FFCP PHASE1:Mm9::chr4:151712728..151712818,+: Difference between revisions
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{{FFCP|EntrezGene=269610|HGNC=|MCL_coexpression_id=60|UniProt=E9PYL1,E9PYU4,A2A8L1|association_with_transcript=0bp_to_ENSMUST00000030775,ENSMUST00000164662,NM_001081376,NM_029216,uc008wai.1,uc012dqc.1_5end|description=CAGE_peak_1_at_Chd5_5end|id=chr4:151712728..151712818,+|ontology_enrichment_celltype=CL:0000117!3.67e-13!23;CL:0000337!3.67e-13!23;CL:0000540!9.23e-13!33;CL:0000047!9.23e-13!33;CL:0000031!9.23e-13!33;CL:0000404!9.23e-13!33;CL:0000221!7.54e-11!44;CL:0000133!7.54e-11!44;CL:0002319!8.15e-11!43;CL:0000393!1.92e-08!39;CL:0000211!1.92e-08!39;CL:0000055!4.73e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.71e-16,23;CL:0000337,6.71e-16,23;CL:0000540,4.73e-13,33;CL:0000047,4.73e-13,33;CL:0000031,4.73e-13,33;CL:0000404,4.73e-13,33;CL:0000393,2.00e-09,39;CL:0000211,2.00e-09,39;CL:0002319,6.06e-09,43;CL:0000221,1.65e-08,44;CL:0000133,1.65e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.47e-28!73;UBERON:0005743!4.47e-28!73;UBERON:0000073!6.91e-28!75;UBERON:0001016!6.91e-28!75;UBERON:0004121!4.08e-26!102;UBERON:0000924!4.08e-26!102;UBERON:0006601!4.08e-26!102;UBERON:0002346!2.80e-25!71;UBERON:0003075!2.80e-25!71;UBERON:0007284!2.80e-25!71;UBERON:0001049!7.93e-24!52;UBERON:0005068!7.93e-24!52;UBERON:0006241!7.93e-24!52;UBERON:0007135!7.93e-24!52;UBERON:0000955!3.81e-23!50;UBERON:0006238!3.81e-23!50;UBERON:0002616!2.21e-22!49;UBERON:0000033!5.10e-22!63;UBERON:0003080!9.25e-20!40;UBERON:0003056!2.15e-19!49;UBERON:0002020!4.75e-19!34;UBERON:0002780!4.84e-19!39;UBERON:0001890!4.84e-19!39;UBERON:0006240!4.84e-19!39;UBERON:0002791!2.04e-16!29;UBERON:0003528!2.04e-16!29;UBERON:0001893!2.04e-16!29;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0007811!2.85e-10!86;UBERON:0002619!8.78e-10!17;UBERON:0000153!2.52e-09!94;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.15e-29,73;UBERON:0000073,1.49e-28,54;UBERON:0001016,6.24e-28,75;UBERON:0001049,7.58e-27,52;UBERON:0005068,7.58e-27,52;UBERON:0006241,7.58e-27,52;UBERON:0007135,7.58e-27,52;UBERON:0002346,2.38e-26,64;UBERON:0003075,2.38e-26,64;UBERON:0007284,2.38e-26,64;UBERON:0000955,1.57e-23,47;UBERON:0006238,1.57e-23,47;UBERON:0004121,7.67e-23,95;UBERON:0000924,7.67e-23,95;UBERON:0006601,7.67e-23,95;UBERON:0002616,1.25e-22,46;UBERON:0003080,5.08e-22,40;UBERON:0010371,6.27e-22,73;UBERON:0002020,1.30e-21,34;UBERON:0003056,1.70e-21,49;UBERON:0002780,3.77e-21,39;UBERON:0001890,3.77e-21,39;UBERON:0006240,3.77e-21,39;UBERON:0003528,2.26e-18,29;UBERON:0002791,2.26e-18,29;UBERON:0001893,2.26e-18,29;UBERON:0010314,2.25e-16,92;UBERON:0000956,1.87e-12,21;UBERON:0001869,1.87e-12,21;UBERON:0000203,1.87e-12,21;UBERON:0002619,2.96e-10,17;UBERON:0002021,4.17e-09,10;UBERON:0000411,4.17e-09,10;UBERON:0001950,4.17e-09,10;UBERON:0002420,3.28e-07,8;UBERON:0007245,3.28e-07,8;UBERON:0010009,3.28e-07,8;UBERON:0010011,3.28e-07,8;UBERON:0000454,3.28e-07,8|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,61.2311689087702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0,2.87505128729943,0,0,0,0,0,0,31.1567349723781,25.9205579843296,25.3532561402472,0,0,0,0,0,0.299600110518405,2.68952813725088,4.76972216618997,7.1553147315796,6.73039876324422,14.2825492201902,18.3320888989839,13.4739879136449,10.7346927540425,11.0306254393203,26.4278114398533,43.4136949489638,42.0881901122107,33.367230795739,36.6865450845663,39.5894161623138,22.8930059181132,36.0168070420275,41.5611233952923,21.5078867395777,20.5015220350708,20.3175395949578,0.454357159999104,0.604572480854284,0,0,0,0.539703191637817,0,0,7.16266542671934,0,0,0,0.985903938436763,0,2.54805239706646,0,0,0,0,11.7609396110632,0,4.60170631100957,0.693941307064543,2.74018930480927,2.53677046981664,3.01445281105245,3.99801604261396,1.25666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,7.02673912827713,4.39838084308256,0.510914110417183,0,0,0,43.5890760668034,34.312545211397,40.8376644366809,83.2618493721004,87.454686406973,42.1809730455907,44.2918648174978,0.101839363850316,0.124406970610093,1.76905930903572,4.41927897361595,0,0,0.900310649026746,1.9591626318643,4.96666443804693,4.48398020996974,2.81105173679186,10.6068382002996,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,60.7737951350328,52.0697338639179,0,0.264450566663544,0.213288250535234,0.464473343720877,0.515469845288373,1.4117846723634,1.33426826306922,0.760902504450237,0.474529061544512,0.823494773620054,2.26201687920243,0.994782360205754,1.75467678407208,2.69645822596266,0.648414149624083,0.796565093017469,0,0.571242563048644,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.15699872784137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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269610 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYL1,uniprot:E9PYU4,uniprot:A2A8L1 | |||
|association_with_transcript=0bp_to_ENSMUST00000030775,ENSMUST00000164662,NM_001081376,NM_029216,uc008wai.1,uc012dqc.1_5end | |||
|cluster_id=chr4:151712728..151712818,+ | |||
|description=CAGE_peak_1_at_Chd5_5end | |||
|id=chr4:151712728..151712818,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.67e-13!23;CL:0000337!3.67e-13!23;CL:0000540!9.23e-13!33;CL:0000047!9.23e-13!33;CL:0000031!9.23e-13!33;CL:0000404!9.23e-13!33;CL:0000221!7.54e-11!44;CL:0000133!7.54e-11!44;CL:0002319!8.15e-11!43;CL:0000393!1.92e-08!39;CL:0000211!1.92e-08!39;CL:0000055!4.73e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.71e-16,23;CL:0000337,6.71e-16,23;CL:0000540,4.73e-13,33;CL:0000047,4.73e-13,33;CL:0000031,4.73e-13,33;CL:0000404,4.73e-13,33;CL:0000393,2.00e-09,39;CL:0000211,2.00e-09,39;CL:0002319,6.06e-09,43;CL:0000221,1.65e-08,44;CL:0000133,1.65e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.47e-28!73;UBERON:0005743!4.47e-28!73;UBERON:0000073!6.91e-28!75;UBERON:0001016!6.91e-28!75;UBERON:0004121!4.08e-26!102;UBERON:0000924!4.08e-26!102;UBERON:0006601!4.08e-26!102;UBERON:0002346!2.80e-25!71;UBERON:0003075!2.80e-25!71;UBERON:0007284!2.80e-25!71;UBERON:0001049!7.93e-24!52;UBERON:0005068!7.93e-24!52;UBERON:0006241!7.93e-24!52;UBERON:0007135!7.93e-24!52;UBERON:0000955!3.81e-23!50;UBERON:0006238!3.81e-23!50;UBERON:0002616!2.21e-22!49;UBERON:0000033!5.10e-22!63;UBERON:0003080!9.25e-20!40;UBERON:0003056!2.15e-19!49;UBERON:0002020!4.75e-19!34;UBERON:0002780!4.84e-19!39;UBERON:0001890!4.84e-19!39;UBERON:0006240!4.84e-19!39;UBERON:0002791!2.04e-16!29;UBERON:0003528!2.04e-16!29;UBERON:0001893!2.04e-16!29;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0007811!2.85e-10!86;UBERON:0002619!8.78e-10!17;UBERON:0000153!2.52e-09!94;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.15e-29,73;UBERON:0000073,1.49e-28,54;UBERON:0001016,6.24e-28,75;UBERON:0001049,7.58e-27,52;UBERON:0005068,7.58e-27,52;UBERON:0006241,7.58e-27,52;UBERON:0007135,7.58e-27,52;UBERON:0002346,2.38e-26,64;UBERON:0003075,2.38e-26,64;UBERON:0007284,2.38e-26,64;UBERON:0000955,1.57e-23,47;UBERON:0006238,1.57e-23,47;UBERON:0004121,7.67e-23,95;UBERON:0000924,7.67e-23,95;UBERON:0006601,7.67e-23,95;UBERON:0002616,1.25e-22,46;UBERON:0003080,5.08e-22,40;UBERON:0010371,6.27e-22,73;UBERON:0002020,1.30e-21,34;UBERON:0003056,1.70e-21,49;UBERON:0002780,3.77e-21,39;UBERON:0001890,3.77e-21,39;UBERON:0006240,3.77e-21,39;UBERON:0003528,2.26e-18,29;UBERON:0002791,2.26e-18,29;UBERON:0001893,2.26e-18,29;UBERON:0010314,2.25e-16,92;UBERON:0000956,1.87e-12,21;UBERON:0001869,1.87e-12,21;UBERON:0000203,1.87e-12,21;UBERON:0002619,2.96e-10,17;UBERON:0002021,4.17e-09,10;UBERON:0000411,4.17e-09,10;UBERON:0001950,4.17e-09,10;UBERON:0002420,3.28e-07,8;UBERON:0007245,3.28e-07,8;UBERON:0010009,3.28e-07,8;UBERON:0010011,3.28e-07,8;UBERON:0000454,3.28e-07,8 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,61.2311689087702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0,2.87505128729943,0,0,0,0,0,0,31.1567349723781,25.9205579843296,25.3532561402472,0,0,0,0,0,0.299600110518405,2.68952813725088,4.76972216618997,7.1553147315796,6.73039876324422,14.2825492201902,18.3320888989839,13.4739879136449,10.7346927540425,11.0306254393203,26.4278114398533,43.4136949489638,42.0881901122107,33.367230795739,36.6865450845663,39.5894161623138,22.8930059181132,36.0168070420275,41.5611233952923,21.5078867395777,20.5015220350708,20.3175395949578,0.454357159999104,0.604572480854284,0,0,0,0.539703191637817,0,0,7.16266542671934,0,0,0,0.985903938436763,0,2.54805239706646,0,0,0,0,11.7609396110632,0,4.60170631100957,0.693941307064543,2.74018930480927,2.53677046981664,3.01445281105245,3.99801604261396,1.25666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,7.02673912827713,4.39838084308256,0.510914110417183,0,0,0,43.5890760668034,34.312545211397,40.8376644366809,83.2618493721004,87.454686406973,42.1809730455907,44.2918648174978,0.101839363850316,0.124406970610093,1.76905930903572,4.41927897361595,0,0,0.900310649026746,1.9591626318643,4.96666443804693,4.48398020996974,2.81105173679186,10.6068382002996,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,60.7737951350328,52.0697338639179,0,0.264450566663544,0.213288250535234,0.464473343720877,0.515469845288373,1.4117846723634,1.33426826306922,0.760902504450237,0.474529061544512,0.823494773620054,2.26201687920243,0.994782360205754,1.75467678407208,2.69645822596266,0.648414149624083,0.796565093017469,0,0.571242563048644,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,30.1835109177049,41.4929370536399,0,0,0.315508219416257,1.95219372148319,4.30846795465598,0.477937595905104,0.445597348164788,0.566153061577665,1.21443210502468,3.21481443702443,2.37172666767914,49.8048040453801,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0.727067458955011,0,0.948110273807448,0,0,34.7248397868864,0,0.776152102696527,1.50035924522115,6.91626911204867,8.74007206250146,8.39200005070817,12.7875278628132,0,0,1.10264199027481,2.14352128823924,0,0.120625849856312,0.477489376012546,0.656563598980245,0.291480836629851,36.8996351000914,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0.540026704109006,1.25452977608681,1.52853794622324,1.75323650300267,1.65306911450672,1.83229159388821,1.03691978633434,0,338.779456149198,0.448549638131936,0.992750942742586,1.94451188344048,1.03327858782185,1.68956125490778,0.469428954583016,0.2604087696879,2.20204623293993,6.52277126230216,185.491324030065,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.167884616364078,1.54551675225752,0.187682475451182,0,0,0.501572104035363,49.1334103076848,34.9847179745454,47.5503276154699,52.4152206148247,36.309373547844,31.7265436903674,37.1262375127493,40.0785870869556,34.4388230827996,39.8675440048901,0.518936737920883,1.19707462020309,2.39027048055788,4.86213434136588,5.03071590307158,5.33146174505041,3.77819437262746,5.76898160268904,5.77654577265267,4.04315538822076,4.05566879824384,4.71565853465191,5.05664140337365,5.57018825922363,5.28406314391642,5.71552429539688,6.48952225291191,6.94473193669338,4.94503080963968,4.41596760403192,4.11443102862498,4.43689515398344,3.57654284920981,4.79643174886684,4.79957840118186,5.16149108139227,4.57319932181931,4.73525480588117,5.29636043998861,1.68342681497322,5.81311588808453,6.50129583678719,5.32000356120596,5.11291575913688,3.66522560864169,11.7410971630835,3.97683734357194,5.37177635120746,3.06061331310149,1.76473135295612,1.15933917810211 | |||
|short_description=p1@Chd5 | |||
}} |
Revision as of 06:18, 5 August 2015
Short description: | p1@Chd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chd5_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000030775, ENSMUST00000164662, NM_001081376, NM_029216, uc008wai.1, uc012dqc.1_5end |
EntrezGene: | 269610 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.71e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.71e-16 | 23 |
neuron | 4.73e-13 | 33 |
neuronal stem cell | 4.73e-13 | 33 |
neuroblast | 4.73e-13 | 33 |
electrically signaling cell | 4.73e-13 | 33 |
electrically responsive cell | 2.00e-09 | 39 |
electrically active cell | 2.00e-09 | 39 |
neural cell | 6.06e-09 | 43 |
ectodermal cell | 1.65e-08 | 44 |
neurectodermal cell | 1.65e-08 | 44 |