FFCP PHASE1:Hg19::chr8:145703355..145703473,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529283_5end | |||
|description=CAGE_peak_1_at_PPP1R16A_5end | |||
|id=chr8:145703355..145703473,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.07e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.68e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.09e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.95e-14!106;DOID:14566!1.26e-13!239;DOID:0050687!1.67e-13!143;DOID:162!2.95e-13!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.95e-14,106;DOID:14566,1.27e-13,239;DOID:0050687,1.67e-13,143;DOID:162,2.98e-13,235 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.66e-12!57;UBERON:0005068!6.66e-12!57;UBERON:0006241!6.66e-12!57;UBERON:0007135!6.66e-12!57;UBERON:0002346!7.14e-11!90;UBERON:0002616!1.17e-10!59;UBERON:0000073!1.27e-10!94;UBERON:0001016!1.27e-10!94;UBERON:0001017!2.72e-10!82;UBERON:0000955!5.96e-10!69;UBERON:0006238!5.96e-10!69;UBERON:0003075!6.64e-10!86;UBERON:0007284!6.64e-10!86;UBERON:0005743!8.28e-10!86;UBERON:0002780!1.73e-09!41;UBERON:0001890!1.73e-09!41;UBERON:0006240!1.73e-09!41;UBERON:0003080!8.61e-09!42;UBERON:0000064!1.56e-08!219;UBERON:0001869!3.71e-08!32;UBERON:0002020!4.70e-08!34;UBERON:0003528!4.70e-08!34;UBERON:0001893!5.08e-08!34;UBERON:0002791!1.18e-07!33;UBERON:0008947!2.63e-07!38;UBERON:0003258!2.63e-07!38;UBERON:0003056!2.86e-07!61;UBERON:0000924!3.89e-07!173;UBERON:0006601!3.89e-07!173;UBERON:0000956!3.91e-07!25;UBERON:0000203!3.91e-07!25;UBERON:0000025!4.11e-07!194;UBERON:0002619!5.34e-07!22;UBERON:0000481!6.16e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.13e-08;53!UBERON:0002616;2.13e-08;53!UBERON:0002780;1.35e-07;41!UBERON:0001890;1.35e-07;41!UBERON:0001869;4.01e-07;32!UBERON:0000956;5.58e-07;25!UBERON:0000203;5.58e-07;25!UBERON:0001893;7.87e-07;34!UBERON:0002619;7.99e-07;22!UBERON:0002791;8.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.05e-13,53;UBERON:0002616,6.05e-13,53;UBERON:0001049,1.29e-12,56;UBERON:0005068,1.29e-12,56;UBERON:0006241,1.29e-12,56;UBERON:0007135,1.29e-12,56;UBERON:0001016,1.30e-11,89;UBERON:0002346,1.37e-11,86;UBERON:0011216,2.93e-11,223;UBERON:0001017,8.29e-11,81;UBERON:0003075,1.37e-10,82;UBERON:0007284,1.37e-10,82;UBERON:0000955,1.65e-10,68;UBERON:0006238,1.65e-10,68;UBERON:0002780,1.73e-09,41;UBERON:0001890,1.73e-09,41;UBERON:0003080,1.73e-09,41;UBERON:0006240,1.73e-09,41;UBERON:0001869,3.70e-08,32;UBERON:0003528,4.70e-08,34;UBERON:0002020,4.70e-08,34;UBERON:0001893,5.08e-08,34;UBERON:0010371,6.63e-08,104;UBERON:0003056,7.89e-08,61;UBERON:0000025,1.19e-07,192;UBERON:0002791,1.47e-07,32;UBERON:0004121,2.11e-07,171;UBERON:0000924,2.11e-07,171;UBERON:0006601,2.11e-07,171;UBERON:0008947,2.63e-07,38;UBERON:0003258,2.63e-07,38;UBERON:0000956,3.91e-07,25;UBERON:0000203,3.91e-07,25;UBERON:0002619,5.34e-07,22 | |||
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| |||
|short_description=p1@PPP1R16A | |||
}} |
Revision as of 00:29, 23 January 2014
Short description: | p1@PPP1R16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R16A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529283_5end |
EntrezGene: | PPP1R16A |
HGNC: | 14941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.68e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.05e-13 | 53 |
regional part of brain | 6.05e-13 | 53 |
neural tube | 1.29e-12 | 56 |
neural rod | 1.29e-12 | 56 |
future spinal cord | 1.29e-12 | 56 |
neural keel | 1.29e-12 | 56 |
nervous system | 1.30e-11 | 89 |
neurectoderm | 1.37e-11 | 86 |
organ system subdivision | 2.93e-11 | 223 |
central nervous system | 8.29e-11 | 81 |
neural plate | 1.37e-10 | 82 |
presumptive neural plate | 1.37e-10 | 82 |
brain | 1.65e-10 | 68 |
future brain | 1.65e-10 | 68 |
regional part of forebrain | 1.73e-09 | 41 |
forebrain | 1.73e-09 | 41 |
anterior neural tube | 1.73e-09 | 41 |
future forebrain | 1.73e-09 | 41 |
cerebral hemisphere | 3.70e-08 | 32 |
brain grey matter | 4.70e-08 | 34 |
gray matter | 4.70e-08 | 34 |
telencephalon | 5.08e-08 | 34 |
ecto-epithelium | 6.63e-08 | 104 |
pre-chordal neural plate | 7.89e-08 | 61 |
tube | 1.19e-07 | 192 |
regional part of telencephalon | 1.47e-07 | 32 |
ectoderm-derived structure | 2.11e-07 | 171 |
ectoderm | 2.11e-07 | 171 |
presumptive ectoderm | 2.11e-07 | 171 |
respiratory primordium | 2.63e-07 | 38 |
endoderm of foregut | 2.63e-07 | 38 |
cerebral cortex | 3.91e-07 | 25 |
pallium | 3.91e-07 | 25 |
regional part of cerebral cortex | 5.34e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.95e-14 | 106 |
disease of cellular proliferation | 1.27e-13 | 239 |
cell type cancer | 1.67e-13 | 143 |
cancer | 2.98e-13 | 235 |