FFCP PHASE1:Mm9::chr11:101017198..101017235,+: Difference between revisions
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{{FFCP|EntrezGene=103768|HGNC=|MCL_coexpression_id=1|UniProt=Q8VCK3,Q6F4J0|association_with_transcript=0bp_to_ENSMUST00000043654,NM_134028,uc007lnm.2,uc007lnn.1_5end|description=CAGE_peak_2_at_Tubg2_5end|id=chr11:101017198..101017235,+|ontology_enrichment_celltype=CL:0000117!4.62e-13!23;CL:0000337!4.62e-13!23;CL:0000393!2.23e-10!39;CL:0000211!2.23e-10!39;CL:0000055!7.19e-10!50;CL:0000221!9.45e-10!44;CL:0000133!9.45e-10!44;CL:0002319!1.14e-09!43;CL:0000540!1.67e-09!33;CL:0000047!1.67e-09!33;CL:0000031!1.67e-09!33;CL:0000404!1.67e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-15,23;CL:0000337,4.78e-15,23;CL:0000393,3.71e-11,39;CL:0000211,3.71e-11,39;CL:0000221,2.84e-10,44;CL:0000133,2.84e-10,44;CL:0000540,3.18e-10,33;CL:0000047,3.18e-10,33;CL:0000031,3.18e-10,33;CL:0000404,3.18e-10,33;CL:0002319,3.57e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.59e-26!73;UBERON:0005743!2.59e-26!73;UBERON:0001049!1.48e-25!52;UBERON:0005068!1.48e-25!52;UBERON:0006241!1.48e-25!52;UBERON:0007135!1.48e-25!52;UBERON:0000073!3.02e-25!75;UBERON:0001016!3.02e-25!75;UBERON:0000955!1.08e-24!50;UBERON:0006238!1.08e-24!50;UBERON:0002616!4.41e-24!49;UBERON:0000033!6.77e-24!63;UBERON:0004121!1.95e-22!102;UBERON:0000924!1.95e-22!102;UBERON:0006601!1.95e-22!102;UBERON:0002346!2.26e-22!71;UBERON:0003075!2.26e-22!71;UBERON:0007284!2.26e-22!71;UBERON:0002020!1.99e-19!34;UBERON:0003080!6.24e-19!40;UBERON:0002780!3.27e-18!39;UBERON:0001890!3.27e-18!39;UBERON:0006240!3.27e-18!39;UBERON:0003056!5.17e-18!49;UBERON:0002791!9.45e-17!29;UBERON:0003528!9.45e-17!29;UBERON:0001893!9.45e-17!29;UBERON:0007811!3.16e-13!86;UBERON:0000153!6.55e-13!94;UBERON:0000956!2.57e-12!21;UBERON:0001869!2.57e-12!21;UBERON:0000203!2.57e-12!21;UBERON:0002619!2.83e-10!17;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0003076!3.57e-07!12;UBERON:0003057!3.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-31,54;UBERON:0001017,7.94e-30,73;UBERON:0001049,9.09e-30,52;UBERON:0005068,9.09e-30,52;UBERON:0006241,9.09e-30,52;UBERON:0007135,9.09e-30,52;UBERON:0001016,3.61e-28,75;UBERON:0002346,1.08e-26,64;UBERON:0003075,1.08e-26,64;UBERON:0007284,1.08e-26,64;UBERON:0000955,3.29e-26,47;UBERON:0006238,3.29e-26,47;UBERON:0002616,1.66e-25,46;UBERON:0004121,5.33e-23,95;UBERON:0000924,5.33e-23,95;UBERON:0006601,5.33e-23,95;UBERON:0010371,1.20e-22,73;UBERON:0002020,1.62e-22,34;UBERON:0003080,5.51e-22,40;UBERON:0002780,3.86e-21,39;UBERON:0001890,3.86e-21,39;UBERON:0006240,3.86e-21,39;UBERON:0003056,9.14e-21,49;UBERON:0010314,1.68e-19,92;UBERON:0003528,2.24e-19,29;UBERON:0002791,2.24e-19,29;UBERON:0001893,2.24e-19,29;UBERON:0000956,3.58e-14,21;UBERON:0001869,3.58e-14,21;UBERON:0000203,3.58e-14,21;UBERON:0002619,8.87e-12,17;UBERON:0002021,9.36e-09,10;UBERON:0000411,9.36e-09,10;UBERON:0001950,9.36e-09,10;UBERON:0003076,3.80e-08,12;UBERON:0003057,3.80e-08,12;UBERON:0004111,5.02e-07,122;UBERON:0000025,5.68e-07,114|phase1_expression=2.7225304007815,0,0,0,0,0.33575854382378,0.700837921786577,1.16210991097419,0,0,0,0,0.684802919724823,1.92324885321794,0,0.404950534779652,0,2.99689057090326,2.74228867211478,2.97072756258621,5.18764069921526,0.198581902401771,0,0.799962113967033,1.37645568640302,0,0,0.215471232685889,0,0.252030129759931,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,3.65100772129174,2.83855407414641,0.550640256485045,2.34717403304412,1.74420125104357,3.07560655828261,1.36100929351998,1.53985063787899,1.43752564364972,0.167782606057736,0,0,1.80081605225163,1.71920063963254,2.06268836910977,6.67644320836673,8.46385566835253,5.70448263155561,1.0165335962074,1.77858959222228,0.449949858640699,0.988866362566974,0,1.19840044207362,1.15265491596466,5.91030790158323,9.99043943654511,8.41299845405528,12.2829923293636,12.1477697523387,7.59442955132715,6.70918297127655,11.9498442259303,24.2254938198655,23.6221575457597,23.8090126547177,6.19865552331911,7.13603620098795,7.29278718779464,30.7101298901519,18.0084035210138,23.0725354142983,11.7851434189467,14.0947963991112,9.13357284543973,0.227178579999552,0.982430281388212,0.579728977403356,0,0,0,0,0,1.54488862144927,1.70430322578058,1.29893002301434,1.7666978725517,1.40843419776681,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,1.1418387971906,0.776813650941515,2.67195850316685,1.21439728736295,0.304465478312141,0.691846491768175,1.05505848386836,1.05829836422134,2.89033160058254,0.741584903203122,1.15679485535929,0,0.808834249737046,0.883366073841574,1.93950101254089,0,19.6163133997737,15.7085030110091,0.510914110417183,0,0,0,27.861058929297,15.0975198930147,16.2094114225595,24.509229147111,24.8043993610421,20.1554403222773,18.6577452527921,0.407357455401265,0.746441823660558,1.0108910337347,2.10441855886474,0.390361328888111,0.459804208866946,0.540186389416048,1.35634336052144,2.4493139694478,1.66547836370305,2.34254311399322,2.58703370739016,0.862271971731369,0.94553040083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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:103768 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VCK3,uniprot:Q6F4J0 | |||
|association_with_transcript=0bp_to_ENSMUST00000043654,NM_134028,uc007lnm.2,uc007lnn.1_5end | |||
|cluster_id=chr11:101017198..101017235,+ | |||
|description=CAGE_peak_2_at_Tubg2_5end | |||
|id=chr11:101017198..101017235,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.62e-13!23;CL:0000337!4.62e-13!23;CL:0000393!2.23e-10!39;CL:0000211!2.23e-10!39;CL:0000055!7.19e-10!50;CL:0000221!9.45e-10!44;CL:0000133!9.45e-10!44;CL:0002319!1.14e-09!43;CL:0000540!1.67e-09!33;CL:0000047!1.67e-09!33;CL:0000031!1.67e-09!33;CL:0000404!1.67e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-15,23;CL:0000337,4.78e-15,23;CL:0000393,3.71e-11,39;CL:0000211,3.71e-11,39;CL:0000221,2.84e-10,44;CL:0000133,2.84e-10,44;CL:0000540,3.18e-10,33;CL:0000047,3.18e-10,33;CL:0000031,3.18e-10,33;CL:0000404,3.18e-10,33;CL:0002319,3.57e-10,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-26!73;UBERON:0005743!2.59e-26!73;UBERON:0001049!1.48e-25!52;UBERON:0005068!1.48e-25!52;UBERON:0006241!1.48e-25!52;UBERON:0007135!1.48e-25!52;UBERON:0000073!3.02e-25!75;UBERON:0001016!3.02e-25!75;UBERON:0000955!1.08e-24!50;UBERON:0006238!1.08e-24!50;UBERON:0002616!4.41e-24!49;UBERON:0000033!6.77e-24!63;UBERON:0004121!1.95e-22!102;UBERON:0000924!1.95e-22!102;UBERON:0006601!1.95e-22!102;UBERON:0002346!2.26e-22!71;UBERON:0003075!2.26e-22!71;UBERON:0007284!2.26e-22!71;UBERON:0002020!1.99e-19!34;UBERON:0003080!6.24e-19!40;UBERON:0002780!3.27e-18!39;UBERON:0001890!3.27e-18!39;UBERON:0006240!3.27e-18!39;UBERON:0003056!5.17e-18!49;UBERON:0002791!9.45e-17!29;UBERON:0003528!9.45e-17!29;UBERON:0001893!9.45e-17!29;UBERON:0007811!3.16e-13!86;UBERON:0000153!6.55e-13!94;UBERON:0000956!2.57e-12!21;UBERON:0001869!2.57e-12!21;UBERON:0000203!2.57e-12!21;UBERON:0002619!2.83e-10!17;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0003076!3.57e-07!12;UBERON:0003057!3.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-31,54;UBERON:0001017,7.94e-30,73;UBERON:0001049,9.09e-30,52;UBERON:0005068,9.09e-30,52;UBERON:0006241,9.09e-30,52;UBERON:0007135,9.09e-30,52;UBERON:0001016,3.61e-28,75;UBERON:0002346,1.08e-26,64;UBERON:0003075,1.08e-26,64;UBERON:0007284,1.08e-26,64;UBERON:0000955,3.29e-26,47;UBERON:0006238,3.29e-26,47;UBERON:0002616,1.66e-25,46;UBERON:0004121,5.33e-23,95;UBERON:0000924,5.33e-23,95;UBERON:0006601,5.33e-23,95;UBERON:0010371,1.20e-22,73;UBERON:0002020,1.62e-22,34;UBERON:0003080,5.51e-22,40;UBERON:0002780,3.86e-21,39;UBERON:0001890,3.86e-21,39;UBERON:0006240,3.86e-21,39;UBERON:0003056,9.14e-21,49;UBERON:0010314,1.68e-19,92;UBERON:0003528,2.24e-19,29;UBERON:0002791,2.24e-19,29;UBERON:0001893,2.24e-19,29;UBERON:0000956,3.58e-14,21;UBERON:0001869,3.58e-14,21;UBERON:0000203,3.58e-14,21;UBERON:0002619,8.87e-12,17;UBERON:0002021,9.36e-09,10;UBERON:0000411,9.36e-09,10;UBERON:0001950,9.36e-09,10;UBERON:0003076,3.80e-08,12;UBERON:0003057,3.80e-08,12;UBERON:0004111,5.02e-07,122;UBERON:0000025,5.68e-07,114 | |||
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| |||
|short_description=p2@Tubg2 | |||
}} |
Revision as of 04:06, 5 August 2015
Short description: | p2@Tubg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tubg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000043654, NM_134028, uc007lnm.2, uc007lnn.1_5end |
EntrezGene: | 103768 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.78e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.78e-15 | 23 |
electrically responsive cell | 3.71e-11 | 39 |
electrically active cell | 3.71e-11 | 39 |
ectodermal cell | 2.84e-10 | 44 |
neurectodermal cell | 2.84e-10 | 44 |
neuron | 3.18e-10 | 33 |
neuronal stem cell | 3.18e-10 | 33 |
neuroblast | 3.18e-10 | 33 |
electrically signaling cell | 3.18e-10 | 33 |
neural cell | 3.57e-10 | 43 |