FFCP PHASE1:Mm9::chr14:65206851..65206895,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=268755,100526520|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-56bp_to_ENSMUST00000164645,NR_040709,uc007uil.1_5end|description=CAGE_peak_1_at_A930011O12Rik_5end,CAGE_peak_1_at_Mir3078_5end|id=chr14:65206851..65206895,+|ontology_enrichment_celltype=CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000117!1.02e-15!23;CL:0000337!1.02e-15!23;CL:0000221!4.89e-15!44;CL:0000133!4.89e-15!44;CL:0002319!4.99e-15!43;CL:0000393!9.88e-13!39;CL:0000211!9.88e-13!39;CL:0000055!5.54e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-19,23;CL:0000337,6.27e-19,23;CL:0000540,4.35e-17,33;CL:0000047,4.35e-17,33;CL:0000031,4.35e-17,33;CL:0000404,4.35e-17,33;CL:0000393,5.92e-13,39;CL:0000211,5.92e-13,39;CL:0002319,1.48e-12,43;CL:0000221,4.78e-12,44;CL:0000133,4.78e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.33e-35!75;UBERON:0001016!3.33e-35!75;UBERON:0001017!6.87e-35!73;UBERON:0005743!6.87e-35!73;UBERON:0004121!7.08e-34!102;UBERON:0000924!7.08e-34!102;UBERON:0006601!7.08e-34!102;UBERON:0002346!2.02e-32!71;UBERON:0003075!2.02e-32!71;UBERON:0007284!2.02e-32!71;UBERON:0000033!1.11e-30!63;UBERON:0001049!4.56e-27!52;UBERON:0005068!4.56e-27!52;UBERON:0006241!4.56e-27!52;UBERON:0007135!4.56e-27!52;UBERON:0003056!1.12e-26!49;UBERON:0000955!1.47e-26!50;UBERON:0006238!1.47e-26!50;UBERON:0002616!1.23e-25!49;UBERON:0002020!7.53e-22!34;UBERON:0003080!6.12e-21!40;UBERON:0002780!3.80e-20!39;UBERON:0001890!3.80e-20!39;UBERON:0006240!3.80e-20!39;UBERON:0002791!3.68e-19!29;UBERON:0003528!3.68e-19!29;UBERON:0001893!3.68e-19!29;UBERON:0007811!4.10e-16!86;UBERON:0000956!6.84e-14!21;UBERON:0001869!6.84e-14!21;UBERON:0000203!6.84e-14!21;UBERON:0000153!6.69e-13!94;UBERON:0002619!4.53e-11!17;UBERON:0002021!6.71e-10!10;UBERON:0000411!6.71e-10!10;UBERON:0001950!6.71e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.04e-37,64;UBERON:0003075,3.04e-37,64;UBERON:0007284,3.04e-37,64;UBERON:0001017,1.43e-32,73;UBERON:0004121,1.64e-31,95;UBERON:0000924,1.64e-31,95;UBERON:0006601,1.64e-31,95;UBERON:0001016,3.73e-31,75;UBERON:0000073,2.80e-30,54;UBERON:0010371,3.68e-30,73;UBERON:0001049,1.82e-28,52;UBERON:0005068,1.82e-28,52;UBERON:0006241,1.82e-28,52;UBERON:0007135,1.82e-28,52;UBERON:0003056,9.60e-28,49;UBERON:0002020,7.58e-27,34;UBERON:0000955,2.95e-25,47;UBERON:0006238,2.95e-25,47;UBERON:0002616,3.39e-24,46;UBERON:0003528,1.52e-23,29;UBERON:0002791,1.52e-23,29;UBERON:0001893,1.52e-23,29;UBERON:0003080,6.32e-21,40;UBERON:0002780,5.31e-20,39;UBERON:0001890,5.31e-20,39;UBERON:0006240,5.31e-20,39;UBERON:0010314,6.63e-20,92;UBERON:0000956,4.60e-17,21;UBERON:0001869,4.60e-17,21;UBERON:0000203,4.60e-17,21;UBERON:0002619,1.36e-13,17;UBERON:0002021,8.67e-12,10;UBERON:0000411,8.67e-12,10;UBERON:0001950,8.67e-12,10;UBERON:0003076,5.78e-08,12;UBERON:0003057,5.78e-08,12;UBERON:0000970,1.37e-07,9;UBERON:0000019,1.37e-07,9;UBERON:0000047,1.37e-07,9;UBERON:0010312,1.37e-07,9;UBERON:0004088,1.37e-07,9;UBERON:0002104,1.37e-07,9;UBERON:0001456,1.37e-07,9;UBERON:0003072,1.37e-07,9;UBERON:0004128,1.37e-07,9;UBERON:0003071,1.37e-07,9;UBERON:0002420,1.38e-07,8;UBERON:0007245,1.38e-07,8;UBERON:0010009,1.38e-07,8;UBERON:0010011,1.38e-07,8;UBERON:0000454,1.38e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,0,0,0,0,0,0,0,26.7057728334669,32.797440714866,17.747279298173,0,0,0,0,0,0.299600110518405,3.45796474789399,23.7449212186414,31.0513658162889,22.0841209418951,6.28432165688368,11.0434270475807,27.3154482249348,57.8906644950148,41.3648453974509,20.9220173898839,26.3035916455487,24.2698322544865,23.2119866405141,27.9952189423374,19.7947080811569,36.2937898701795,16.8828783009504,19.7109739632085,6.77645746589436,8.82704420954438,16.4031512326265,0.227178579999552,0.604572480854284,0,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,241.544157534526,208.190026572574,0.255457055208591,0,0,0,40.7430539181118,35.6850470198529,13.6963243803022,71.4417955990256,49.8645141794145,34.492815396887,32.9349764027548,0,0,0,27.5678831211281,3.77349284591841,6.66716102857071,5.58192602396583,13.1113191517072,18.5739642683125,24.3416068541215,20.2395725049014,63.8997325725369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3442332833414,19.2431625149262,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8119485279613,22.7390671988874,0,0,1.26203287766503,3.90438744296638,3.66219776145758,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,2.63030272120181,3.16230222357219,76.4744733083901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.62054984628179,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,1.48094118541909,0,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0,19.284231409093,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.3817100583456,66.2868340570335,64.1642975052124,89.8792143657486,71.9336645759174,64.2084812781245,63.4521150217897,85.1107074093777,97.425617931604,85.9482117508021,1.14166082342594,7.18244772121856,10.0732827394939,4.37592090722929,2.09613162627982,2.5738091183002,4.22268782823069,3.09052585858341,5.13470735346904,3.53776096469316,3.29523089857312,3.9611531691076,3.65201879132541,3.77748399188729,3.50356360629241,5.71552429539688,2.20180219295225,2.50781986602817,2.88460130562315,2.50238164228475,2.05721551431249,4.08194354166476,3.57654284920981,3.63366041580821,3.19971893412124,3.9768865709088,4.93905526756486,3.41990624869196,2.98769050460896,2.80571135828869,4.1522256343461,2.65962102414021,3.27384834535751,4.18329471202108,4.05103883060397,10.7418548513317,4.21076895201735,1.93383948643468,0.57386499620653,0.661774257358546,0|short_description=p1@A930011O12Rik,p1@Mir3078}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268755,entrezgene:100526520 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_ENSMUST00000164645,NR_040709,uc007uil.1_5end | |||
|cluster_id=chr14:65206851..65206895,+ | |||
|description=CAGE_peak_1_at_A930011O12Rik_5end,CAGE_peak_1_at_Mir3078_5end | |||
|id=chr14:65206851..65206895,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000117!1.02e-15!23;CL:0000337!1.02e-15!23;CL:0000221!4.89e-15!44;CL:0000133!4.89e-15!44;CL:0002319!4.99e-15!43;CL:0000393!9.88e-13!39;CL:0000211!9.88e-13!39;CL:0000055!5.54e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-19,23;CL:0000337,6.27e-19,23;CL:0000540,4.35e-17,33;CL:0000047,4.35e-17,33;CL:0000031,4.35e-17,33;CL:0000404,4.35e-17,33;CL:0000393,5.92e-13,39;CL:0000211,5.92e-13,39;CL:0002319,1.48e-12,43;CL:0000221,4.78e-12,44;CL:0000133,4.78e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.33e-35!75;UBERON:0001016!3.33e-35!75;UBERON:0001017!6.87e-35!73;UBERON:0005743!6.87e-35!73;UBERON:0004121!7.08e-34!102;UBERON:0000924!7.08e-34!102;UBERON:0006601!7.08e-34!102;UBERON:0002346!2.02e-32!71;UBERON:0003075!2.02e-32!71;UBERON:0007284!2.02e-32!71;UBERON:0000033!1.11e-30!63;UBERON:0001049!4.56e-27!52;UBERON:0005068!4.56e-27!52;UBERON:0006241!4.56e-27!52;UBERON:0007135!4.56e-27!52;UBERON:0003056!1.12e-26!49;UBERON:0000955!1.47e-26!50;UBERON:0006238!1.47e-26!50;UBERON:0002616!1.23e-25!49;UBERON:0002020!7.53e-22!34;UBERON:0003080!6.12e-21!40;UBERON:0002780!3.80e-20!39;UBERON:0001890!3.80e-20!39;UBERON:0006240!3.80e-20!39;UBERON:0002791!3.68e-19!29;UBERON:0003528!3.68e-19!29;UBERON:0001893!3.68e-19!29;UBERON:0007811!4.10e-16!86;UBERON:0000956!6.84e-14!21;UBERON:0001869!6.84e-14!21;UBERON:0000203!6.84e-14!21;UBERON:0000153!6.69e-13!94;UBERON:0002619!4.53e-11!17;UBERON:0002021!6.71e-10!10;UBERON:0000411!6.71e-10!10;UBERON:0001950!6.71e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.04e-37,64;UBERON:0003075,3.04e-37,64;UBERON:0007284,3.04e-37,64;UBERON:0001017,1.43e-32,73;UBERON:0004121,1.64e-31,95;UBERON:0000924,1.64e-31,95;UBERON:0006601,1.64e-31,95;UBERON:0001016,3.73e-31,75;UBERON:0000073,2.80e-30,54;UBERON:0010371,3.68e-30,73;UBERON:0001049,1.82e-28,52;UBERON:0005068,1.82e-28,52;UBERON:0006241,1.82e-28,52;UBERON:0007135,1.82e-28,52;UBERON:0003056,9.60e-28,49;UBERON:0002020,7.58e-27,34;UBERON:0000955,2.95e-25,47;UBERON:0006238,2.95e-25,47;UBERON:0002616,3.39e-24,46;UBERON:0003528,1.52e-23,29;UBERON:0002791,1.52e-23,29;UBERON:0001893,1.52e-23,29;UBERON:0003080,6.32e-21,40;UBERON:0002780,5.31e-20,39;UBERON:0001890,5.31e-20,39;UBERON:0006240,5.31e-20,39;UBERON:0010314,6.63e-20,92;UBERON:0000956,4.60e-17,21;UBERON:0001869,4.60e-17,21;UBERON:0000203,4.60e-17,21;UBERON:0002619,1.36e-13,17;UBERON:0002021,8.67e-12,10;UBERON:0000411,8.67e-12,10;UBERON:0001950,8.67e-12,10;UBERON:0003076,5.78e-08,12;UBERON:0003057,5.78e-08,12;UBERON:0000970,1.37e-07,9;UBERON:0000019,1.37e-07,9;UBERON:0000047,1.37e-07,9;UBERON:0010312,1.37e-07,9;UBERON:0004088,1.37e-07,9;UBERON:0002104,1.37e-07,9;UBERON:0001456,1.37e-07,9;UBERON:0003072,1.37e-07,9;UBERON:0004128,1.37e-07,9;UBERON:0003071,1.37e-07,9;UBERON:0002420,1.38e-07,8;UBERON:0007245,1.38e-07,8;UBERON:0010009,1.38e-07,8;UBERON:0010011,1.38e-07,8;UBERON:0000454,1.38e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,0,0,0,0,0,0,0,26.7057728334669,32.797440714866,17.747279298173,0,0,0,0,0,0.299600110518405,3.45796474789399,23.7449212186414,31.0513658162889,22.0841209418951,6.28432165688368,11.0434270475807,27.3154482249348,57.8906644950148,41.3648453974509,20.9220173898839,26.3035916455487,24.2698322544865,23.2119866405141,27.9952189423374,19.7947080811569,36.2937898701795,16.8828783009504,19.7109739632085,6.77645746589436,8.82704420954438,16.4031512326265,0.227178579999552,0.604572480854284,0,0,0,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0,0.608930956624282,0.691846491768175,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,241.544157534526,208.190026572574,0.255457055208591,0,0,0,40.7430539181118,35.6850470198529,13.6963243803022,71.4417955990256,49.8645141794145,34.492815396887,32.9349764027548,0,0,0,27.5678831211281,3.77349284591841,6.66716102857071,5.58192602396583,13.1113191517072,18.5739642683125,24.3416068541215,20.2395725049014,63.8997325725369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3442332833414,19.2431625149262,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8119485279613,22.7390671988874,0,0,1.26203287766503,3.90438744296638,3.66219776145758,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,2.63030272120181,3.16230222357219,76.4744733083901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.62054984628179,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,1.48094118541909,0,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0,19.284231409093,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.3817100583456,66.2868340570335,64.1642975052124,89.8792143657486,71.9336645759174,64.2084812781245,63.4521150217897,85.1107074093777,97.425617931604,85.9482117508021,1.14166082342594,7.18244772121856,10.0732827394939,4.37592090722929,2.09613162627982,2.5738091183002,4.22268782823069,3.09052585858341,5.13470735346904,3.53776096469316,3.29523089857312,3.9611531691076,3.65201879132541,3.77748399188729,3.50356360629241,5.71552429539688,2.20180219295225,2.50781986602817,2.88460130562315,2.50238164228475,2.05721551431249,4.08194354166476,3.57654284920981,3.63366041580821,3.19971893412124,3.9768865709088,4.93905526756486,3.41990624869196,2.98769050460896,2.80571135828869,4.1522256343461,2.65962102414021,3.27384834535751,4.18329471202108,4.05103883060397,10.7418548513317,4.21076895201735,1.93383948643468,0.57386499620653,0.661774257358546,0 | |||
|short_description=p1@A930011O12Rik,p1@Mir3078 | |||
}} |
Revision as of 15:48, 4 August 2015
Short description: | p1@A930011O12Rik, p1@Mir3078 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A930011O12Rik_5end, CAGE_peak_1_at_Mir3078_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -56bp_to_ENSMUST00000164645, NR_040709, uc007uil.1_5end |
EntrezGene: | 268755,100526520 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.27e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-19 | 23 |
neuron | 4.35e-17 | 33 |
neuronal stem cell | 4.35e-17 | 33 |
neuroblast | 4.35e-17 | 33 |
electrically signaling cell | 4.35e-17 | 33 |
electrically responsive cell | 5.92e-13 | 39 |
electrically active cell | 5.92e-13 | 39 |
neural cell | 1.48e-12 | 43 |
ectodermal cell | 4.78e-12 | 44 |
neurectodermal cell | 4.78e-12 | 44 |