FFCP PHASE1:Hg19::chrX:55478725..55478733,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24092 | |||
|TSSclassifier=weak | |||
|UniProt=Q9H213 | |||
|association_with_transcript=187bp_to_ENST00000342972,NM_014061,uc004dum.2_5end | |||
|description=CAGE_peak_5_at_MAGEH1_5end | |||
|id=chrX:55478725..55478733,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.66e-13!18;CL:0000789!8.66e-13!18;CL:0002420!8.66e-13!18;CL:0002419!8.66e-13!18;CL:0000790!8.66e-13!18;CL:0000624!5.96e-09!6;CL:0000084!6.99e-08!25;CL:0000827!6.99e-08!25;CL:0000625!4.24e-07!11;CL:0000148!9.14e-07!10;CL:0000541!9.14e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.32e-28;6!CL:0000898;2.68e-15;3!CL:0000791;5.71e-12;18!CL:0000789;5.71e-12;18!CL:0002419;5.71e-12;18!CL:0000815;7.37e-11;2!CL:0000792;7.37e-11;2!CL:0002677;7.37e-11;2!CL:0000084;2.40e-08;25!CL:0000623;7.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.31e-28,6;CL:0000898,2.97e-15,3;CL:0000791,6.04e-12,18;CL:0000789,6.04e-12,18;CL:0002420,6.04e-12,18;CL:0002419,6.04e-12,18;CL:0000790,6.04e-12,18;CL:0000815,9.87e-11,2;CL:0000792,9.87e-11,2;CL:0002677,9.87e-11,2;CL:0000838,1.61e-08,52;CL:0000084,2.49e-08,25;CL:0000827,2.49e-08,25;CL:0000542,2.55e-08,53;CL:0000051,2.55e-08,53;CL:0000623,8.05e-07,3;CL:0000825,8.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.71e-12;18!UBERON:0006241;1.90e-07;3!UBERON:0003057;1.90e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-25!57;UBERON:0005068!2.11e-25!57;UBERON:0006241!2.11e-25!57;UBERON:0007135!2.11e-25!57;UBERON:0007023!2.73e-23!115;UBERON:0001017!5.63e-23!82;UBERON:0005743!3.73e-22!86;UBERON:0000955!4.47e-21!69;UBERON:0006238!4.47e-21!69;UBERON:0002616!8.65e-21!59;UBERON:0000073!1.48e-20!94;UBERON:0001016!1.48e-20!94;UBERON:0002780!2.93e-19!41;UBERON:0001890!2.93e-19!41;UBERON:0006240!2.93e-19!41;UBERON:0003075!2.99e-19!86;UBERON:0007284!2.99e-19!86;UBERON:0003080!1.47e-18!42;UBERON:0001893!6.93e-18!34;UBERON:0002346!1.08e-17!90;UBERON:0002020!1.28e-17!34;UBERON:0003528!1.28e-17!34;UBERON:0002791!4.47e-17!33;UBERON:0001869!5.74e-16!32;UBERON:0003056!3.73e-13!61;UBERON:0000153!6.49e-12!129;UBERON:0007811!6.49e-12!129;UBERON:0002619!2.87e-11!22;UBERON:0000033!5.57e-11!123;UBERON:0000956!1.95e-10!25;UBERON:0000203!1.95e-10!25;UBERON:0004121!1.19e-09!169;UBERON:0002308!1.71e-09!9;UBERON:0000125!1.71e-09!9;UBERON:0001950!1.80e-09!20;UBERON:0000924!4.69e-09!173;UBERON:0006601!4.69e-09!173;UBERON:0003076!4.98e-08!15;UBERON:0003057!4.98e-08!15;UBERON:0009663!6.21e-08!7;UBERON:0000200!1.61e-07!6;UBERON:0002420!1.92e-07!9;UBERON:0007245!1.92e-07!9;UBERON:0010009!1.92e-07!9;UBERON:0010011!1.92e-07!9;UBERON:0000454!1.92e-07!9;UBERON:0002298!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.74e-10;2!UBERON:0000122;1.74e-10;2!UBERON:0002771;3.05e-10;2!UBERON:0002240;1.90e-07;3!UBERON:0005174;1.90e-07;3!UBERON:0001137;1.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.31e-10,2;UBERON:0000122,2.31e-10,2;UBERON:0002771,5.33e-10,2;UBERON:0001049,3.45e-09,56;UBERON:0005068,3.45e-09,56;UBERON:0006241,3.45e-09,56;UBERON:0007135,3.45e-09,56;UBERON:0001016,5.57e-08,89;UBERON:0001017,8.15e-08,81;UBERON:0002240,1.57e-07,3;UBERON:0005174,1.57e-07,3;UBERON:0001137,1.57e-07,3;UBERON:0002780,3.34e-07,41;UBERON:0001890,3.34e-07,41;UBERON:0003080,3.34e-07,41;UBERON:0006240,3.34e-07,41;UBERON:0007023,8.37e-07,114 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,1.52909291250092,0,0,0,2.360517241366,1.96505381374582,2.2616164889946,0,5.21475626613745,3.78758244587787,3.89653456815823,0,2.06224135232386,2.21533894583621,1.35401931882508,0.512365278902701,0.130059347559878,0.328875809207352,0,0,2.52087157375503,1.07016331235885,0,0.113309342697566,2.68254345521345,1.71813722741315,1.26509846009751,0.95569624297229,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.00803371612366,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.263504357079378,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0.381988425558278,3.51652341630141,0,0.514137463516618,0.901029173531752,2.28661146104463,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,1.2937654491571,1.28343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.640365346820666,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,3.05163472634166,0.442317039724898,0,1.09692698576986,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,1.14581926067151,0,2.34264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,1.80126086612937,0.821432273351958,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0,0.137539436597234,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.26446520348538,0,0,0,0.314408610199332,0,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0.886068179966986,1.09823638411767,0.3755727921195,0.573409195690071,0.554645257684261,0.869349641179368,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.638535436228605,1.8460472781668,0.504143392443436,0.207471757392654,0.968853873791107,5.71077681036618,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0.472763092328763,0,0,0.507326481551255,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.747667062745149,0.920818829879887,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,1.60342272946051,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,2.74831853960923,0.297046400327086,3.8039015482506,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.883889372481891,1.74540276136151,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,1.89446745545599,5.89521086343593,2.48750831837634,0.413731983447581,0,0,0.645889098360061,0.434523000071005,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p5@MAGEH1 | |||
}} |
Revision as of 05:50, 23 January 2014
Short description: | p5@MAGEH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAGEH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_ENST00000342972, NM_014061, uc004dum.2_5end |
EntrezGene: | MAGEH1 |
HGNC: | 24092 |
UniProt: | Q9H213 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.31e-28 | 6 |
naive T cell | 2.97e-15 | 3 |
mature alpha-beta T cell | 6.04e-12 | 18 |
alpha-beta T cell | 6.04e-12 | 18 |
immature T cell | 6.04e-12 | 18 |
mature T cell | 6.04e-12 | 18 |
immature alpha-beta T cell | 6.04e-12 | 18 |
regulatory T cell | 9.87e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.87e-11 | 2 |
naive regulatory T cell | 9.87e-11 | 2 |
lymphoid lineage restricted progenitor cell | 1.61e-08 | 52 |
T cell | 2.49e-08 | 25 |
pro-T cell | 2.49e-08 | 25 |
lymphocyte | 2.55e-08 | 53 |
common lymphoid progenitor | 2.55e-08 | 53 |
natural killer cell | 8.05e-07 | 3 |
pro-NK cell | 8.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 2.31e-10 | 2 |
neuron projection bundle | 2.31e-10 | 2 |
middle temporal gyrus | 5.33e-10 | 2 |
neural tube | 3.45e-09 | 56 |
neural rod | 3.45e-09 | 56 |
future spinal cord | 3.45e-09 | 56 |
neural keel | 3.45e-09 | 56 |
nervous system | 5.57e-08 | 89 |
central nervous system | 8.15e-08 | 81 |
spinal cord | 1.57e-07 | 3 |
dorsal region element | 1.57e-07 | 3 |
dorsum | 1.57e-07 | 3 |
regional part of forebrain | 3.34e-07 | 41 |
forebrain | 3.34e-07 | 41 |
anterior neural tube | 3.34e-07 | 41 |
future forebrain | 3.34e-07 | 41 |
adult organism | 8.37e-07 | 114 |