FFCP PHASE1:Mm9::chr2:132403980..132403991,-: Difference between revisions
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{{FFCP|EntrezGene=74182|HGNC=|MCL_coexpression_id=1982|UniProt=Q8C0L9,D6RHB5,A2AMD4,D6RHS8|association_with_transcript=0bp_to_ENSMUST00000110142,ENSMUST00000131617,ENSMUST00000145694,NM_001042671,NM_001042672,NM_028802,uc008mmv.1,uc008mmw.1,uc008mmx.1,uc008mmy.1,uc008mmz.1,uc008mna.1,uc008mnb.1,uc008mnc.1_5end|description=CAGE_peak_3_at_Gpcpd1_5end|id=chr2:132403980..132403991,-|ontology_enrichment_celltype=CL:0000117!1.05e-07!23;CL:0000337!1.05e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23;CL:0000540,2.96e-07,33;CL:0000047,2.96e-07,33;CL:0000031,2.96e-07,33;CL:0000404,2.96e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.90e-17!63;UBERON:0001049!6.08e-16!52;UBERON:0005068!6.08e-16!52;UBERON:0006241!6.08e-16!52;UBERON:0007135!6.08e-16!52;UBERON:0000955!1.07e-15!50;UBERON:0006238!1.07e-15!50;UBERON:0002616!2.36e-15!49;UBERON:0003056!4.91e-14!49;UBERON:0002020!7.50e-14!34;UBERON:0002346!2.73e-13!71;UBERON:0003075!2.73e-13!71;UBERON:0007284!2.73e-13!71;UBERON:0003080!3.24e-13!40;UBERON:0002780!1.23e-12!39;UBERON:0001890!1.23e-12!39;UBERON:0006240!1.23e-12!39;UBERON:0002791!2.98e-12!29;UBERON:0003528!2.98e-12!29;UBERON:0001893!2.98e-12!29;UBERON:0007811!3.19e-11!86;UBERON:0001017!3.85e-11!73;UBERON:0005743!3.85e-11!73;UBERON:0000073!9.08e-11!75;UBERON:0001016!9.08e-11!75;UBERON:0000153!2.98e-10!94;UBERON:0000956!4.00e-09!21;UBERON:0001869!4.00e-09!21;UBERON:0000203!4.00e-09!21;UBERON:0004121!4.13e-09!102;UBERON:0000924!4.13e-09!102;UBERON:0006601!4.13e-09!102;UBERON:0002619!3.33e-08!17;UBERON:0002021!1.87e-07!10;UBERON:0000411!1.87e-07!10;UBERON:0001950!1.87e-07!10;UBERON:0000025!5.98e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-36,54;UBERON:0001049,3.54e-33,52;UBERON:0005068,3.54e-33,52;UBERON:0006241,3.54e-33,52;UBERON:0007135,3.54e-33,52;UBERON:0002616,2.35e-30,46;UBERON:0000955,1.75e-29,47;UBERON:0006238,1.75e-29,47;UBERON:0001017,5.07e-28,73;UBERON:0002346,9.59e-28,64;UBERON:0003075,9.59e-28,64;UBERON:0007284,9.59e-28,64;UBERON:0003080,3.61e-27,40;UBERON:0001016,6.18e-27,75;UBERON:0002780,7.05e-26,39;UBERON:0001890,7.05e-26,39;UBERON:0006240,7.05e-26,39;UBERON:0002020,3.75e-24,34;UBERON:0003528,3.35e-23,29;UBERON:0002791,3.35e-23,29;UBERON:0001893,3.35e-23,29;UBERON:0010371,7.40e-23,73;UBERON:0003056,7.41e-22,49;UBERON:0004121,1.20e-19,95;UBERON:0000924,1.20e-19,95;UBERON:0006601,1.20e-19,95;UBERON:0000956,2.34e-17,21;UBERON:0001869,2.34e-17,21;UBERON:0000203,2.34e-17,21;UBERON:0002619,3.05e-17,17;UBERON:0010314,9.46e-17,92;UBERON:0002021,1.17e-14,10;UBERON:0000411,1.17e-14,10;UBERON:0001950,1.17e-14,10;UBERON:0000025,1.32e-10,114;UBERON:0004111,3.33e-09,122;UBERON:0002420,5.72e-07,8;UBERON:0007245,5.72e-07,8;UBERON:0010009,5.72e-07,8;UBERON:0010011,5.72e-07,8;UBERON:0000454,5.72e-07,8|phase1_expression=0.80074423552397,0,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0,0.258246646883153,0.985521055061667,0.468129052643987,0.68487187290202,0.319088635981346,0.513602189793617,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,2.21112554392781,0,0,0.159992422793407,0,1.72269589234506,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,0.503587271902309,0.202753862439029,0.550640256485045,0,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.286533439938757,0,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0,0,1.76272340924412,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,1.10241719293459,1.34183659425531,1.83843757322004,3.30347642998166,4.72443150915195,3.68655679814984,1.05509030184155,1.00636407962651,1.04182674111352,1.95428099300967,0.56276261003168,1.06958773443767,0.589257170947335,1.85083185038834,1.1183966749518,0.302904773332736,0.302286240427142,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0.448026887097336,1.12355536105401,0.170430322578058,0,0.35333957451034,0.704217098883403,0,0,7.11066703153331,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0.494389935468748,0.433798070759735,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,0,2.34224637609238,1.46612694769419,0.510914110417183,0.11981512450592,0.599902730993408,0,3.44518470631092,4.11750542536764,3.01570445070875,4.51943232499919,3.3243009452943,2.28566849015516,4.2182728397617,0.509196819251581,0.124406970610093,0,0.631325567659422,0.260240885925407,0.459804208866946,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,1.03481348295606,0.431135985865684,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.90031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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74182 | |||
|HGNC= | |||
|MCL_coexpression_id=1982 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C0L9,uniprot:D6RHB5,uniprot:A2AMD4,uniprot:D6RHS8 | |||
|association_with_transcript=0bp_to_ENSMUST00000110142,ENSMUST00000131617,ENSMUST00000145694,NM_001042671,NM_001042672,NM_028802,uc008mmv.1,uc008mmw.1,uc008mmx.1,uc008mmy.1,uc008mmz.1,uc008mna.1,uc008mnb.1,uc008mnc.1_5end | |||
|cluster_id=chr2:132403980..132403991,- | |||
|description=CAGE_peak_3_at_Gpcpd1_5end | |||
|id=chr2:132403980..132403991,- | |||
|ontology_enrichment_celltype=CL:0000117!1.05e-07!23;CL:0000337!1.05e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23;CL:0000540,2.96e-07,33;CL:0000047,2.96e-07,33;CL:0000031,2.96e-07,33;CL:0000404,2.96e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.90e-17!63;UBERON:0001049!6.08e-16!52;UBERON:0005068!6.08e-16!52;UBERON:0006241!6.08e-16!52;UBERON:0007135!6.08e-16!52;UBERON:0000955!1.07e-15!50;UBERON:0006238!1.07e-15!50;UBERON:0002616!2.36e-15!49;UBERON:0003056!4.91e-14!49;UBERON:0002020!7.50e-14!34;UBERON:0002346!2.73e-13!71;UBERON:0003075!2.73e-13!71;UBERON:0007284!2.73e-13!71;UBERON:0003080!3.24e-13!40;UBERON:0002780!1.23e-12!39;UBERON:0001890!1.23e-12!39;UBERON:0006240!1.23e-12!39;UBERON:0002791!2.98e-12!29;UBERON:0003528!2.98e-12!29;UBERON:0001893!2.98e-12!29;UBERON:0007811!3.19e-11!86;UBERON:0001017!3.85e-11!73;UBERON:0005743!3.85e-11!73;UBERON:0000073!9.08e-11!75;UBERON:0001016!9.08e-11!75;UBERON:0000153!2.98e-10!94;UBERON:0000956!4.00e-09!21;UBERON:0001869!4.00e-09!21;UBERON:0000203!4.00e-09!21;UBERON:0004121!4.13e-09!102;UBERON:0000924!4.13e-09!102;UBERON:0006601!4.13e-09!102;UBERON:0002619!3.33e-08!17;UBERON:0002021!1.87e-07!10;UBERON:0000411!1.87e-07!10;UBERON:0001950!1.87e-07!10;UBERON:0000025!5.98e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-36,54;UBERON:0001049,3.54e-33,52;UBERON:0005068,3.54e-33,52;UBERON:0006241,3.54e-33,52;UBERON:0007135,3.54e-33,52;UBERON:0002616,2.35e-30,46;UBERON:0000955,1.75e-29,47;UBERON:0006238,1.75e-29,47;UBERON:0001017,5.07e-28,73;UBERON:0002346,9.59e-28,64;UBERON:0003075,9.59e-28,64;UBERON:0007284,9.59e-28,64;UBERON:0003080,3.61e-27,40;UBERON:0001016,6.18e-27,75;UBERON:0002780,7.05e-26,39;UBERON:0001890,7.05e-26,39;UBERON:0006240,7.05e-26,39;UBERON:0002020,3.75e-24,34;UBERON:0003528,3.35e-23,29;UBERON:0002791,3.35e-23,29;UBERON:0001893,3.35e-23,29;UBERON:0010371,7.40e-23,73;UBERON:0003056,7.41e-22,49;UBERON:0004121,1.20e-19,95;UBERON:0000924,1.20e-19,95;UBERON:0006601,1.20e-19,95;UBERON:0000956,2.34e-17,21;UBERON:0001869,2.34e-17,21;UBERON:0000203,2.34e-17,21;UBERON:0002619,3.05e-17,17;UBERON:0010314,9.46e-17,92;UBERON:0002021,1.17e-14,10;UBERON:0000411,1.17e-14,10;UBERON:0001950,1.17e-14,10;UBERON:0000025,1.32e-10,114;UBERON:0004111,3.33e-09,122;UBERON:0002420,5.72e-07,8;UBERON:0007245,5.72e-07,8;UBERON:0010009,5.72e-07,8;UBERON:0010011,5.72e-07,8;UBERON:0000454,5.72e-07,8 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0,0.258246646883153,0.985521055061667,0.468129052643987,0.68487187290202,0.319088635981346,0.513602189793617,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,2.21112554392781,0,0,0.159992422793407,0,1.72269589234506,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,0.503587271902309,0.202753862439029,0.550640256485045,0,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.286533439938757,0,1.21389876515759,0,0.633831403506179,0,0,0,0,0,0,0,1.76272340924412,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,1.10241719293459,1.34183659425531,1.83843757322004,3.30347642998166,4.72443150915195,3.68655679814984,1.05509030184155,1.00636407962651,1.04182674111352,1.95428099300967,0.56276261003168,1.06958773443767,0.589257170947335,1.85083185038834,1.1183966749518,0.302904773332736,0.302286240427142,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0.448026887097336,1.12355536105401,0.170430322578058,0,0.35333957451034,0.704217098883403,0,0,7.11066703153331,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0.494389935468748,0.433798070759735,0.884610551949874,1.13236794963186,0.441683036920787,0.484875253135222,0,2.34224637609238,1.46612694769419,0.510914110417183,0.11981512450592,0.599902730993408,0,3.44518470631092,4.11750542536764,3.01570445070875,4.51943232499919,3.3243009452943,2.28566849015516,4.2182728397617,0.509196819251581,0.124406970610093,0,0.631325567659422,0.260240885925407,0.459804208866946,0.900310649026746,0.452114453507145,0.680364991513279,0.768682321709099,0.937017245597288,1.03481348295606,0.431135985865684,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.473489471170421,0.590292695242212,0.308534225774757,0,0.268273401399619,0.817357396570186,0.329119699826961,1.14917224855367,0.972825714550269,0.730999937126662,0.878200461164203,0.671032093801859,5.04695876553905,1.9551876352064,0.991256348951394,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0,0.350679099451593,0.316182685621286,0,0.156998727841375,0.370191491765402,0.296452627087149,0,0.196558995113203,0.899448449539415,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.502518772325447,0.714130922658041,0.975668239288994,0,0,0.956728611944923,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,3.85321415970701,3.98519734413491,0.327869890753351,0.757412781613119,0.315508219416257,1.17131623288992,0,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0.534196811001766,0,0,0,0,0.302323556964751,0.565815239267694,0,0.614870295887855,1.03371317267288,1.81766864738753,0.712994756769443,0,0,0,1.36175842301515,0,0.129358683782755,1.07168517515796,0.886701168211368,1.60531935841864,1.15184314421485,0,0,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0.422190474497091,0,0.656563598980245,0.291480836629851,6.48988557036784,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.27338845544205,0.915112692826091,0,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.436725127492355,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,7.32800820289447,0.598066184175915,0.827292452285488,1.16670713006429,0.387479470433193,0.168956125490778,1.05621514781179,0.911430693907651,0.943734099831398,6.03960302065015,8.06484017522023,0.948033361884535,0,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.381034033274999,0.302478555410522,0,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.358855426437903,0.335769232728157,0,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,6.21227026878773,6.44455331110048,4.01026859407578,6.35856774671644,3.42541259885321,2.2661816921691,3.37511250115903,1.35096360967266,4.98456649882625,3.10656187051092,0.207574695168353,1.59609949360412,0.512200817262403,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0.962757628775446,0.505394423527595,1.01391719956096,0.377252682772152,0.56184904481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| |||
|short_description=p3@Gpcpd1 | |||
}} |
Revision as of 02:42, 4 August 2015
Short description: | p3@Gpcpd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpcpd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1982 |
Association with transcript: | 0bp_to_ENSMUST00000110142, ENSMUST00000131617, ENSMUST00000145694, NM_001042671, NM_001042672, NM_028802, uc008mmv.1, uc008mmw.1, uc008mmx.1, uc008mmy.1, uc008mmz.1, uc008mna.1, uc008mnb.1, uc008mnc.1_5end |
EntrezGene: | 74182 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-10 | 23 |
neuron | 2.96e-07 | 33 |
neuronal stem cell | 2.96e-07 | 33 |
neuroblast | 2.96e-07 | 33 |
electrically signaling cell | 2.96e-07 | 33 |