:0000034,2.89e-12,441;CL:0002570,8.79e-12,8;CL:0002494,8.12e-10,16;CL:0002334,2.18e-09,12;CL:1000306,1.50e-08,4;CL:0002547,1.50e-08,4;CL:0002320,3.44e-08,361;CL:0000134,8.88e-08,354;CL:0000680,2.19e-07,58;CL:0000056,2.19e-07,58;CL:0000355,2.19e-07,58;CL:0002541,2.82e-07,3;CL:0000187,3.53e-07,55;CL:0002580,7.43e-07,3;CL:0000349,8.89e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.80e-14!83;UBERON:0002329!3.80e-14!83;UBERON:0003077!3.80e-14!83;UBERON:0003059!3.80e-14!83;UBERON:0007282!3.80e-14!83;UBERON:0009618!3.80e-14!83;UBERON:0007285!3.80e-14!83;UBERON:0004290!6.93e-13!70;UBERON:0000486!7.46e-12!82;UBERON:0001134!1.34e-11!61;UBERON:0002036!1.34e-11!61;UBERON:0003082!1.34e-11!61;UBERON:0002385!1.41e-11!63;UBERON:0001015!1.41e-11!63;UBERON:0000383!1.41e-11!63;UBERON:0005256!1.28e-09!143;UBERON:0004923!4.31e-09!57;UBERON:0004872!4.79e-09!84;UBERON:0001013!7.53e-09!14;UBERON:0000490!1.28e-08!138;UBERON:0005631!3.08e-08!14;UBERON:0000158!3.08e-08!14;UBERON:0002199!1.95e-07!45;UBERON:0002416!1.95e-07!45;UBERON:0002384!3.72e-07!375;UBERON:0004535!4.06e-07!110;UBERON:0001009!6.46e-07!113;UBERON:0001637!7.38e-07!42;UBERON:0003509!7.38e-07!42;UBERON:0004572!7.38e-07!42;UBERON:0003914!8.52e-07!118;UBERON:0002049!8.81e-07!79;UBERON:0007798!8.81e-07!79;UBERON:0000478!9.61e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.29e-13;14!UBERON:0004797;2.22e-08;4!UBERON:0000415;2.22e-08;4!UBERON:0007240;2.22e-08;4!UBERON:0005742;2.22e-08;4!UBERON:0005734;2.22e-08;4!UBERON:0004664;2.22e-08;4!UBERON:0004663;2.22e-08;4!UBERON:0003124;4.04e-07;3!UBERON:0000920;4.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.25e-13,14;UBERON:0002384,1.28e-08,371;UBERON:0000415,1.50e-08,4;UBERON:0007240,1.50e-08,4;UBERON:0005742,1.50e-08,4;UBERON:0005734,1.50e-08,4;UBERON:0004664,1.50e-08,4;UBERON:0004663,1.50e-08,4;UBERON:0000948,1.62e-08,24;UBERON:0005498,1.62e-08,24;UBERON:0004140,1.62e-08,24;UBERON:0009881,1.62e-08,24;UBERON:0004141,1.62e-08,24;UBERON:0003084,1.62e-08,24;UBERON:0007005,1.62e-08,24;UBERON:0004139,1.62e-08,24;UBERON:0004291,1.62e-08,24;UBERON:0007524,3.14e-08,73;UBERON:0002329,1.21e-07,71;UBERON:0003059,1.21e-07,71;UBERON:0007282,1.21e-07,71;UBERON:0004290,1.21e-07,71;UBERON:0009618,1.21e-07,71;UBERON:0004872,1.31e-07,83;UBERON:0003077,1.84e-07,72;UBERON:0007285,1.84e-07,72;UBERON:0000920,2.82e-07,3;UBERON:0007100,2.84e-07,27;UBERON:0002199,3.59e-07,46;UBERON:0002416,3.59e-07,46 | |||
|phase1_expression=1.99846217197612,1.49870366723688,0.986680828671798,4.00293193412522,0.446961094427288,4.36169262050184,2.53299878168311,0,0.522371256399677,0,0,0.436882744260345,1.05506791291381,0.123766352960047,0.994192127183747,2.01697543935533,3.61616716814386,2.92124036154949,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,1.66221330396589,0.722878304769133,0,1.30361867064741,0,15.5723158496843,0.189069634328136,0,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,1.62028389576352,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,4.47274756525787,1.8994576749687,7.0176865831006,4.58938593198102,1.41867352879343,1.12135520028461,0,5.67335361359468,0,1.61652806483626,0.980771418680752,0.454072282934794,2.88087962239999,0.234321431833797,1.24864030732128,0,3.43731965269142,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,1.48360157567134,0,0,1.0100166837244,0.125118519871964,0,0,1.5324389789951,0.901428353439581,2.1552114800404,2.87023417102179,0.213557388818567,2.33125091275518,1.80054657650641,0.412210116953756,2.57640540045629,0.744467425326359,3.71307930930786,1.16924406193438,2.77677151668526,0.460249493211497,0.323292113637624,1.77504796258307,0.201504196455281,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,7.07565032012174,0,3.71494342425583,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.686271241194102,0.329250856225877,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,1.70161193135412,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0.22001485746285,0.646358578788889,3.57656445851882,3.381211010224,0.26593811658487,0,1.54324424557285,0,0.532844358032199,0.285955987316295,0,0.823240336780769,1.62868092146868,0.355391948742546,3.16780749173372,0.602878754119172,0,0,0,0,0,2.15662369942424,0,0,1.01346914667305,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,1.08506009479894,2.70362119990049,4.99601168632053,2.68094105557689,0.937131319941706,0,0,0,1.99267679560631,0.921845842708516,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0.106727557803444,0.303127571446259,4.99306318531491,0.907170879989041,1.48864684691266,9.97502826372406,3.08726103876381,1.15325234330131,0.511707249066704,1.93024705372329,4.45254199334973,0.925258162815933,3.19611105563629,0.98552587216571,0.519254429183621,1.74315567689939,0,1.00253235151642,0,0.229628896329213,0.364182336013434,0.786746489756545,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,1.25671933779759,1.3864375540318,1.84204409671355,0.689182862422653,1.82614416276065,1.88521702088497,0.852266274161009,0.356128142586949,1.15699440752685,0.384380134730212,0.382838137483752,0.30347334256665,0,3.46293581513704,0,0.924100740528266,0,0,0.18532421910392,0,0.744316738719335,1.2655176988749,0.762520775695299,0.255897791311334,0.42793898803392,0,1.56989728039846,0.719489830333259,0.54907405947211,0.589062011728432,0,1.58510321173008,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.424216295861138,1.13008116620243,0,0,0,0,1.31178950409327,0.405820753925408,0.30982349809975,0,0.286822704408103,1.27723753317057,0,0.354761064070598,0.211107635297664,1.97576935775941,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.593929361665277,1.22864280839693,0,0,3.89580467580171,0,0,0,0,0,0,0,6.53183134089796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,9.25103363222567,1.83195186803725,33.0481561131554,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0,1.80149941771202,0,0.157566364614447,0.247247575143499,0.26961417541674,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,2.83584125485061,2.80455971816669,2.77402930751307,3.03044808440143,3.52195062453605,0,1.14420034198462,2.7221566277383,1.5543720058278,0.443565449968902,0.477890301491107,0,0.7763147843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| |||
|short_description=p@chr2:216236944..216236994,+ | |||
}} |
Revision as of 08:19, 21 January 2014
Short description: | p@chr2:216236944..216236994, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216236944..216236994, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.29e-18 | 76 |
multi fate stem cell | 2.25e-13 | 427 |
somatic stem cell | 6.85e-13 | 433 |
stem cell | 2.89e-12 | 441 |
mesenchymal stem cell of adipose | 8.79e-12 | 8 |
cardiocyte | 8.12e-10 | 16 |
preadipocyte | 2.18e-09 | 12 |
fibroblast of tunica adventitia of artery | 1.50e-08 | 4 |
fibroblast of the aortic adventitia | 1.50e-08 | 4 |
connective tissue cell | 3.44e-08 | 361 |
mesenchymal cell | 8.88e-08 | 354 |
muscle precursor cell | 2.19e-07 | 58 |
myoblast | 2.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.19e-07 | 58 |
chorionic membrane mesenchymal stem cell | 2.82e-07 | 3 |
muscle cell | 3.53e-07 | 55 |
preadipocyte of the breast | 7.43e-07 | 3 |
extraembryonic cell | 8.89e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 5.25e-13 | 14 |
connective tissue | 1.28e-08 | 371 |
artery wall | 1.50e-08 | 4 |
tunica adventitia of artery | 1.50e-08 | 4 |
adventitia | 1.50e-08 | 4 |
tunica adventitia of blood vessel | 1.50e-08 | 4 |
aorta tunica adventitia | 1.50e-08 | 4 |
aorta wall | 1.50e-08 | 4 |
heart | 1.62e-08 | 24 |
primitive heart tube | 1.62e-08 | 24 |
primary heart field | 1.62e-08 | 24 |
anterior lateral plate mesoderm | 1.62e-08 | 24 |
heart tube | 1.62e-08 | 24 |
heart primordium | 1.62e-08 | 24 |
cardiac mesoderm | 1.62e-08 | 24 |
cardiogenic plate | 1.62e-08 | 24 |
heart rudiment | 1.62e-08 | 24 |
dense mesenchyme tissue | 3.14e-08 | 73 |
somite | 1.21e-07 | 71 |
presomitic mesoderm | 1.21e-07 | 71 |
presumptive segmental plate | 1.21e-07 | 71 |
dermomyotome | 1.21e-07 | 71 |
trunk paraxial mesoderm | 1.21e-07 | 71 |
splanchnic layer of lateral plate mesoderm | 1.31e-07 | 83 |
paraxial mesoderm | 1.84e-07 | 72 |
presumptive paraxial mesoderm | 1.84e-07 | 72 |
egg chorion | 2.82e-07 | 3 |
primary circulatory organ | 2.84e-07 | 27 |
integument | 3.59e-07 | 46 |
integumental system | 3.59e-07 | 46 |