FFCP PHASE1:Mm9::chr4:107973650..107973712,-: Difference between revisions
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{{FFCP|EntrezGene=414872|HGNC=|MCL_coexpression_id=1|UniProt=Q3UFS0,E9Q209|association_with_transcript=0bp_to_ENSMUST00000043616,ENSMUST00000163293,NM_001033634,uc008uax.2,uc008uay.2_5end|description=CAGE_peak_1_at_Zyg11b_5end|id=chr4:107973650..107973712,-|ontology_enrichment_celltype=CL:0000117!5.91e-12!23;CL:0000337!5.91e-12!23;CL:0000540!1.77e-09!33;CL:0000047!1.77e-09!33;CL:0000031!1.77e-09!33;CL:0000404!1.77e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-12,23;CL:0000337,5.91e-12,23;CL:0000540,1.77e-09,33;CL:0000047,1.77e-09,33;CL:0000031,1.77e-09,33;CL:0000404,1.77e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.46e-15!34;UBERON:0001049!3.05e-14!52;UBERON:0005068!3.05e-14!52;UBERON:0006241!3.05e-14!52;UBERON:0007135!3.05e-14!52;UBERON:0000955!2.88e-13!50;UBERON:0006238!2.88e-13!50;UBERON:0001017!4.35e-13!73;UBERON:0005743!4.35e-13!73;UBERON:0000033!7.13e-13!63;UBERON:0002616!8.04e-13!49;UBERON:0007811!9.33e-13!86;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0000073!6.45e-12!75;UBERON:0001016!6.45e-12!75;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0000153!2.16e-11!94;UBERON:0003080!4.29e-11!40;UBERON:0003056!9.95e-11!49;UBERON:0002780!1.27e-10!39;UBERON:0001890!1.27e-10!39;UBERON:0006240!1.27e-10!39;UBERON:0004121!1.50e-09!102;UBERON:0000924!1.50e-09!102;UBERON:0006601!1.50e-09!102;UBERON:0000956!7.15e-09!21;UBERON:0001869!7.15e-09!21;UBERON:0000203!7.15e-09!21;UBERON:0002021!6.62e-08!10;UBERON:0000411!6.62e-08!10;UBERON:0001950!6.62e-08!10;UBERON:0002619!2.98e-07!17;UBERON:0000025!5.87e-07!114;UBERON:0004111!9.23e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.05e-15,54;UBERON:0002020,2.46e-15,34;UBERON:0001049,3.05e-14,52;UBERON:0005068,3.05e-14,52;UBERON:0006241,3.05e-14,52;UBERON:0007135,3.05e-14,52;UBERON:0002346,1.51e-13,64;UBERON:0003075,1.51e-13,64;UBERON:0007284,1.51e-13,64;UBERON:0001017,4.35e-13,73;UBERON:0003528,1.22e-12,29;UBERON:0002791,1.22e-12,29;UBERON:0001893,1.22e-12,29;UBERON:0001016,6.45e-12,75;UBERON:0000955,1.31e-11,47;UBERON:0006238,1.31e-11,47;UBERON:0010371,2.48e-11,73;UBERON:0002616,3.53e-11,46;UBERON:0003080,4.29e-11,40;UBERON:0004121,9.42e-11,95;UBERON:0000924,9.42e-11,95;UBERON:0006601,9.42e-11,95;UBERON:0003056,9.95e-11,49;UBERON:0002780,1.27e-10,39;UBERON:0001890,1.27e-10,39;UBERON:0006240,1.27e-10,39;UBERON:0000956,7.15e-09,21;UBERON:0001869,7.15e-09,21;UBERON:0000203,7.15e-09,21;UBERON:0010314,1.71e-08,92;UBERON:0002021,6.62e-08,10;UBERON:0000411,6.62e-08,10;UBERON:0001950,6.62e-08,10;UBERON:0000483,2.69e-07,174;UBERON:0002619,2.98e-07,17;UBERON:0000025,5.87e-07,114;UBERON:0004111,9.23e-07,122|phase1_expression=33.4711090449019,38.0383194326904,42.3149292632269,58.678056993525,52.5940516443665,25.5176493306072,18.9226238882376,66.2402649255286,43.08134897841,47.0469697907207,20.7173741552861,22.3362045186942,77.5539306588362,70.3734239472929,14.6568295198892,15.1856450542369,13.9912375625629,41.9564679926456,48.6756239300373,49.6535892603695,37.3340043763196,22.6383368738018,16.194386926614,15.0392877425802,19.4997888907094,35.6023817751313,19.3842898271584,22.6244794320183,28.5035129184561,50.910086211506,20.6209374909433,11.4305521222734,7.99584223859941,0,25.7077941578634,17.9533416987172,25.3170001765338,111.747945406754,52.3494680830946,57.064088093144,87.0582602285901,93.5772314393071,77.1961461319534,17.1219672446785,17.8423398946346,16.152114190228,19.559783608701,9.3750817243592,10.1055644057857,18.8597002102055,14.8385606922884,15.8127820801469,58.8916947262655,79.0644734792365,100.155952144454,24.6969058594509,28.0802771139982,30.4246534443691,83.9613312567331,78.8196559115329,74.7921056137291,12.1984031544888,6.22506357277798,12.1486461832989,9.88866362566974,9.9467216092454,8.98800331555214,9.60545763303886,66.7761103266596,58.7275831742854,60.9942387919008,72.5553500385661,55.8797408607582,73.9844427258322,48.3061173931911,83.6489095815119,94.6996576594743,96.1485655781463,94.3144114193335,84.4072241473241,62.2115976496386,76.0533521012869,82.079801706406,90.0420176050688,79.1494923483876,118.440691360414,109.48382253451,101.960496866439,17.8713816266314,24.0317561139578,50.7262855227936,37.858650587181,36.0384806865108,48.5732872474035,70.8256295017959,77.9566783549364,38.6222155362318,18.7473354835864,11.950156211732,13.7802434059033,28.7320576344428,28.2318250311499,22.9324715735981,35.5533351576666,16.4533191168523,15.7083116594561,17.6933555755174,37.2239447884135,86.7441910218025,35.4776712364931,23.7674897669606,27.0974275697806,23.753396217374,29.9938054699719,40.8032813760896,39.0823099035291,24.7194967734374,52.344967205008,40.6920853896942,27.9856650409018,41.7390469890144,34.4261429726008,39.1422698558057,58.848940199321,67.4418395939325,41.1285858885832,32.1104533675866,8.39863823390771,25.6681858687591,83.1338048696766,72.7425958481616,90.7224422254881,101.86105163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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:414872 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UFS0,uniprot:E9Q209 | |||
|association_with_transcript=0bp_to_ENSMUST00000043616,ENSMUST00000163293,NM_001033634,uc008uax.2,uc008uay.2_5end | |||
|cluster_id=chr4:107973650..107973712,- | |||
|description=CAGE_peak_1_at_Zyg11b_5end | |||
|id=chr4:107973650..107973712,- | |||
|ontology_enrichment_celltype=CL:0000117!5.91e-12!23;CL:0000337!5.91e-12!23;CL:0000540!1.77e-09!33;CL:0000047!1.77e-09!33;CL:0000031!1.77e-09!33;CL:0000404!1.77e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-12,23;CL:0000337,5.91e-12,23;CL:0000540,1.77e-09,33;CL:0000047,1.77e-09,33;CL:0000031,1.77e-09,33;CL:0000404,1.77e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.46e-15!34;UBERON:0001049!3.05e-14!52;UBERON:0005068!3.05e-14!52;UBERON:0006241!3.05e-14!52;UBERON:0007135!3.05e-14!52;UBERON:0000955!2.88e-13!50;UBERON:0006238!2.88e-13!50;UBERON:0001017!4.35e-13!73;UBERON:0005743!4.35e-13!73;UBERON:0000033!7.13e-13!63;UBERON:0002616!8.04e-13!49;UBERON:0007811!9.33e-13!86;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0000073!6.45e-12!75;UBERON:0001016!6.45e-12!75;UBERON:0002346!1.29e-11!71;UBERON:0003075!1.29e-11!71;UBERON:0007284!1.29e-11!71;UBERON:0000153!2.16e-11!94;UBERON:0003080!4.29e-11!40;UBERON:0003056!9.95e-11!49;UBERON:0002780!1.27e-10!39;UBERON:0001890!1.27e-10!39;UBERON:0006240!1.27e-10!39;UBERON:0004121!1.50e-09!102;UBERON:0000924!1.50e-09!102;UBERON:0006601!1.50e-09!102;UBERON:0000956!7.15e-09!21;UBERON:0001869!7.15e-09!21;UBERON:0000203!7.15e-09!21;UBERON:0002021!6.62e-08!10;UBERON:0000411!6.62e-08!10;UBERON:0001950!6.62e-08!10;UBERON:0002619!2.98e-07!17;UBERON:0000025!5.87e-07!114;UBERON:0004111!9.23e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.05e-15,54;UBERON:0002020,2.46e-15,34;UBERON:0001049,3.05e-14,52;UBERON:0005068,3.05e-14,52;UBERON:0006241,3.05e-14,52;UBERON:0007135,3.05e-14,52;UBERON:0002346,1.51e-13,64;UBERON:0003075,1.51e-13,64;UBERON:0007284,1.51e-13,64;UBERON:0001017,4.35e-13,73;UBERON:0003528,1.22e-12,29;UBERON:0002791,1.22e-12,29;UBERON:0001893,1.22e-12,29;UBERON:0001016,6.45e-12,75;UBERON:0000955,1.31e-11,47;UBERON:0006238,1.31e-11,47;UBERON:0010371,2.48e-11,73;UBERON:0002616,3.53e-11,46;UBERON:0003080,4.29e-11,40;UBERON:0004121,9.42e-11,95;UBERON:0000924,9.42e-11,95;UBERON:0006601,9.42e-11,95;UBERON:0003056,9.95e-11,49;UBERON:0002780,1.27e-10,39;UBERON:0001890,1.27e-10,39;UBERON:0006240,1.27e-10,39;UBERON:0000956,7.15e-09,21;UBERON:0001869,7.15e-09,21;UBERON:0000203,7.15e-09,21;UBERON:0010314,1.71e-08,92;UBERON:0002021,6.62e-08,10;UBERON:0000411,6.62e-08,10;UBERON:0001950,6.62e-08,10;UBERON:0000483,2.69e-07,174;UBERON:0002619,2.98e-07,17;UBERON:0000025,5.87e-07,114;UBERON:0004111,9.23e-07,122 | |||
|phase1_expression=33.4711090449019,38.0383194326904,42.3149292632269,58.678056993525,52.5940516443665,25.5176493306072,18.9226238882376,66.2402649255286,43.08134897841,47.0469697907207,20.7173741552861,22.3362045186942,77.5539306588362,70.3734239472929,14.6568295198892,15.1856450542369,13.9912375625629,41.9564679926456,48.6756239300373,49.6535892603695,37.3340043763196,22.6383368738018,16.194386926614,15.0392877425802,19.4997888907094,35.6023817751313,19.3842898271584,22.6244794320183,28.5035129184561,50.910086211506,20.6209374909433,11.4305521222734,7.99584223859941,0,25.7077941578634,17.9533416987172,25.3170001765338,111.747945406754,52.3494680830946,57.064088093144,87.0582602285901,93.5772314393071,77.1961461319534,17.1219672446785,17.8423398946346,16.152114190228,19.559783608701,9.3750817243592,10.1055644057857,18.8597002102055,14.8385606922884,15.8127820801469,58.8916947262655,79.0644734792365,100.155952144454,24.6969058594509,28.0802771139982,30.4246534443691,83.9613312567331,78.8196559115329,74.7921056137291,12.1984031544888,6.22506357277798,12.1486461832989,9.88866362566974,9.9467216092454,8.98800331555214,9.60545763303886,66.7761103266596,58.7275831742854,60.9942387919008,72.5553500385661,55.8797408607582,73.9844427258322,48.3061173931911,83.6489095815119,94.6996576594743,96.1485655781463,94.3144114193335,84.4072241473241,62.2115976496386,76.0533521012869,82.079801706406,90.0420176050688,79.1494923483876,118.440691360414,109.48382253451,101.960496866439,17.8713816266314,24.0317561139578,50.7262855227936,37.858650587181,36.0384806865108,48.5732872474035,70.8256295017959,77.9566783549364,38.6222155362318,18.7473354835864,11.950156211732,13.7802434059033,28.7320576344428,28.2318250311499,22.9324715735981,35.5533351576666,16.4533191168523,15.7083116594561,17.6933555755174,37.2239447884135,86.7441910218025,35.4776712364931,23.7674897669606,27.0974275697806,23.753396217374,29.9938054699719,40.8032813760896,39.0823099035291,24.7194967734374,52.344967205008,40.6920853896942,27.9856650409018,41.7390469890144,34.4261429726008,39.1422698558057,58.848940199321,67.4418395939325,41.1285858885832,32.1104533675866,8.39863823390771,25.6681858687591,83.1338048696766,72.7425958481616,90.7224422254881,101.861051632674,102.030467474802,82.6996417347049,88.2592471088602,31.875720885149,34.833951770826,31.084899287342,53.8731151069373,29.6674609954964,30.8068819940854,34.7519910524324,34.9635177378859,38.1684760238949,45.8647118619762,41.5098639799599,55.8799280796274,27.377135102471,31.0133971475224,38.0054428194129,30.9065982722881,30.3071501655902,27.8601733217733,30.0441919155597,30.4522428232295,11.2354109970118,11.0659600059328,17.0498099637356,22.1624576612987,24.390710238034,20.8871991294777,22.490749880595,24.7922932001729,28.539415884165,26.7414036462969,30.8514411609562,38.0655016116973,29.9498926842534,47.4443971188585,55.7753409675487,64.7665944294222,51.5942770933969,56.2324894605958,87.0600387055487,88.1892528090468,66.7445941627272,31.9985185662889,27.5141843190452,32.9776074041823,30.7993232559803,26.6222252502812,26.6853652613844,24.9195570207452,36.5387377389274,28.3282202125299,30.1602250560323,26.6601672535142,33.1438948102504,30.5598598942435,35.8789162791992,36.8411355520579,19.5357937981674,33.0178201442116,33.8123207019241,31.769607143869,32.1961128698259,34.997774125269,37.8154492003059,44.7258748378195,45.2156336183159,39.3636952910544,43.2820835547237,15.5165948315967,13.7591296579242,15.5154857545549,18.8659912891308,16.6412240229168,23.9348300674535,32.2219673944908,50.424055527036,24.7105271869273,34.5043695665651,38.7026585575244,41.8130481973511,41.4229359833263,41.6201999370836,61.2703272131476,36.5811316529877,30.887100118589,28.1929409244705,31.4028408684098,35.9076079881408,31.9936951713868,33.0880660831559,36.0997248536928,40.9851374676097,40.306573516077,41.9366041569191,46.5371813792696,38.1633809923629,41.8035779300568,42.2215595029962,27.1952841909355,31.9646777462374,30.6289788398253,94.5642975028095,103.615130947508,41.8034110710522,87.3549408127131,30.6042972833769,35.5299257309941,42.0075625578958,29.6321309461165,36.3161838754302,40.7630204335919,36.0281524490656,39.1622849601158,38.7382022387593,77.4384372576555,32.7881596831101,20.2994788180671,39.0928702448583,35.1386361931501,43.8058956521877,23.0641604347232,20.5580018736031,22.255399411196,20.6711325016541,29.513774202617,29.9776820075137,34.535704300363,25.6678112436999,33.8159330991323,39.0048851727495,34.0347292719017,34.3844001811326,34.5717300540116,21.60290019172,28.2924886241702,37.4187892985197,37.814189331639,38.5044708208963,31.3598897588037,21.5897971418614,29.8683219917986,32.8587313101893,48.3116721118537,38.4285335536255,30.8802175632158,24.7100752086493,28.2322347561505,39.9328746182896,93.8252028173179,23.7510524309015,31.577190798373,29.8163189065236,17.5182665014363,19.4105803363856,20.132479242174,36.2054055886912,39.7462124599189,37.4521929009988,21.9574242143476,31.9499353516947,29.0746837991394,3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| |||
|short_description=p1@Zyg11b | |||
}} |
Revision as of 12:39, 4 August 2015
Short description: | p1@Zyg11b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zyg11b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000043616, ENSMUST00000163293, NM_001033634, uc008uax.2, uc008uay.2_5end |
EntrezGene: | 414872 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.91e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-12 | 23 |
neuron | 1.77e-09 | 33 |
neuronal stem cell | 1.77e-09 | 33 |
neuroblast | 1.77e-09 | 33 |
electrically signaling cell | 1.77e-09 | 33 |