FFCP PHASE1:Mm9::chr5:5514906..5514918,-: Difference between revisions
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{{FFCP|EntrezGene=64945|HGNC=|MCL_coexpression_id=3342|UniProt=Q9ET43|association_with_transcript=-33bp_to_ENSMUST00000060947_5end|description=CAGE_peak_4_at_Cldn12_5end|id=chr5:5514906..5514918,-|ontology_enrichment_celltype=CL:0000055!2.33e-13!50;CL:0002321!2.77e-12!70;CL:0000220!2.77e-12!70;CL:0000221!4.70e-11!44;CL:0000133!4.70e-11!44;CL:0002319!1.02e-10!43;CL:0000393!1.45e-08!39;CL:0000211!1.45e-08!39|ontology_enrichment_celltype_v019_2=CL:0002321,2.93e-13,70;CL:0000221,3.01e-11,44;CL:0000133,3.01e-11,44;CL:0002319,7.43e-11,43;CL:0000393,5.67e-08,39;CL:0000211,5.67e-08,39;CL:0000333,8.74e-07,10;CL:0000095,8.74e-07,10;CL:0000243,8.74e-07,10;CL:0000123,8.74e-07,10;CL:0000125,8.74e-07,10;CL:0000030,8.74e-07,10;CL:0000339,8.74e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.84e-20!102;UBERON:0000924!1.84e-20!102;UBERON:0006601!1.84e-20!102;UBERON:0000073!4.25e-20!75;UBERON:0001016!4.25e-20!75;UBERON:0000025!3.00e-19!114;UBERON:0001017!3.87e-19!73;UBERON:0005743!3.87e-19!73;UBERON:0004111!3.90e-17!122;UBERON:0000955!4.88e-14!50;UBERON:0006238!4.88e-14!50;UBERON:0002616!2.06e-13!49;UBERON:0000033!4.17e-13!63;UBERON:0001049!5.74e-13!52;UBERON:0005068!5.74e-13!52;UBERON:0006241!5.74e-13!52;UBERON:0007135!5.74e-13!52;UBERON:0002346!1.18e-12!71;UBERON:0003075!1.18e-12!71;UBERON:0007284!1.18e-12!71;UBERON:0000119!3.19e-10!183;UBERON:0000483!7.33e-10!181;UBERON:0003056!1.04e-09!49;UBERON:0003080!1.04e-09!40;UBERON:0002780!2.49e-09!39;UBERON:0001890!2.49e-09!39;UBERON:0006240!2.49e-09!39;UBERON:0003914!4.25e-09!47;UBERON:0002020!6.12e-09!34;UBERON:0002107!2.55e-08!22;UBERON:0007499!2.55e-08!22;UBERON:0006925!2.55e-08!22;UBERON:0009497!2.55e-08!22;UBERON:0000015!2.55e-08!22;UBERON:0002423!2.55e-08!22;UBERON:0006235!2.55e-08!22;UBERON:0008835!2.55e-08!22;UBERON:0003894!2.55e-08!22;UBERON:0004161!2.55e-08!22;UBERON:0008836!2.55e-08!22;UBERON:0002791!3.09e-08!29;UBERON:0003528!3.09e-08!29;UBERON:0001893!3.09e-08!29;UBERON:0002365!1.00e-07!25;UBERON:0002330!1.00e-07!25;UBERON:0009854!2.68e-07!23;UBERON:0009856!2.68e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.52e-24,95;UBERON:0000924,6.52e-24,95;UBERON:0006601,6.52e-24,95;UBERON:0001016,6.92e-22,75;UBERON:0001017,9.48e-21,73;UBERON:0000025,2.13e-18,114;UBERON:0010371,1.36e-16,73;UBERON:0004111,5.41e-16,122;UBERON:0000073,1.61e-15,54;UBERON:0002346,4.59e-15,64;UBERON:0003075,4.59e-15,64;UBERON:0007284,4.59e-15,64;UBERON:0001049,4.86e-14,52;UBERON:0005068,4.86e-14,52;UBERON:0006241,4.86e-14,52;UBERON:0007135,4.86e-14,52;UBERON:0010314,1.12e-13,92;UBERON:0000955,1.34e-13,47;UBERON:0006238,1.34e-13,47;UBERON:0000119,6.74e-13,176;UBERON:0002616,6.97e-13,46;UBERON:0000483,9.19e-13,174;UBERON:0003056,1.37e-10,49;UBERON:0003080,1.79e-10,40;UBERON:0002780,5.02e-10,39;UBERON:0001890,5.02e-10,39;UBERON:0006240,5.02e-10,39;UBERON:0002107,4.19e-09,22;UBERON:0007499,4.19e-09,22;UBERON:0006925,4.19e-09,22;UBERON:0009497,4.19e-09,22;UBERON:0000015,4.19e-09,22;UBERON:0002423,4.19e-09,22;UBERON:0006235,4.19e-09,22;UBERON:0008835,4.19e-09,22;UBERON:0003894,4.19e-09,22;UBERON:0004161,4.19e-09,22;UBERON:0008836,4.19e-09,22;UBERON:0002020,5.67e-09,34;UBERON:0002365,6.92e-09,25;UBERON:0002330,6.92e-09,25;UBERON:0003914,8.89e-09,47;UBERON:0003528,2.00e-08,29;UBERON:0002791,2.00e-08,29;UBERON:0001893,2.00e-08,29;UBERON:0009854,2.31e-08,23;UBERON:0009856,2.31e-08,23|phase1_expression=0.640595388419176,0.348975407639361,2.27499619694768,2.11724947914781,0.500895729946347,0.503637815735669,1.16806320297763,0,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,0,0,0,0,0,0.157731082679119,0,0,2.21112554392781,0.0992909512008853,0.261199789138935,0.799962113967033,0.68822784320151,0.57423196411502,0.430761996159075,0.646413698057667,0.760093677825496,1.26015064879965,0.221730510655305,1.27006134691926,1.23012957516914,0,2.59966457776147,1.16364251750945,0.612508068787107,0.418531630736908,0,1.0470474879476,0,0,0.485510353031154,1.38486499773135,0.912392380975631,2.9367480345869,1.56478268869608,16.133861572153,3.95435128922049,4.86074747685709,4.19959264876088,10.062679505548,0,0,0,6.43148590089868,3.72493471920384,6.18806510732931,1.21389876515759,1.05798195854407,1.26766280701236,2.37191172448392,0.889294796111139,0.449949858640699,0,0,1.49800055259202,2.30530983192933,1.34796496001021,1.21505344498522,0.841299845405528,1.99955689082663,1.76694832761291,0.367472397644862,1.62937300731002,0.919218786610021,5.50579404996943,4.59674417106676,6.29786786350598,1.71452174049252,1.73826522844578,1.56274011167028,3.35019598801657,3.37657566019008,2.90316670775939,2.94628585473668,1.13897344639282,0.745597783301202,5.2251073399897,1.88928900266964,3.18850937571846,3.44169550792555,8.15965600449301,10.7940638327563,7.14754059192436,12.5447528387254,4.49422144421606,0,0.519572009205738,0,2.25349471642689,0,0,0,1.08245520505607,0.760079596425296,0,3.65388415100992,0.258937883647172,1.1875371125186,0.86742663383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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64945 | |||
|HGNC= | |||
|MCL_coexpression_id=3342 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ET43 | |||
|association_with_transcript=-33bp_to_ENSMUST00000060947_5end | |||
|cluster_id=chr5:5514906..5514918,- | |||
|description=CAGE_peak_4_at_Cldn12_5end | |||
|id=chr5:5514906..5514918,- | |||
|ontology_enrichment_celltype=CL:0000055!2.33e-13!50;CL:0002321!2.77e-12!70;CL:0000220!2.77e-12!70;CL:0000221!4.70e-11!44;CL:0000133!4.70e-11!44;CL:0002319!1.02e-10!43;CL:0000393!1.45e-08!39;CL:0000211!1.45e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.93e-13,70;CL:0000221,3.01e-11,44;CL:0000133,3.01e-11,44;CL:0002319,7.43e-11,43;CL:0000393,5.67e-08,39;CL:0000211,5.67e-08,39;CL:0000333,8.74e-07,10;CL:0000095,8.74e-07,10;CL:0000243,8.74e-07,10;CL:0000123,8.74e-07,10;CL:0000125,8.74e-07,10;CL:0000030,8.74e-07,10;CL:0000339,8.74e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.52e-24,95;UBERON:0000924,6.52e-24,95;UBERON:0006601,6.52e-24,95;UBERON:0001016,6.92e-22,75;UBERON:0001017,9.48e-21,73;UBERON:0000025,2.13e-18,114;UBERON:0010371,1.36e-16,73;UBERON:0004111,5.41e-16,122;UBERON:0000073,1.61e-15,54;UBERON:0002346,4.59e-15,64;UBERON:0003075,4.59e-15,64;UBERON:0007284,4.59e-15,64;UBERON:0001049,4.86e-14,52;UBERON:0005068,4.86e-14,52;UBERON:0006241,4.86e-14,52;UBERON:0007135,4.86e-14,52;UBERON:0010314,1.12e-13,92;UBERON:0000955,1.34e-13,47;UBERON:0006238,1.34e-13,47;UBERON:0000119,6.74e-13,176;UBERON:0002616,6.97e-13,46;UBERON:0000483,9.19e-13,174;UBERON:0003056,1.37e-10,49;UBERON:0003080,1.79e-10,40;UBERON:0002780,5.02e-10,39;UBERON:0001890,5.02e-10,39;UBERON:0006240,5.02e-10,39;UBERON:0002107,4.19e-09,22;UBERON:0007499,4.19e-09,22;UBERON:0006925,4.19e-09,22;UBERON:0009497,4.19e-09,22;UBERON:0000015,4.19e-09,22;UBERON:0002423,4.19e-09,22;UBERON:0006235,4.19e-09,22;UBERON:0008835,4.19e-09,22;UBERON:0003894,4.19e-09,22;UBERON:0004161,4.19e-09,22;UBERON:0008836,4.19e-09,22;UBERON:0002020,5.67e-09,34;UBERON:0002365,6.92e-09,25;UBERON:0002330,6.92e-09,25;UBERON:0003914,8.89e-09,47;UBERON:0003528,2.00e-08,29;UBERON:0002791,2.00e-08,29;UBERON:0001893,2.00e-08,29;UBERON:0009854,2.31e-08,23;UBERON:0009856,2.31e-08,23 | |||
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| |||
|short_description=p4@Cldn12 | |||
}} |
Revision as of 11:46, 4 August 2015
Short description: | p4@Cldn12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cldn12_5end |
Coexpression cluster: | MCL_coexpression_mm9:3342 |
Association with transcript: | -33bp_to_ENSMUST00000060947_5end |
EntrezGene: | 64945 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.93e-13 | 70 |
ectodermal cell | 3.01e-11 | 44 |
neurectodermal cell | 3.01e-11 | 44 |
neural cell | 7.43e-11 | 43 |
electrically responsive cell | 5.67e-08 | 39 |
electrically active cell | 5.67e-08 | 39 |
migratory neural crest cell | 8.74e-07 | 10 |
neuron associated cell | 8.74e-07 | 10 |
glial cell (sensu Vertebrata) | 8.74e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.74e-07 | 10 |
glial cell | 8.74e-07 | 10 |
glioblast | 8.74e-07 | 10 |
glioblast (sensu Vertebrata) | 8.74e-07 | 10 |