FFCP PHASE1:Hg19::chr5:39203138..39203175,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000515010,uc003jls.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_FYB_5end | |||
|id=chr5:39203138..39203175,- | |||
|ontology_enrichment_celltype=CL:0000037!3.35e-55!172;CL:0000566!3.35e-55!172;CL:0002032!2.23e-49!165;CL:0000837!2.23e-49!165;CL:0000988!2.34e-49!182;CL:0000738!7.00e-40!140;CL:0000763!9.16e-37!112;CL:0000049!9.16e-37!112;CL:0002031!2.03e-29!124;CL:0002087!1.90e-28!119;CL:0000766!3.19e-22!76;CL:0000839!7.68e-18!70;CL:0000084!1.32e-17!25;CL:0000827!1.32e-17!25;CL:0000557!1.74e-17!71;CL:0000791!3.61e-17!18;CL:0000789!3.61e-17!18;CL:0002420!3.61e-17!18;CL:0002419!3.61e-17!18;CL:0000790!3.61e-17!18;CL:0002194!2.41e-15!63;CL:0000576!2.41e-15!63;CL:0000040!2.41e-15!63;CL:0000559!2.41e-15!63;CL:0002009!2.92e-15!65;CL:0002057!1.69e-13!42;CL:0000860!8.18e-12!45;CL:0000838!1.49e-11!52;CL:0000625!4.07e-11!11;CL:0000542!4.21e-11!53;CL:0000051!4.21e-11!53;CL:0000134!1.73e-07!358;CL:0000094!2.27e-07!8;CL:0000624!3.67e-07!6;CL:0000451!8.90e-07!10;CL:0002320!9.69e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.15e-25;18!CL:0000789;6.15e-25;18!CL:0002419;6.15e-25;18!CL:0000084;1.02e-24;25!CL:0000625;7.35e-16;11!CL:0000094;3.11e-10;8!CL:0000624;5.96e-10;6!CL:0000451;1.29e-09;10!CL:0000990;1.65e-07;8!CL:0000988;5.03e-07;177!CL:0000081;6.07e-07;11!CL:0000542;9.50e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.44e-38,168;CL:0000988,1.13e-34,177;CL:0002032,1.23e-31,161;CL:0000837,1.23e-31,161;CL:0000738,6.51e-28,136;CL:0000791,6.48e-25,18;CL:0000789,6.48e-25,18;CL:0002420,6.48e-25,18;CL:0002419,6.48e-25,18;CL:0000790,6.48e-25,18;CL:0000084,9.90e-25,25;CL:0000827,9.90e-25,25;CL:0000763,4.61e-19,108;CL:0000049,4.61e-19,108;CL:0002087,3.60e-17,115;CL:0000625,7.56e-16,11;CL:0002031,3.86e-15,120;CL:0000838,3.43e-12,52;CL:0000542,8.32e-12,53;CL:0000051,8.32e-12,53;CL:0000094,2.97e-10,8;CL:0000624,6.07e-10,6;CL:0000451,1.18e-09,10;CL:0000766,1.39e-09,72;CL:0000990,1.50e-07,8;CL:0000081,5.87e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.15e-25;18!CL:0000051;9.50e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!2.23e-14!39;DOID:8692!1.12e-13!31;DOID:2531!1.86e-11!51;DOID:0060083!1.86e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.44e-11;31!DOID:1240;3.88e-10;39!DOID:2531;8.17e-08;51!DOID:0060083;8.17e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.35e-12,39;DOID:8692,2.51e-11,31;DOID:2531,4.83e-10,51;DOID:0060083,4.83e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-24!102;UBERON:0003061!1.29e-24!102;UBERON:0002193!3.82e-22!112;UBERON:0007023!5.85e-19!115;UBERON:0002371!2.13e-14!80;UBERON:0002405!9.78e-13!115;UBERON:0001474!1.09e-12!86;UBERON:0004765!1.17e-09!101;UBERON:0001434!1.17e-09!101;UBERON:0000178!5.62e-08!15;UBERON:0000179!5.62e-08!15;UBERON:0000463!5.62e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.57e-12;15!UBERON:0000179;5.57e-12;15!UBERON:0000463;5.57e-12;15!UBERON:0002390;3.00e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-14,98;UBERON:0003061,1.16e-14,98;UBERON:0002193,7.05e-14,108;UBERON:0000178,5.65e-12,15;UBERON:0000179,5.65e-12,15;UBERON:0000463,5.65e-12,15;UBERON:0002405,2.28e-07,93;UBERON:0004177,2.84e-07,7;UBERON:0005057,2.84e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,7.86728553697808,16.8884935162774,6.50227717927519,0,0,0,0,0,3.52320527201817,3.87796785972314,14.0381113229099,12.1526087600877,1.34349284543955,8.42123531649347,2.31818010870768,0.436194716338694,2.26725566213286,2.18325655069035,0.697287110717054,0.822335776043652,1.23882548358041,0.28769239232215,0.768482119587302,0.47296445977717,0,0,0,0.564727018627814,1.91034305040492,1.12361742222542,0.306083892370903,1.60464513538047,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0.580418477257168,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,3.63239701580021,2.57794345191295,0.632924774881769,0.845021145247767,0.212604299965044,0.209658645508376,0.44931452458598,0.150176892841506,0.48217676009124,0.285012743741249,0.79566670879636,0.730656615058536,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,1.17447437874188,0.764546456250458,1.32171328579026,3.36305137788922,3.16060901730092,125.304123562512,79.7811848380804,85.3246220847963,49.8215756264221,56.3845521276111,42.1368547103913,46.7584148178987,42.8930259007918,41.8340388614269,49.6235923867311,73.9294548078493,45.4724185026147,45.7808903410771,53.7711948054021,35.0964522588027,61.1484510900961,96.5345526185013,89.0910957538745,79.4469980917824,49.1762547307437,53.2676486106671,63.2274499688039,116.642078020991,45.2362888340217,29.9498388773953,31.3649174667963,52.7012916772205,58.2339080752604,41.2271397622741,70.559621109117,40.2352718491313,54.6354274139025,37.976507801258,63.2882644967832,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.81605012320082,0,0,5.19275829847493,7.31344896656922,3.72282289452822,14.3094374583205,16.5878524126237,11.5151825412165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,15.511210565933,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,76.8145792981492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,0.891786973732369,0,0,0,0,0,0,2.95597942737566,1.14462964217194,0.621984346622316,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,2.4658731678576,32.3130446731161,32.3441362289276,33.2408463964548,0,0,0,0,0,10.4860983352606,11.966458368161,25.6937618330342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.6131445421842,44.6528395694537,41.9439302167536,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.522870902049801,0,0,0,2.06082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.211107635297664,0,0,0,0,2.68120910214315,0,1.97701981631236,0,0,0,0,21.3127995877511,13.7634697285628,35.3181256047981,44.072878459691,34.1430686661541,22.0480925805524,17.2810059916197,26.1731308177109,0,0,0,0,0,53.427524354659,5.42049327277996,6.38653988585013,3.25559129225023,46.7798617819781,0.649243880549111,1.96558024679421,0.228234679033192,5.32711645628279,2.50634477090067,1.01575066680962,0.1605880751037,0.80719882876419,1.70338495076131,3.09154810280188,3.37964840739304,3.13146551049382,2.33588798396672,0.390776190804081,0,3.69262196843137,2.16364542780786,3.3307196799782,1.4098700508785,0,0.586032717087576,0,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,2.59022384726391,24.8655523978033,0,0,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,3.55116260292961,7.18449277040819,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,1.23120413606075,0,0,0,0,0,0,0,25.5483245489341,0.627921025580099,1.49590513710141,8.57263510345287,8.03856390702732,7.71979300088876,0,1.11255605286265,0,0,0,0.216388639742091,1.99052386215701,3.62676014463691,7.94339188413713,0,0,0,0.202203398942031,0,0,0,0,0,0,4.83962864194656,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.45483524732629,0,0,0,0,0.0633107959558787,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,1.27746588066972,0,0,1.11712960508902,0.687481272035051,0,0,0,0.446342914883745,0.873385142327441,0,1.16495949527454,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,1.1248694577575,0,0.121499113316049,0,1.10327990218877,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,1.32506888912221,0.258565912723101,0.26446520348538,0,0,9.61086713109252,1.88645166119599,7.87054205159671,25.8006331342214,0,0,1.91502377331055,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.92290463259083,2.5244319659539,2.944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| |||
|short_description=p4@FYB | |||
}} |
Revision as of 05:09, 22 January 2014
Short description: | p4@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FYB_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -9bp_to_ENST00000515010, uc003jls.2_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.44e-38 | 168 |
hematopoietic cell | 1.13e-34 | 177 |
hematopoietic oligopotent progenitor cell | 1.23e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-31 | 161 |
leukocyte | 6.51e-28 | 136 |
mature alpha-beta T cell | 6.48e-25 | 18 |
alpha-beta T cell | 6.48e-25 | 18 |
immature T cell | 6.48e-25 | 18 |
mature T cell | 6.48e-25 | 18 |
immature alpha-beta T cell | 6.48e-25 | 18 |
T cell | 9.90e-25 | 25 |
pro-T cell | 9.90e-25 | 25 |
myeloid cell | 4.61e-19 | 108 |
common myeloid progenitor | 4.61e-19 | 108 |
nongranular leukocyte | 3.60e-17 | 115 |
CD8-positive, alpha-beta T cell | 7.56e-16 | 11 |
hematopoietic lineage restricted progenitor cell | 3.86e-15 | 120 |
lymphoid lineage restricted progenitor cell | 3.43e-12 | 52 |
lymphocyte | 8.32e-12 | 53 |
common lymphoid progenitor | 8.32e-12 | 53 |
granulocyte | 2.97e-10 | 8 |
CD4-positive, alpha-beta T cell | 6.07e-10 | 6 |
dendritic cell | 1.18e-09 | 10 |
myeloid leukocyte | 1.39e-09 | 72 |
conventional dendritic cell | 1.50e-07 | 8 |
blood cell | 5.87e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-14 | 98 |
blood island | 1.16e-14 | 98 |
hemolymphoid system | 7.05e-14 | 108 |
blood | 5.65e-12 | 15 |
haemolymphatic fluid | 5.65e-12 | 15 |
organism substance | 5.65e-12 | 15 |
immune system | 2.28e-07 | 93 |
hemopoietic organ | 2.84e-07 | 7 |
immune organ | 2.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.35e-12 | 39 |
myeloid leukemia | 2.51e-11 | 31 |
hematologic cancer | 4.83e-10 | 51 |
immune system cancer | 4.83e-10 | 51 |