FFCP PHASE1:Hg19::chr3:9851393..9851436,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24483 | |||
|TSSclassifier=strong | |||
|UniProt=C9JQ30,C9IZU0,C9JNK2,C9JRM2 | |||
|association_with_transcript=0bp_to_ENST00000417065,ENST00000418745,ENST00000438596,ENST00000439814,ENST00000459758_5end | |||
|coexpression_cluster_id=C805 | |||
|description=CAGE_peak_3_at_TTLL3_5end | |||
|id=chr3:9851393..9851436,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.02e-41!140;CL:0000037!1.25e-41!172;CL:0000566!1.25e-41!172;CL:0002032!2.67e-38!165;CL:0000837!2.67e-38!165;CL:0000988!6.23e-38!182;CL:0002031!7.80e-38!124;CL:0002087!3.81e-37!119;CL:0000557!3.04e-28!71;CL:0000766!4.33e-27!76;CL:0000763!1.07e-25!112;CL:0000049!1.07e-25!112;CL:0000839!1.42e-25!70;CL:0002009!4.23e-25!65;CL:0002194!2.50e-24!63;CL:0000576!2.50e-24!63;CL:0000040!2.50e-24!63;CL:0000559!2.50e-24!63;CL:0002057!3.83e-20!42;CL:0000860!2.00e-19!45;CL:0000838!1.85e-11!52;CL:0000542!2.72e-11!53;CL:0000051!2.72e-11!53;CL:0000791!1.54e-10!18;CL:0000789!1.54e-10!18;CL:0002420!1.54e-10!18;CL:0002419!1.54e-10!18;CL:0000790!1.54e-10!18;CL:0000625!2.10e-07!11;CL:0000134!2.20e-07!358;CL:0002393!6.00e-07!9;CL:0002397!6.00e-07!9;CL:0002320!6.34e-07!365;CL:0000236!9.31e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.62e-22;48!CL:0000860;4.55e-20;33!CL:0002057;4.55e-20;33!CL:0000766;1.89e-17;69!CL:0000791;2.18e-16;18!CL:0000789;2.18e-16;18!CL:0002419;2.18e-16;18!CL:0000473;2.21e-16;39!CL:0000234;2.21e-16;39!CL:0002087;1.76e-15;104!CL:0000738;1.63e-12;136!CL:0000763;1.30e-11;100!CL:0000625;3.18e-11;11!CL:0000084;3.47e-10;25!CL:0000236;4.48e-10;13!CL:0000988;7.63e-10;177!CL:0000542;1.50e-09;53!CL:0000624;3.81e-08;6!CL:0002393;2.66e-07;6!CL:0002397;2.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.58e-63,168;CL:0000738,2.78e-60,136;CL:0000988,4.10e-58,177;CL:0002032,2.84e-57,161;CL:0000837,2.84e-57,161;CL:0002031,1.09e-54,120;CL:0002087,5.20e-53,115;CL:0000557,9.67e-42,67;CL:0000763,1.32e-39,108;CL:0000049,1.32e-39,108;CL:0000766,3.85e-39,72;CL:0000839,2.02e-37,66;CL:0002009,1.89e-36,61;CL:0002194,3.82e-35,59;CL:0000576,3.82e-35,59;CL:0000040,3.82e-35,59;CL:0000559,3.82e-35,59;CL:0000860,5.05e-31,42;CL:0002057,5.05e-31,42;CL:0000473,1.32e-29,48;CL:0000234,1.32e-29,48;CL:0000791,1.10e-16,18;CL:0000789,1.10e-16,18;CL:0002420,1.10e-16,18;CL:0002419,1.10e-16,18;CL:0000790,1.10e-16,18;CL:0000838,1.29e-15,52;CL:0000542,4.11e-15,53;CL:0000051,4.11e-15,53;CL:0000134,1.51e-14,354;CL:0002320,1.25e-13,361;CL:0000625,1.47e-11,11;CL:0000219,7.40e-11,386;CL:0002393,8.78e-11,9;CL:0002397,8.78e-11,9;CL:0000084,2.21e-10,25;CL:0000827,2.21e-10,25;CL:0000236,2.92e-09,14;CL:0000624,4.10e-08,6;CL:0000034,1.19e-07,441;CL:0000048,1.69e-07,427;CL:0000723,5.19e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.41e-23;42!CL:0000790;2.18e-16;18!CL:0000049;2.17e-11;108!CL:0000051;1.50e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.37e-31!102;UBERON:0003061!3.37e-31!102;UBERON:0002193!3.20e-29!112;UBERON:0002371!2.45e-23!80;UBERON:0001474!5.56e-20!86;UBERON:0004765!2.98e-15!101;UBERON:0001434!2.98e-15!101;UBERON:0002405!2.79e-14!115;UBERON:0007023!9.09e-11!115;UBERON:0000178!1.21e-07!15;UBERON:0000179!1.21e-07!15;UBERON:0000463!1.21e-07!15;UBERON:0003081!6.11e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.78e-10;15!UBERON:0000179;4.78e-10;15!UBERON:0000463;4.78e-10;15!UBERON:0002390;3.40e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.63e-48,98;UBERON:0003061,2.63e-48,98;UBERON:0002193,8.57e-43,108;UBERON:0002371,3.71e-36,76;UBERON:0002405,2.07e-33,93;UBERON:0001474,5.25e-32,82;UBERON:0004765,2.28e-27,90;UBERON:0001434,1.51e-23,100;UBERON:0003081,4.94e-14,203;UBERON:0002384,2.15e-12,371;UBERON:0000178,3.40e-10,15;UBERON:0000179,3.40e-10,15;UBERON:0000463,3.40e-10,15;UBERON:0002204,1.79e-08,167 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,1.14620108621927,0.985207073399349,0.787107813136792,4.72037132218685,3.0706351847777,3.71558695958582,0,0,0.369754010166788,0,0,5.87200878669694,3.32397245119126,4.61252229181326,3.25516306073778,1.34349284543955,1.94336199611388,2.57575567634187,3.19876125315042,3.02300754951048,1.4555043671269,3.25400651667958,2.87817521615278,1.85823822537062,2.3015391385772,3.33008918487831,1.41889337933151,2.75796544589295,3.22742341791913,1.35426486594342,2.44715041405386,2.18324920046277,2.24723484445085,2.44867113896722,2.56743221660875,2.55734850319616,2.63881040149373,2.39356389145958,3.40979800426155,2.03146467040009,2.8369261234557,0.622822248995575,2.26123798731069,3.65038042894141,1.52032191293582,0.605399502633369,2.20966581592539,1.26584954976354,3.80259515361495,3.4016687994407,4.19317291016752,4.04383072127382,2.4028302854641,1.76798145366788,8.55038231223746,6.16641699317179,6.94123784305609,3.51992488922645,3.82297027883492,6.22656477704488,3.41384178053206,2.80277190925209,3.4485146397269,5.2883589822789,2.86216126360609,7.96898156753228,8.22132065119314,8.02773779062981,13.2171328579026,6.72610275577843,6.32121803460185,6.49142241375649,6.6811829667358,3.49522548299166,3.67810289859492,8.14805666583976,6.15482147455153,7.79306913631645,2.67385096524417,4.41908861212256,4.65221178625604,5.1452734115353,1.0247305578054,1.1705341280389,2.46656856905514,1.65810010671509,3.47763702882063,5.78317596332036,5.08327573370455,7.31748666634838,3.28597093822942,4.21542542962113,6.52892146416997,7.59059076058509,2.54852331459277,2.60433381542567,3.8018081777935,2.86092726247768,4.73550461271348,3.74792179657038,3.78843603270427,1.64225599384209,4.43534835094411,5.61624411145365,5.21367853978076,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0.378139268656271,0,0.175669571386252,1.11332214173056,0,0,1.9472843619281,1.91542711029194,1.46253756570752,10.7320780937404,10.2959083940423,11.1437250398869,0,0,0.694281003215189,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685633159,1.0126579934476,0,0.757301322732344,0.276149695926898,0,1.06502877754984,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,2.37061319387782,0,0.984868024349589,0.702012795417713,0.891786973732369,0,0,0,0.0895585227028483,0.290633938513962,0,1.97065295158377,2.55340458638356,3.52457796419313,4.61183850934277,1.51490920111656,0.190493682876507,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,6.5020150866636,3.45004119775228,4.36366323351144,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.24538298343828,0,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,5.58273670531796,4.09856981555372,5.87001567918944,0,0,0,0,0.767309866440312,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0.219259876645935,0,0,0,0,0.618246069886334,0.183138929636687,0,0.574265537996172,0,0,0.193341436584244,0,0,0.137836572484531,0.429680979473094,0.290033387828457,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.765676274967505,0,0.464845549297286,0.94443704049192,1.3940745403212,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,3.55213326462519,2.29391162142713,3.98753031021914,5.71756261098694,4.93634727703433,3.8908398671563,4.32025149790492,4.758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| |||
|short_description=p3@TTLL3 | |||
}} |
Revision as of 17:13, 21 January 2014
Short description: | p3@TTLL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTLL3_5end |
Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000417065, ENST00000418745, ENST00000438596, ENST00000439814, ENST00000459758_5end |
EntrezGene: | TTLL3 |
HGNC: | 24483 |
UniProt: | C9JQ30C9IZU0C9JNK2C9JRM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.63e-48 | 98 |
blood island | 2.63e-48 | 98 |
hemolymphoid system | 8.57e-43 | 108 |
bone marrow | 3.71e-36 | 76 |
immune system | 2.07e-33 | 93 |
bone element | 5.25e-32 | 82 |
skeletal element | 2.28e-27 | 90 |
skeletal system | 1.51e-23 | 100 |
lateral plate mesoderm | 4.94e-14 | 203 |
connective tissue | 2.15e-12 | 371 |
blood | 3.40e-10 | 15 |
haemolymphatic fluid | 3.40e-10 | 15 |
organism substance | 3.40e-10 | 15 |
musculoskeletal system | 1.79e-08 | 167 |