FFCP PHASE1:Mm9::chr5:136384758..136384876,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=537|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:136384758..136384876,-|id=chr5:136384758..136384876,-|ontology_enrichment_celltype=CL:0000117!3.69e-13!23;CL:0000337!3.69e-13!23;CL:0000393!3.83e-12!39;CL:0000211!3.83e-12!39;CL:0000540!8.15e-12!33;CL:0000047!8.15e-12!33;CL:0000031!8.15e-12!33;CL:0000404!8.15e-12!33;CL:0000221!1.31e-11!44;CL:0000133!1.31e-11!44;CL:0002319!2.19e-11!43;CL:0000055!4.37e-11!50;CL:0002321!1.58e-08!70;CL:0000220!1.58e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-17,23;CL:0000337,8.00e-17,23;CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0000221,6.29e-12,44;CL:0000133,6.29e-12,44;CL:0000393,7.25e-12,39;CL:0000211,7.25e-12,39;CL:0002319,1.21e-11,43;CL:0002321,1.67e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.61e-22!75;UBERON:0001016!7.61e-22!75;UBERON:0001017!8.84e-22!73;UBERON:0005743!8.84e-22!73;UBERON:0001049!1.56e-17!52;UBERON:0005068!1.56e-17!52;UBERON:0006241!1.56e-17!52;UBERON:0007135!1.56e-17!52;UBERON:0002616!4.81e-16!49;UBERON:0002020!5.11e-16!34;UBERON:0004121!7.88e-16!102;UBERON:0000924!7.88e-16!102;UBERON:0006601!7.88e-16!102;UBERON:0000955!8.62e-16!50;UBERON:0006238!8.62e-16!50;UBERON:0002346!2.74e-14!71;UBERON:0003075!2.74e-14!71;UBERON:0007284!2.74e-14!71;UBERON:0003080!4.30e-13!40;UBERON:0002791!6.94e-13!29;UBERON:0003528!6.94e-13!29;UBERON:0001893!6.94e-13!29;UBERON:0002780!9.55e-13!39;UBERON:0001890!9.55e-13!39;UBERON:0006240!9.55e-13!39;UBERON:0000033!1.01e-11!63;UBERON:0003056!8.19e-10!49;UBERON:0000956!1.35e-08!21;UBERON:0001869!1.35e-08!21;UBERON:0000203!1.35e-08!21;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10;UBERON:0002619!5.35e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.33e-24,73;UBERON:0001016,1.09e-23,75;UBERON:0000073,1.37e-23,54;UBERON:0001049,1.97e-21,52;UBERON:0005068,1.97e-21,52;UBERON:0006241,1.97e-21,52;UBERON:0007135,1.97e-21,52;UBERON:0002020,4.15e-21,34;UBERON:0002616,5.30e-17,46;UBERON:0003528,5.89e-17,29;UBERON:0002791,5.89e-17,29;UBERON:0001893,5.89e-17,29;UBERON:0003080,6.37e-17,40;UBERON:0002780,1.82e-16,39;UBERON:0001890,1.82e-16,39;UBERON:0006240,1.82e-16,39;UBERON:0002346,2.55e-16,64;UBERON:0003075,2.55e-16,64;UBERON:0007284,2.55e-16,64;UBERON:0000955,2.62e-16,47;UBERON:0006238,2.62e-16,47;UBERON:0004121,5.47e-16,95;UBERON:0000924,5.47e-16,95;UBERON:0006601,5.47e-16,95;UBERON:0010314,8.54e-14,92;UBERON:0010371,1.36e-13,73;UBERON:0003056,6.80e-13,49;UBERON:0000956,2.81e-11,21;UBERON:0001869,2.81e-11,21;UBERON:0000203,2.81e-11,21;UBERON:0002021,7.74e-10,10;UBERON:0000411,7.74e-10,10;UBERON:0001950,7.74e-10,10;UBERON:0002619,3.61e-09,17;UBERON:0000025,1.16e-07,114;UBERON:0002420,4.88e-07,8;UBERON:0007245,4.88e-07,8;UBERON:0010009,4.88e-07,8;UBERON:0010011,4.88e-07,8;UBERON:0000454,4.88e-07,8;UBERON:0004111,7.02e-07,122|phase1_expression=1.92178616525753,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,0,1.12630977721333,0,0.34243593645101,0.398860794976682,0,0,0.666219523631325,0.404950534779652,0,0.315462165358238,0.137114433605739,0.84877930359606,0.425216450755349,0.397163804803541,0,0,0.68822784320151,0,1.7230479846363,0.215471232685889,0,0,0.221730510655305,0,1.23012957516914,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.76469446409304,2.04913645487534,0,0.629484089877886,0.811015449756117,0.734187008646726,1.56478268869608,0.872100625521786,0.219686182734472,0.194429899074283,1.25987779462826,1.43752564364972,0.335565212115473,0,0,1.28629718017973,2.86533439938757,3.6097046459421,3.43937983461316,5.81890077199236,8.23980824558033,0.677689064138264,1.77858959222228,5.84934816232909,1.97773272513395,4.9733608046227,2.99600110518405,1.92109152660777,2.48855069540346,2.8351247049655,3.78584930432488,33.9924671440526,25.8416192913388,1.46988959057945,2.1086003624012,5.51531271966013,31.9336054898227,15.9609172606485,18.8936035905179,3.95658863190582,4.02545631850602,5.2091337055676,15.0758819460746,10.1297269805702,15.1270265299042,21.5078867395777,8.68467252874528,3.72798891650601,1.13589289999776,0.906858721281426,0,0,0,2.15881276655127,5.19821133958135,3.58421509677868,0.140444420131752,1.1930122580464,0.259786004602869,0.35333957451034,1.69012103732017,2.56652954828636,0,14.2213340630666,4.76280290224671,5.82727690592727,5.56076889516262,1.48439043634778,0.776813650941515,0.593768556259299,0.867426633830679,1.52232739156071,1.15307748628029,1.65794904607885,1.05829836422134,0.753999547978053,0.247194967734374,0.289198713839823,0,0.808834249737046,0.883366073841574,1.93950101254089,0,0.878342391034642,1.67557365450764,0,0.239630249011841,0,0.508280908292259,2.24685959107234,5.94750783664214,4.39790232395025,4.34560800480691,5.11430914660661,3.53239675751252,3.0825839982874,0.611036183101898,0.124406970610093,0.252722758433675,0,0.650602214813519,0.2299021044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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=537 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:136384758..136384876,- | |||
|description=CAGE_peak_at_chr5:136384758..136384876,- | |||
|id=chr5:136384758..136384876,- | |||
|ontology_enrichment_celltype=CL:0000117!3.69e-13!23;CL:0000337!3.69e-13!23;CL:0000393!3.83e-12!39;CL:0000211!3.83e-12!39;CL:0000540!8.15e-12!33;CL:0000047!8.15e-12!33;CL:0000031!8.15e-12!33;CL:0000404!8.15e-12!33;CL:0000221!1.31e-11!44;CL:0000133!1.31e-11!44;CL:0002319!2.19e-11!43;CL:0000055!4.37e-11!50;CL:0002321!1.58e-08!70;CL:0000220!1.58e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-17,23;CL:0000337,8.00e-17,23;CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0000221,6.29e-12,44;CL:0000133,6.29e-12,44;CL:0000393,7.25e-12,39;CL:0000211,7.25e-12,39;CL:0002319,1.21e-11,43;CL:0002321,1.67e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.61e-22!75;UBERON:0001016!7.61e-22!75;UBERON:0001017!8.84e-22!73;UBERON:0005743!8.84e-22!73;UBERON:0001049!1.56e-17!52;UBERON:0005068!1.56e-17!52;UBERON:0006241!1.56e-17!52;UBERON:0007135!1.56e-17!52;UBERON:0002616!4.81e-16!49;UBERON:0002020!5.11e-16!34;UBERON:0004121!7.88e-16!102;UBERON:0000924!7.88e-16!102;UBERON:0006601!7.88e-16!102;UBERON:0000955!8.62e-16!50;UBERON:0006238!8.62e-16!50;UBERON:0002346!2.74e-14!71;UBERON:0003075!2.74e-14!71;UBERON:0007284!2.74e-14!71;UBERON:0003080!4.30e-13!40;UBERON:0002791!6.94e-13!29;UBERON:0003528!6.94e-13!29;UBERON:0001893!6.94e-13!29;UBERON:0002780!9.55e-13!39;UBERON:0001890!9.55e-13!39;UBERON:0006240!9.55e-13!39;UBERON:0000033!1.01e-11!63;UBERON:0003056!8.19e-10!49;UBERON:0000956!1.35e-08!21;UBERON:0001869!1.35e-08!21;UBERON:0000203!1.35e-08!21;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10;UBERON:0002619!5.35e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.33e-24,73;UBERON:0001016,1.09e-23,75;UBERON:0000073,1.37e-23,54;UBERON:0001049,1.97e-21,52;UBERON:0005068,1.97e-21,52;UBERON:0006241,1.97e-21,52;UBERON:0007135,1.97e-21,52;UBERON:0002020,4.15e-21,34;UBERON:0002616,5.30e-17,46;UBERON:0003528,5.89e-17,29;UBERON:0002791,5.89e-17,29;UBERON:0001893,5.89e-17,29;UBERON:0003080,6.37e-17,40;UBERON:0002780,1.82e-16,39;UBERON:0001890,1.82e-16,39;UBERON:0006240,1.82e-16,39;UBERON:0002346,2.55e-16,64;UBERON:0003075,2.55e-16,64;UBERON:0007284,2.55e-16,64;UBERON:0000955,2.62e-16,47;UBERON:0006238,2.62e-16,47;UBERON:0004121,5.47e-16,95;UBERON:0000924,5.47e-16,95;UBERON:0006601,5.47e-16,95;UBERON:0010314,8.54e-14,92;UBERON:0010371,1.36e-13,73;UBERON:0003056,6.80e-13,49;UBERON:0000956,2.81e-11,21;UBERON:0001869,2.81e-11,21;UBERON:0000203,2.81e-11,21;UBERON:0002021,7.74e-10,10;UBERON:0000411,7.74e-10,10;UBERON:0001950,7.74e-10,10;UBERON:0002619,3.61e-09,17;UBERON:0000025,1.16e-07,114;UBERON:0002420,4.88e-07,8;UBERON:0007245,4.88e-07,8;UBERON:0010009,4.88e-07,8;UBERON:0010011,4.88e-07,8;UBERON:0000454,4.88e-07,8;UBERON:0004111,7.02e-07,122 | |||
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| |||
|short_description=p@chr5:136384758..136384876,- | |||
}} |
Latest revision as of 19:42, 3 August 2015
Short description: | p@chr5:136384758..136384876, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136384758..136384876, - |
Coexpression cluster: | MCL_coexpression_mm9:537 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.00e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.00e-17 | 23 |
neuron | 1.26e-12 | 33 |
neuronal stem cell | 1.26e-12 | 33 |
neuroblast | 1.26e-12 | 33 |
electrically signaling cell | 1.26e-12 | 33 |
ectodermal cell | 6.29e-12 | 44 |
neurectodermal cell | 6.29e-12 | 44 |
electrically responsive cell | 7.25e-12 | 39 |
electrically active cell | 7.25e-12 | 39 |
neural cell | 1.21e-11 | 43 |
embryonic cell | 1.67e-10 | 70 |