FFCP PHASE1:Hg19::chr7:27219754..27219759,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=116bp_to_uc003syw.3_5end | |||
|description=CAGE_peak_16_at_HOXA10_5end | |||
|id=chr7:27219754..27219759,- | |||
|ontology_enrichment_celltype=CL:1000449!2.93e-29!16;CL:1000507!1.38e-27!12;CL:1000494!1.38e-27!12;CL:1000497!1.12e-25!18;CL:0002518!1.12e-25!18;CL:0002681!2.74e-20!13;CL:0002584!2.74e-20!13;CL:0000239!8.46e-11!3;CL:1000615!8.46e-11!3;CL:0002306!8.46e-11!3;CL:0002622!1.10e-09!3;CL:0002620!1.85e-09!23;CL:1000612!1.85e-08!7;CL:1000746!1.85e-08!7;CL:0002588!4.67e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.29e-57;10!CL:1000494;7.29e-57;10!CL:1000449;2.53e-49;15!CL:1000497;1.90e-43;17!CL:0002518;1.90e-43;17!CL:0000650;4.38e-25;2!CL:1000500;4.38e-25;2!CL:1000618;4.38e-25;2!CL:1001318;4.38e-25;2!CL:0002173;4.38e-25;2!CL:0002681;1.52e-24;12!CL:0002584;1.52e-24;12!CL:1000746;4.30e-16;7!CL:1000612;4.30e-16;7!CL:0000669;4.78e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.62e-57,10;CL:1000494,7.62e-57,10;CL:1000449,2.61e-49,15;CL:1000497,1.96e-43,17;CL:0002518,1.96e-43,17;CL:0000650,4.38e-25,2;CL:1000500,4.38e-25,2;CL:1000618,4.38e-25,2;CL:1001318,4.38e-25,2;CL:0002173,4.38e-25,2;CL:0002681,1.60e-24,12;CL:0002584,1.60e-24,12;CL:1000746,4.30e-16,7;CL:1000612,4.30e-16,7;CL:0000669,4.78e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004211!2.93e-29!16;UBERON:0001285!2.93e-29!16;UBERON:0007684!2.93e-29!16;UBERON:0003220!2.93e-29!16;UBERON:0004208!2.93e-29!16;UBERON:0009773!1.38e-27!12;UBERON:0001231!1.38e-27!12;UBERON:0004810!1.38e-27!12;UBERON:0006555!2.31e-27!17;UBERON:0005103!2.31e-27!17;UBERON:0000083!2.31e-27!17;UBERON:0009201!2.31e-27!17;UBERON:0004819!2.31e-27!17;UBERON:0006553!2.31e-27!17;UBERON:0003074!2.31e-27!17;UBERON:0003060!2.31e-27!17;UBERON:0002113!1.05e-25!27;UBERON:0003918!1.05e-25!27;UBERON:0005095!1.05e-25!27;UBERON:0007687!1.05e-25!27;UBERON:0000080!1.12e-25!18;UBERON:0002120!1.12e-25!18;UBERON:0004875!1.12e-25!18;UBERON:0005721!1.12e-25!18;UBERON:0005754!1.12e-25!18;UBERON:0007297!1.12e-25!18;UBERON:0006554!1.62e-25!44;UBERON:0001008!7.88e-25!45;UBERON:0004876!8.17e-23!20;UBERON:0003064!5.58e-22!37;UBERON:0001737!5.79e-22!9;UBERON:0003887!1.38e-21!21;UBERON:0000489!4.51e-21!32;UBERON:0001225!2.74e-20!13;UBERON:0008987!2.74e-20!13;UBERON:0000058!7.14e-17!26;UBERON:0001851!3.91e-16!16;UBERON:0000353!4.47e-15!17;UBERON:0005172!4.72e-14!55;UBERON:0005173!4.72e-14!55;UBERON:0002417!3.02e-12!61;UBERON:0000916!3.02e-12!61;UBERON:0006853!8.46e-11!3;UBERON:0007685!8.46e-11!3;UBERON:0004134!8.46e-11!3;UBERON:0003104!9.98e-10!238;UBERON:0009142!9.98e-10!238;UBERON:0001557!1.12e-09!19;UBERON:0000074!1.85e-08!7;UBERON:0001229!1.85e-08!7;UBERON:0001230!1.85e-08!7;UBERON:0005749!1.85e-08!7;UBERON:0004199!1.85e-08!7;UBERON:0004209!1.85e-08!7;UBERON:0004198!1.85e-08!7;UBERON:0003103!8.55e-08!69;UBERON:0005177!6.98e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.29e-57;10!UBERON:0009773;7.29e-57;10!UBERON:0001231;7.29e-57;10!UBERON:0004810;7.29e-57;10!UBERON:0006555;2.53e-49;15!UBERON:0004819;2.53e-49;15!UBERON:0001285;2.53e-49;15!UBERON:0007684;2.53e-49;15!UBERON:0002113;9.58e-48;24!UBERON:0011143;9.58e-48;24!UBERON:0000489;2.48e-39;29!UBERON:0006554;5.52e-38;30!UBERON:0001008;5.52e-38;30!UBERON:0003567;4.38e-25;2!UBERON:0003838;4.38e-25;2!UBERON:0003586;4.38e-25;2!UBERON:0005169;4.38e-25;2!UBERON:0002321;4.38e-25;2!UBERON:0005215;4.38e-25;2!UBERON:0002303;4.38e-25;2!UBERON:0002319;4.38e-25;2!UBERON:0001225;1.52e-24;12!UBERON:0008987;1.52e-24;12!UBERON:0001851;1.21e-19;15!UBERON:0000353;1.21e-19;15!UBERON:0005172;1.39e-16;52!UBERON:0005173;1.39e-16;52!UBERON:0000074;4.30e-16;7!UBERON:0001229;4.30e-16;7!UBERON:0005795;3.33e-13;1!UBERON:0003891;4.78e-13;4!UBERON:0002417;5.15e-12;58!UBERON:0000916;5.15e-12;58!UBERON:0003103;6.90e-12;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.62e-57,10;UBERON:0004211,2.61e-49,15;UBERON:0009773,2.61e-49,15;UBERON:0001231,2.61e-49,15;UBERON:0001285,2.61e-49,15;UBERON:0007684,2.61e-49,15;UBERON:0004208,2.61e-49,15;UBERON:0006555,3.45e-46,16;UBERON:0004819,3.45e-46,16;UBERON:0002113,6.37e-44,26;UBERON:0003918,6.37e-44,26;UBERON:0011143,6.37e-44,26;UBERON:0005095,6.37e-44,26;UBERON:0007687,6.37e-44,26;UBERON:0000489,1.15e-36,31;UBERON:0003567,4.38e-25,2;UBERON:0003838,4.38e-25,2;UBERON:0003586,4.38e-25,2;UBERON:0005169,4.38e-25,2;UBERON:0002321,4.38e-25,2;UBERON:0005215,4.38e-25,2;UBERON:0002303,4.38e-25,2;UBERON:0002319,4.38e-25,2;UBERON:0001225,1.60e-24,12;UBERON:0008987,1.60e-24,12;UBERON:0006554,8.46e-24,47;UBERON:0001008,2.80e-23,48;UBERON:0005172,1.47e-20,54;UBERON:0005173,1.47e-20,54;UBERON:0001851,1.26e-19,15;UBERON:0000353,1.26e-19,15;UBERON:0002417,2.20e-18,60;UBERON:0000916,2.20e-18,60;UBERON:0010532,4.30e-16,7;UBERON:0000074,4.30e-16,7;UBERON:0001229,4.30e-16,7;UBERON:0001230,4.30e-16,7;UBERON:0003220,4.30e-16,7;UBERON:0005749,4.30e-16,7;UBERON:0004199,4.30e-16,7;UBERON:0004209,4.30e-16,7;UBERON:0004198,4.30e-16,7;UBERON:0003103,4.46e-16,68;UBERON:0005103,3.71e-14,8;UBERON:0000083,3.71e-14,8;UBERON:0009201,3.71e-14,8;UBERON:0006553,3.71e-14,8;UBERON:0003074,3.71e-14,8;UBERON:0003060,3.71e-14,8;UBERON:0003891,4.78e-13,4;UBERON:0000080,1.19e-12,9;UBERON:0002120,1.19e-12,9;UBERON:0004875,1.19e-12,9;UBERON:0005721,1.19e-12,9;UBERON:0005754,1.19e-12,9;UBERON:0007297,1.19e-12,9;UBERON:0004876,1.89e-10,11;UBERON:0005177,2.08e-10,101;UBERON:0003887,1.27e-09,12;UBERON:0009569,2.95e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0.744467425326359,0.168776332241266,0,0,0.276149695926898,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.441175890929576,0.217879444092406,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,1.32845119707087,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0.902399225814824,1.07821471946181,6.27479815341484,1.46139224653261,2.32213583564327,0,0,0.863663664408557,3.08454505380579,4.06419656315779,4.01351819083883,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,1.99052386215701,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,2.07376382794494,0,0,0,0,1.70765727617876,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,2.20309270166992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84827324821017,0,0,0 | |||
|short_description=p16@HOXA10 | |||
}} |
Revision as of 16:13, 22 January 2014
Short description: | p16@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_uc003syw.3_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.62e-57 | 10 |
nephron tubule epithelial cell | 7.62e-57 | 10 |
epithelial cell of nephron | 2.61e-49 | 15 |
kidney cell | 1.96e-43 | 17 |
kidney epithelial cell | 1.96e-43 | 17 |
mesangial cell | 4.38e-25 | 2 |
kidney interstitial cell | 4.38e-25 | 2 |
juxtaglomerular complex cell | 4.38e-25 | 2 |
renal interstitial pericyte | 4.38e-25 | 2 |
extraglomerular mesangial cell | 4.38e-25 | 2 |
kidney cortical cell | 1.60e-24 | 12 |
renal cortical epithelial cell | 1.60e-24 | 12 |
glomerular cell | 4.30e-16 | 7 |
kidney corpuscule cell | 4.30e-16 | 7 |
pericyte cell | 4.78e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.42e-07 | 2 |