FFCP PHASE1:Hg19::chr6:31554826..31554845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=strong | |||
|UniProt=Q5STA6 | |||
|association_with_transcript=0bp_to_ENST00000376089_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_4_at_LST1_5end | |||
|id=chr6:31554826..31554845,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.09e-61!172;CL:0000566!4.09e-61!172;CL:0002032!4.06e-57!165;CL:0000837!4.06e-57!165;CL:0000988!4.44e-56!182;CL:0000763!5.85e-55!112;CL:0000049!5.85e-55!112;CL:0000738!5.53e-54!140;CL:0002009!6.46e-48!65;CL:0000766!2.47e-47!76;CL:0002087!5.64e-46!119;CL:0002194!1.02e-45!63;CL:0000576!1.02e-45!63;CL:0000040!1.02e-45!63;CL:0000559!1.02e-45!63;CL:0000557!5.12e-43!71;CL:0002031!1.17e-42!124;CL:0002057!7.97e-41!42;CL:0000839!5.96e-40!70;CL:0000860!9.17e-37!45;CL:0002393!2.50e-10!9;CL:0002397!2.50e-10!9;CL:0000134!4.38e-10!358;CL:0000451!1.48e-09!10;CL:0002320!3.07e-09!365;CL:0000990!4.05e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-43;33!CL:0002057;1.64e-43;33!CL:0000473;5.37e-43;39!CL:0000234;5.37e-43;39!CL:0000576;7.08e-41;48!CL:0000766;1.38e-31;69!CL:0000763;1.05e-22;100!CL:0002087;1.08e-14;104!CL:0000738;1.27e-14;136!CL:0000451;4.85e-12;10!CL:0000988;5.53e-12;177!CL:0002393;3.55e-10;6!CL:0002397;3.55e-10;6!CL:0000990;7.12e-10;8!CL:0000840;1.97e-09;5!CL:0000094;2.05e-09;8!CL:0000235;3.05e-09;6!CL:0000219;7.02e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.67e-82,108;CL:0000049,2.67e-82,108;CL:0002009,1.16e-78,61;CL:0000766,1.41e-76,72;CL:0002194,3.33e-75,59;CL:0000576,3.33e-75,59;CL:0000040,3.33e-75,59;CL:0000559,3.33e-75,59;CL:0000037,1.06e-71,168;CL:0000473,5.25e-70,48;CL:0000234,5.25e-70,48;CL:0000557,7.79e-70,67;CL:0002032,5.50e-67,161;CL:0000837,5.50e-67,161;CL:0000988,1.66e-66,177;CL:0000839,3.42e-65,66;CL:0000738,1.47e-64,136;CL:0000860,6.99e-62,42;CL:0002057,6.99e-62,42;CL:0002087,5.67e-54,115;CL:0002031,1.90e-49,120;CL:0000134,2.06e-20,354;CL:0002320,1.86e-19,361;CL:0000219,3.98e-16,386;CL:0002393,5.51e-15,9;CL:0002397,5.51e-15,9;CL:0000034,1.87e-12,441;CL:0000048,3.86e-12,427;CL:0000451,5.39e-12,10;CL:0000723,1.34e-11,433;CL:0000990,8.30e-10,8;CL:0000840,2.16e-09,5;CL:0001029,2.16e-09,5;CL:0000094,2.19e-09,8;CL:0000235,3.17e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.94e-44;42!CL:0000049;6.68e-22;108 | |||
|ontology_enrichment_disease=DOID:8692!2.74e-09!31;DOID:1240!2.87e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.54e-10;31!DOID:1240;5.41e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.05e-10,31;DOID:1240,2.10e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.09e-47!102;UBERON:0003061!7.09e-47!102;UBERON:0002193!2.11e-43!112;UBERON:0002371!2.45e-36!80;UBERON:0001474!5.39e-32!86;UBERON:0002405!8.65e-27!115;UBERON:0004765!2.76e-25!101;UBERON:0001434!2.76e-25!101;UBERON:0007023!5.78e-18!115;UBERON:0003081!2.22e-12!216;UBERON:0002204!1.42e-09!167;UBERON:0000178!1.44e-09!15;UBERON:0000179!1.44e-09!15;UBERON:0000463!1.44e-09!15;UBERON:0002384!2.08e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.97e-13;15!UBERON:0000179;6.97e-13;15!UBERON:0000463;6.97e-13;15!UBERON:0002390;8.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.81e-71,98;UBERON:0003061,1.81e-71,98;UBERON:0002193,2.05e-66,108;UBERON:0002371,3.35e-59,76;UBERON:0002405,1.64e-53,93;UBERON:0001474,2.08e-53,82;UBERON:0004765,6.80e-47,90;UBERON:0001434,3.13e-40,100;UBERON:0003081,7.81e-25,203;UBERON:0002384,3.67e-18,371;UBERON:0002204,2.26e-17,167;UBERON:0000178,7.41e-13,15;UBERON:0000179,7.41e-13,15;UBERON:0000463,7.41e-13,15;UBERON:0000926,2.25e-09,315;UBERON:0004120,2.25e-09,315;UBERON:0006603,2.25e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.0821005894499457,0.472264687882075,51.1373559903575,16.5046641181801,37.6203179658065,0,0,0,0,0,0.293600439334847,27.6997704265939,17.8484558248426,16.9268479158364,3.58264758783879,0.971680998056939,2.83333124397605,17.5931868923273,24.5619363397726,28.6249192201623,25.1023359858139,21.7918980651568,31.2803434604055,24.7415457397049,27.6653563051429,37.600674552285,19.9952494827239,8.39130088658974,24.3767675869815,22.9655654241978,18.5576182039335,30.3376704000864,22.038040250705,19.2557416245656,28.7701706609569,24.7388475140037,26.528666463677,33.6717552920828,27.2796684310869,15.8867862913519,21.7987787148451,29.396093835039,31.8104580236323,49.0846789033564,18.7673845816344,17.3090488914155,30.6968515817658,147.456189845735,152.862491674866,131.875288024768,65.9369064829926,59.4700495652365,32.4665685128102,261.926711498207,202.895010743072,167.868357309699,0,1.09227722252426,0,2.13365111283254,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,0,3.96513985737078,7.8471198817415,2.63384084775077,0.196709770113833,0.393010762749165,0,0.334372990781356,0.32592226663359,0,0,1.44833593950726,0,0,0,0.25618263945135,0.650296737799391,1.47994114143309,4.14525026678773,5.21645554323094,0,0,0,4.53237370790265,0.766440987203842,0.34362744548263,0.253019692019503,0.95569624297229,0,0.950452044448374,5.57127940587759,2.8157054453972,3.74792179657038,4.02521328474829,0.821127996921047,1.41124720257313,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,11.0346113842592,10.0995247633575,24.0653908539146,2.14641561874808,5.71994910780128,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3094960102945,31.022421131866,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,21.1746625235162,17.5503198854428,18.2816329615136,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,21.0947978401493,23.1917333431335,0,0,0,0,0,0,0,3.34952292343276,0.431255149719035,1.66845947163673,0,0,0,0,0,12.7331194071021,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1955862988141,18.1199928687638,13.2342171676271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.22386941009813,0,0,0,0,34.5064374277875,22.1744790071289,18.2287099895732,16.6762242820452,18.0999400157925,24.6419858253233,20.5211946150484,20.621254583651,0,0,0,0,0,0,0,5.18906365725323,22.0231175652222,73.8740803706351,0.324621940274555,0,1.14117339516596,1.09675927041116,2.50634477090067,19.1299708915812,12.3652817829849,0.403599414382095,0,1.37402137902306,2.15068535015921,2.90778940260141,1.83534055883099,4.88470238505101,0,0,7.57275899732753,1.99843180798692,1.4098700508785,0,0.293016358543788,0,0.111443384277478,0,0,1.18785872333055,0.307160702099232,0,0.422008249231538,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,2.55786185113436,0,16.7638164642858,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,1.5991043280559,1.02193298195737,1.2558420511602,1.66211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.741412462787447,1.60515529459758,0.468528891450678,0,0,0,0,1.20990716048664,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0.126621591911757,0,0.160317640503067,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,1.50595916781192,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.272406812223151,0,0,0,215.749961997889,309.52078182318,0.182248669974074,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,1.61207457045891,0,0,0.79339561045614,0,0,1.17466153824464,0.471612915298998,1.24271716604159,3.47316215268366,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,1.10929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,2.25870228532717,2.12635012532597,0,0,0,5.19967229222818,6.18812032226017,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,1.11743701340006,0.205116364240755,0,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0,0,0.672567444437648,0,0.227662191351298,1.33053555243958,0,0,0.135939465953663,0.131545547125698,0,0,0.7064378356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| |||
|short_description=p4@LST1 | |||
}} |
Revision as of 11:02, 22 January 2014
Short description: | p4@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000376089_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.81e-71 | 98 |
blood island | 1.81e-71 | 98 |
hemolymphoid system | 2.05e-66 | 108 |
bone marrow | 3.35e-59 | 76 |
immune system | 1.64e-53 | 93 |
bone element | 2.08e-53 | 82 |
skeletal element | 6.80e-47 | 90 |
skeletal system | 3.13e-40 | 100 |
lateral plate mesoderm | 7.81e-25 | 203 |
connective tissue | 3.67e-18 | 371 |
musculoskeletal system | 2.26e-17 | 167 |
blood | 7.41e-13 | 15 |
haemolymphatic fluid | 7.41e-13 | 15 |
organism substance | 7.41e-13 | 15 |
mesoderm | 2.25e-09 | 315 |
mesoderm-derived structure | 2.25e-09 | 315 |
presumptive mesoderm | 2.25e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.05e-10 | 31 |
leukemia | 2.10e-08 | 39 |