FFCP PHASE1:Hg19::chr5:76114796..76114838,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3538 | |||
|TSSclassifier=strong | |||
|UniProt=P55085,Q53XJ8 | |||
|association_with_transcript=0bp_to_ENST00000296677,NM_005242,uc003keo.2_5end | |||
|description=CAGE_peak_3_at_F2RL1_5end | |||
|id=chr5:76114796..76114838,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.72e-21!248;CL:0000220!7.93e-21!246;CL:0000066!4.55e-17!254;CL:0000222!3.76e-12!119;CL:0002139!4.08e-10!24;CL:0000192!5.19e-10!42;CL:0000514!5.19e-10!42;CL:0000393!7.66e-10!60;CL:0000211!7.66e-10!60;CL:0000183!6.55e-09!59;CL:0000187!8.39e-09!54;CL:0000359!1.33e-08!32;CL:0000071!3.21e-08!18;CL:0002546!3.21e-08!18;CL:0000115!4.49e-08!35;CL:0000223!6.35e-08!59;CL:0002076!9.45e-08!43;CL:0002078!1.15e-07!44;CL:0000680!2.23e-07!57;CL:0000056!2.23e-07!57;CL:0000355!2.23e-07!57;CL:1000497!8.78e-07!18;CL:0002518!8.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.65e-11;24!CL:0000071;2.97e-09;18!CL:0000359;3.03e-09;32!CL:0000115;2.38e-08;36!CL:0000192;3.89e-08;43!CL:1000497;8.24e-08;17!CL:0002518;8.24e-08;17!CL:1000507;1.90e-07;10!CL:1000494;1.90e-07;10!CL:1000449;5.93e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.97e-25,250;CL:0000066,1.15e-17,253;CL:0000222,1.23e-13,121;CL:0002139,5.64e-11,24;CL:0000192,7.00e-11,43;CL:0000514,7.00e-11,43;CL:0000393,2.96e-10,61;CL:0000211,2.96e-10,61;CL:0000115,1.66e-09,36;CL:0000359,1.71e-09,32;CL:0000187,2.20e-09,55;CL:0000071,6.85e-09,18;CL:0002546,6.85e-09,18;CL:0002078,9.44e-09,45;CL:0000223,1.09e-08,58;CL:0002076,1.51e-08,42;CL:0000680,4.75e-08,58;CL:0000056,4.75e-08,58;CL:0000355,4.75e-08,58;CL:1000497,8.60e-08,17;CL:0002518,8.60e-08,17;CL:1000507,1.97e-07,10;CL:1000494,1.97e-07,10;CL:1000449,6.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.97e-09;18!CL:0000514;3.89e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!6.95e-09!14;DOID:193!1.61e-08!29;DOID:120!6.69e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.45e-09;14!DOID:193;4.26e-08;29!DOID:120;2.25e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-09,14;DOID:193,4.45e-08,29;DOID:120,2.06e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.99e-24!118;UBERON:0004535!8.31e-21!110;UBERON:0001009!5.88e-20!113;UBERON:0000477!3.59e-19!286;UBERON:0002049!4.18e-19!79;UBERON:0007798!4.18e-19!79;UBERON:0004111!1.35e-18!241;UBERON:0000481!1.40e-17!347;UBERON:0000490!1.17e-16!138;UBERON:0000119!2.60e-16!312;UBERON:0000483!4.76e-16!309;UBERON:0000055!4.14e-15!69;UBERON:0000922!5.86e-15!612;UBERON:0004872!6.47e-15!84;UBERON:0000923!1.22e-13!604;UBERON:0005291!1.22e-13!604;UBERON:0006598!1.22e-13!604;UBERON:0002532!1.22e-13!604;UBERON:0000480!1.28e-13!626;UBERON:0000467!1.78e-13!625;UBERON:0000025!1.98e-13!194;UBERON:0002050!2.29e-13!605;UBERON:0005423!2.29e-13!605;UBERON:0001981!4.62e-13!60;UBERON:0007500!4.62e-13!60;UBERON:0004537!4.62e-13!60;UBERON:0006965!4.62e-13!60;UBERON:0000468!6.40e-13!659;UBERON:0001048!1.72e-12!168;UBERON:0001637!7.19e-11!42;UBERON:0003509!7.19e-11!42;UBERON:0004572!7.19e-11!42;UBERON:0003104!1.34e-10!238;UBERON:0009142!1.34e-10!238;UBERON:0000487!4.74e-10!22;UBERON:0000466!1.11e-09!126;UBERON:0003103!1.58e-09!69;UBERON:0006554!2.40e-09!44;UBERON:0001008!2.50e-09!45;UBERON:0005256!6.48e-09!143;UBERON:0002100!1.16e-08!216;UBERON:0001986!3.21e-08!18;UBERON:0004638!3.21e-08!18;UBERON:0004852!3.21e-08!18;UBERON:0004573!3.64e-08!33;UBERON:0004571!3.64e-08!33;UBERON:0004119!5.16e-08!169;UBERON:0000925!5.16e-08!169;UBERON:0006595!5.16e-08!169;UBERON:0000464!5.45e-08!104;UBERON:0000926!7.12e-08!448;UBERON:0004120!7.12e-08!448;UBERON:0006603!7.12e-08!448;UBERON:0006914!1.82e-07!25;UBERON:0001007!3.63e-07!155;UBERON:0001555!3.63e-07!155;UBERON:0007026!3.63e-07!155;UBERON:0003886!5.16e-07!63;UBERON:0005177!5.47e-07!107;UBERON:0000058!8.01e-07!26;UBERON:0000475!8.17e-07!365;UBERON:0002553!8.25e-07!70;UBERON:0000992!8.30e-07!13;UBERON:0005911!9.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.29e-11;22!UBERON:0003914;3.93e-11;74!UBERON:0000490;5.53e-10;33!UBERON:0002049;1.56e-09;75!UBERON:0007798;1.56e-09;75!UBERON:0001637;2.68e-09;42!UBERON:0003509;2.68e-09;42!UBERON:0004572;2.68e-09;42!UBERON:0006554;2.91e-09;30!UBERON:0001008;2.91e-09;30!UBERON:0004638;2.97e-09;18!UBERON:0001986;2.97e-09;18!UBERON:0004852;2.97e-09;18!UBERON:0000055;4.22e-09;65!UBERON:0007500;1.03e-08;56!UBERON:0001981;1.03e-08;56!UBERON:0004537;1.03e-08;56!UBERON:0004573;1.36e-08;33!UBERON:0004571;1.36e-08;33!UBERON:0006914;1.39e-08;25!UBERON:0002113;3.71e-08;24!UBERON:0011143;3.71e-08;24!UBERON:0000025;9.64e-08;93!UBERON:0004211;1.90e-07;10!UBERON:0009773;1.90e-07;10!UBERON:0001231;1.90e-07;10!UBERON:0004810;1.90e-07;10!UBERON:0004535;3.33e-07;109!UBERON:0000992;5.57e-07;13!UBERON:0006555;5.93e-07;15!UBERON:0004819;5.93e-07;15!UBERON:0001285;5.93e-07;15!UBERON:0007684;5.93e-07;15!UBERON:0000019;9.86e-07;19!UBERON:0000047;9.86e-07;19!UBERON:0004088;9.86e-07;19!UBERON:0010230;9.86e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.32e-25,117;UBERON:0004535,9.78e-22,109;UBERON:0001009,5.48e-21,112;UBERON:0002049,2.86e-20,78;UBERON:0007798,2.86e-20,78;UBERON:0004872,6.22e-16,83;UBERON:0000055,6.68e-16,68;UBERON:0004111,4.43e-15,240;UBERON:0000490,1.78e-14,148;UBERON:0007500,5.80e-14,59;UBERON:0001981,5.80e-14,59;UBERON:0004537,5.80e-14,59;UBERON:0006965,5.80e-14,59;UBERON:0000119,1.26e-13,309;UBERON:0000483,2.28e-13,306;UBERON:0000922,6.13e-12,592;UBERON:0001637,7.24e-12,42;UBERON:0003509,7.24e-12,42;UBERON:0004572,7.24e-12,42;UBERON:0003104,7.91e-12,160;UBERON:0009142,7.91e-12,160;UBERON:0000487,6.65e-11,22;UBERON:0005423,6.86e-11,581;UBERON:0000025,1.05e-10,192;UBERON:0001048,2.12e-10,160;UBERON:0006554,8.88e-10,47;UBERON:0001008,9.05e-10,48;UBERON:0003103,9.44e-10,68;UBERON:0002100,1.42e-09,199;UBERON:0004638,6.85e-09,18;UBERON:0001986,6.85e-09,18;UBERON:0004852,6.85e-09,18;UBERON:0004573,6.88e-09,33;UBERON:0004571,6.88e-09,33;UBERON:0006914,2.44e-08,25;UBERON:0002113,6.53e-08,26;UBERON:0003918,6.53e-08,26;UBERON:0011143,6.53e-08,26;UBERON:0005095,6.53e-08,26;UBERON:0007687,6.53e-08,26;UBERON:0004810,1.97e-07,10;UBERON:0005177,2.02e-07,101;UBERON:0005256,2.26e-07,122;UBERON:0002050,4.39e-07,564;UBERON:0000992,5.58e-07,13;UBERON:0005172,5.77e-07,54;UBERON:0005173,5.77e-07,54;UBERON:0004211,6.31e-07,15;UBERON:0009773,6.31e-07,15;UBERON:0001231,6.31e-07,15;UBERON:0001285,6.31e-07,15;UBERON:0007684,6.31e-07,15;UBERON:0004208,6.31e-07,15;UBERON:0004119,7.74e-07,160;UBERON:0000925,7.74e-07,160;UBERON:0006595,7.74e-07,160 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,8.84642171405432,2.09340350391728,2.83973783769224,2.63766978228454,4.82688776544182,3.64537113300707,7.39557661096953,6.02694528023977,5.11217063271161,11.7103871709722,2.33930010345897,4.08001382488506,3.13454721478088,15.7429792922081,15.6036844583088,13.4330624366439,0,0,0,0,0,0.619264493264304,2.75826367343678,2.71085326900425,1.84877005083394,0,0,5.5784083473621,0,0,1.73608696572681,0,0,0,1.45398238779565,0.755751887377619,1.69808842831471,0.464858073811369,1.23350366406548,0,0.28769239232215,0.512321413058201,1.18241114944293,1.03423704220986,1.93645405075148,1.35426486594342,0.376484679085209,0,0,0,0,0.639337125799041,1.31940520074686,0.199463657621632,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.868755378820466,0,0,0,0.422510572623884,0.637812899895131,0.838634582033504,1.68492946719743,2.25265339262259,2.57160938715328,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,3.96513985737078,1.12101712596307,3.423993102076,1.180258620683,0.786021525498329,0.616804496998528,1.5046784585161,3.2592226663359,1.4203434172042,5.84480185223734,0.334231370655521,0.294605907474837,0.443067789167242,0.270803863765016,0.896639238079726,0.910415432919148,0.328875809207352,0.552700035571697,0,0.889719378972363,0.535081656179426,2.09071047609954,0.679856056185397,0.383220493601921,1.71813722741315,0.253019692019503,0.318565414324097,1.95325036156926,0,1.05402583354441,2.17577238962511,2.49861453104692,2.13099526839615,0.821127996921047,0.201606743224732,0,0.434473211648397,0,6.03630773733273,12.786256184353,0,0,0,0.795285947051099,0.486634870302636,5.2939497611878,9.97782288581538,7.46595678391571,1.30979075497713,2.91436230634034,1.85392221392215,0.324547393654683,0,0,0,0,0,4.17401055470081,5.16140757063675,7.28995053375948,2.26123176769604,7.1314904155684,4.40188867104108,5.01587919688345,2.32575083252396,2.49036383880697,6.6944122552934,10.876391561947,13.6848979029332,9.51842024437861,9.55924008899259,12.1521292182264,5.00078478390847,3.14341121676638,3.26573293401634,10.7321646226118,9.49265659568129,10.0760959161724,0,3.87780264148325,4.79703457356788,0,1.39293562831038,0.264818361626438,2.86836620748814,2.12801029319014,1.68203280042692,16.0123493594557,9.8667019366864,4.97937656639626,8.08264032418128,8.00963325255948,5.2975099675726,13.82822218752,3.04617861383936,0,0,0.448346041655403,0.469737994575059,0.647491777472526,0.421352420106746,1.42907919878425,6.63305313483547,1.44656093646072,0,0,6.37112953356618,0.718618141816238,5.72342787443825,2.12701483782339,1.93944880838928,0,0,0.150238058906597,10.889489583362,0.179389635688862,0,0,2.10063767259082,0.721367704669072,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0.710019185033229,0.10075209822764,1.86516651541536,6.95739071387869,7.0913991353617,4.30206893083506,3.78118489001746,4.10842281796604,4.76395165765025,3.31715376049185,6.30802127189071,3.28479623168247,0,0,0,0,0,0.828147600278907,0.337169380156203,0.723033089650446,1.21323370005633,0.217879444092406,0.71181185733329,0.674156540800822,1.17732879075208,0.769494313892781,1.4763109092493,4.20725321410337,9.8777762719536,5.88034845542168,0,6.87979051674338,0.590789906681404,0,4.42758378755209,10.6372042385086,6.91426798074341,4.49607013030478,7.03702806881416,6.66636805141413,3.25808305310325,10.3993478527958,8.6598805215164,6.26024186865415,6.34006948873437,17.1796072835678,6.94478268864916,9.89321591619911,0.790204397959275,0.858486162094873,0,0,0.148631162288728,5.62403003920662,5.03946384596579,4.53680311175637,6.17953806649653,6.39394664730716,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,1.68196626518041,2.61576041299968,2.42016343209135,5.30014034606889,0,0.845302752556,8.24408161413099,2.08014873822732,0.514414748524284,1.41849132023278,1.3321108950805,3.86040582876998,0,0,0.65147236858747,2.13235169245527,3.95975936466715,3.31583314765545,6.10073421020206,8.29775826811074,0,0,0,3.35474797688216,3.44585807502342,2.85273810081437,0,0,0.179060963239896,0,0,0,0.385029108839245,2.7950408664471,5.20559415430487,0.773288812777695,5.69555302136786,7.01732626818479,6.74106321552464,2.99161459204025,21.1351911852378,3.31267027641678,3.00102312635806,5.42530047399471,0.623912584592421,0.356857977594324,0,0,2.10662269809403,0,1.03473071292505,4.64957918974806,5.7154442247928,2.95404289191482,0.979005787313703,0,0.206768026122887,0.647142602455851,0.853820462427555,1.5156378572313,0,1.81434175997808,0,0,0,0.640695746278505,0.511707249066704,0.804269605718038,0,8.94416224055402,13.3171293984845,7.39144404124282,18.1739050214267,4.88083589531829,2.77976734060731,4.41114234667227,3.40699659062816,4.24813458209045,3.27764102412091,0.262248829918848,8.57279264524082,14.7099293869432,8.62784746094541,5.84556898613043,20.371464376325,0,2.89159298970077,7.34114114747274,4.62681758070868,8.12839312631558,6.02027728625824,14.0181950174771,7.47968408035852,15.895107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| |||
|short_description=p3@F2RL1 | |||
}} |
Revision as of 06:03, 22 January 2014
Short description: | p3@F2RL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_F2RL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296677, NM_005242, uc003keo.2_5end |
EntrezGene: | F2RL1 |
HGNC: | 3538 |
UniProt: | P55085Q53XJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.97e-25 | 250 |
epithelial cell | 1.15e-17 | 253 |
mesodermal cell | 1.23e-13 | 121 |
endothelial cell of vascular tree | 5.64e-11 | 24 |
smooth muscle cell | 7.00e-11 | 43 |
smooth muscle myoblast | 7.00e-11 | 43 |
electrically responsive cell | 2.96e-10 | 61 |
electrically active cell | 2.96e-10 | 61 |
endothelial cell | 1.66e-09 | 36 |
vascular associated smooth muscle cell | 1.71e-09 | 32 |
muscle cell | 2.20e-09 | 55 |
blood vessel endothelial cell | 6.85e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.85e-09 | 18 |
meso-epithelial cell | 9.44e-09 | 45 |
endodermal cell | 1.09e-08 | 58 |
endo-epithelial cell | 1.51e-08 | 42 |
muscle precursor cell | 4.75e-08 | 58 |
myoblast | 4.75e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.75e-08 | 58 |
kidney cell | 8.60e-08 | 17 |
kidney epithelial cell | 8.60e-08 | 17 |
kidney tubule cell | 1.97e-07 | 10 |
nephron tubule epithelial cell | 1.97e-07 | 10 |
epithelial cell of nephron | 6.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-09 | 14 |
reproductive organ cancer | 4.45e-08 | 29 |
female reproductive organ cancer | 2.06e-07 | 27 |