FFCP PHASE1:Mm9::chr6:134837801..134837884,-: Difference between revisions
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{{FFCP|EntrezGene=14760|HGNC=|MCL_coexpression_id=443|UniProt=Q61121|association_with_transcript=0bp_to_ENSMUST00000066107,ENSMUST00000171618,NM_001167697,NM_001167699,NM_008157,uc009ekv.2,uc009ekx.2,uc012eum.1_5end|description=CAGE_peak_2_at_Gpr19_5end|id=chr6:134837801..134837884,-|ontology_enrichment_celltype=CL:0000221!2.72e-23!44;CL:0000133!2.72e-23!44;CL:0002319!5.12e-23!43;CL:0000055!1.24e-18!50;CL:0000540!1.25e-17!33;CL:0000047!1.25e-17!33;CL:0000031!1.25e-17!33;CL:0000404!1.25e-17!33;CL:0000393!2.56e-14!39;CL:0000211!2.56e-14!39;CL:0000117!3.40e-14!23;CL:0000337!3.40e-14!23;CL:0002321!1.22e-07!70;CL:0000220!1.22e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,4.06e-30,44;CL:0000133,4.06e-30,44;CL:0002319,9.31e-30,43;CL:0000540,1.15e-22,33;CL:0000047,1.15e-22,33;CL:0000031,1.15e-22,33;CL:0000404,1.15e-22,33;CL:0000117,3.77e-18,23;CL:0000337,3.77e-18,23;CL:0000393,5.48e-18,39;CL:0000211,5.48e-18,39;CL:0002321,4.20e-13,70;CL:0000333,9.97e-08,10;CL:0000095,9.97e-08,10;CL:0000243,9.97e-08,10;CL:0000123,9.97e-08,10;CL:0000125,9.97e-08,10;CL:0000030,9.97e-08,10;CL:0000339,9.97e-08,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.39e-42!75;UBERON:0001016!2.39e-42!75;UBERON:0001017!7.12e-41!73;UBERON:0005743!7.12e-41!73;UBERON:0004121!2.97e-39!102;UBERON:0000924!2.97e-39!102;UBERON:0006601!2.97e-39!102;UBERON:0002346!8.72e-34!71;UBERON:0003075!8.72e-34!71;UBERON:0007284!8.72e-34!71;UBERON:0001049!1.24e-28!52;UBERON:0005068!1.24e-28!52;UBERON:0006241!1.24e-28!52;UBERON:0007135!1.24e-28!52;UBERON:0000033!1.30e-28!63;UBERON:0000955!3.13e-27!50;UBERON:0006238!3.13e-27!50;UBERON:0002616!2.08e-26!49;UBERON:0003056!1.53e-24!49;UBERON:0003080!9.85e-22!40;UBERON:0002020!2.30e-21!34;UBERON:0002780!2.93e-21!39;UBERON:0001890!2.93e-21!39;UBERON:0006240!2.93e-21!39;UBERON:0002791!3.17e-18!29;UBERON:0003528!3.17e-18!29;UBERON:0001893!3.17e-18!29;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0007811!4.63e-13!86;UBERON:0002619!2.40e-11!17;UBERON:0000153!9.44e-10!94;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0003076!2.51e-07!12;UBERON:0003057!2.51e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.17e-55,75;UBERON:0001017,2.79e-53,73;UBERON:0004121,9.06e-51,95;UBERON:0000924,9.06e-51,95;UBERON:0006601,9.06e-51,95;UBERON:0002346,3.82e-43,64;UBERON:0003075,3.82e-43,64;UBERON:0007284,3.82e-43,64;UBERON:0000073,1.02e-38,54;UBERON:0001049,3.74e-37,52;UBERON:0005068,3.74e-37,52;UBERON:0006241,3.74e-37,52;UBERON:0007135,3.74e-37,52;UBERON:0010371,3.90e-37,73;UBERON:0000955,4.42e-33,47;UBERON:0006238,4.42e-33,47;UBERON:0002616,5.17e-32,46;UBERON:0003056,9.16e-32,49;UBERON:0010314,2.25e-29,92;UBERON:0003080,4.57e-28,40;UBERON:0002020,1.39e-27,34;UBERON:0002780,1.92e-27,39;UBERON:0001890,1.92e-27,39;UBERON:0006240,1.92e-27,39;UBERON:0003528,1.89e-23,29;UBERON:0002791,1.89e-23,29;UBERON:0001893,1.89e-23,29;UBERON:0000956,2.77e-17,21;UBERON:0001869,2.77e-17,21;UBERON:0000203,2.77e-17,21;UBERON:0002619,2.09e-14,17;UBERON:0002021,3.36e-10,10;UBERON:0000411,3.36e-10,10;UBERON:0001950,3.36e-10,10;UBERON:0003076,3.88e-09,12;UBERON:0003057,3.88e-09,12;UBERON:0002420,2.81e-07,8;UBERON:0007245,2.81e-07,8;UBERON:0010009,2.81e-07,8;UBERON:0010011,2.81e-07,8;UBERON:0000454,2.81e-07,8;UBERON:0000010,6.03e-07,11;UBERON:0000025,6.60e-07,114|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.99703463710028,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,25.2909181401318,5.4921545683618,4.47188767870852,5.45947044338914,11.5002051491977,0,0,0,0.514518872071894,1.43266719969378,0,12.9482534950143,14.8117474196169,16.4796164911607,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0,15.579205746957,33.8112108682968,9.43575472007147,11.7455166348571,12.1988477583802,12.5686433137674,12.1477697523387,11.1466627285608,12.6516021744072,9.19218786610021,7.70811166995721,8.17198963745201,12.1349161272432,17.5408762681158,15.3699241252048,16.1483144872596,7.81712397203867,10.1297269805702,9.32069311438542,10.3120004915784,12.5287079103211,16.2167517868012,9.69295274664756,15.0387404612503,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,3.23939865486365,0,0,0,0.216491041011214,0,0,0.5709193985953,0,1.63286352971307,2.25530924795977,1.52232739156071,0.691846491768175,1.80867168663147,1.52865319276416,0.502666365318702,0.494389935468748,0.289198713839823,0.884610551949874,0,0,0,0,9.07620470735796,10.6817820474862,0,0,0,0,7.04016005202667,10.980014467647,15.0785222535437,11.6462294528825,10.4843337505436,6.44142938134636,7.94982189032012,0.203678727700633,0.124406970610093,0,1.47309299120532,4.03373373184381,6.20735681970377,5.22180176435513,3.61691562805716,4.69451844144162,4.74020765053944,4.77878795254617,3.10444044886819,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14760 | |||
|HGNC= | |||
|MCL_coexpression_id=443 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61121 | |||
|association_with_transcript=0bp_to_ENSMUST00000066107,ENSMUST00000171618,NM_001167697,NM_001167699,NM_008157,uc009ekv.2,uc009ekx.2,uc012eum.1_5end | |||
|cluster_id=chr6:134837801..134837884,- | |||
|description=CAGE_peak_2_at_Gpr19_5end | |||
|id=chr6:134837801..134837884,- | |||
|ontology_enrichment_celltype=CL:0000221!2.72e-23!44;CL:0000133!2.72e-23!44;CL:0002319!5.12e-23!43;CL:0000055!1.24e-18!50;CL:0000540!1.25e-17!33;CL:0000047!1.25e-17!33;CL:0000031!1.25e-17!33;CL:0000404!1.25e-17!33;CL:0000393!2.56e-14!39;CL:0000211!2.56e-14!39;CL:0000117!3.40e-14!23;CL:0000337!3.40e-14!23;CL:0002321!1.22e-07!70;CL:0000220!1.22e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.06e-30,44;CL:0000133,4.06e-30,44;CL:0002319,9.31e-30,43;CL:0000540,1.15e-22,33;CL:0000047,1.15e-22,33;CL:0000031,1.15e-22,33;CL:0000404,1.15e-22,33;CL:0000117,3.77e-18,23;CL:0000337,3.77e-18,23;CL:0000393,5.48e-18,39;CL:0000211,5.48e-18,39;CL:0002321,4.20e-13,70;CL:0000333,9.97e-08,10;CL:0000095,9.97e-08,10;CL:0000243,9.97e-08,10;CL:0000123,9.97e-08,10;CL:0000125,9.97e-08,10;CL:0000030,9.97e-08,10;CL:0000339,9.97e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.39e-42!75;UBERON:0001016!2.39e-42!75;UBERON:0001017!7.12e-41!73;UBERON:0005743!7.12e-41!73;UBERON:0004121!2.97e-39!102;UBERON:0000924!2.97e-39!102;UBERON:0006601!2.97e-39!102;UBERON:0002346!8.72e-34!71;UBERON:0003075!8.72e-34!71;UBERON:0007284!8.72e-34!71;UBERON:0001049!1.24e-28!52;UBERON:0005068!1.24e-28!52;UBERON:0006241!1.24e-28!52;UBERON:0007135!1.24e-28!52;UBERON:0000033!1.30e-28!63;UBERON:0000955!3.13e-27!50;UBERON:0006238!3.13e-27!50;UBERON:0002616!2.08e-26!49;UBERON:0003056!1.53e-24!49;UBERON:0003080!9.85e-22!40;UBERON:0002020!2.30e-21!34;UBERON:0002780!2.93e-21!39;UBERON:0001890!2.93e-21!39;UBERON:0006240!2.93e-21!39;UBERON:0002791!3.17e-18!29;UBERON:0003528!3.17e-18!29;UBERON:0001893!3.17e-18!29;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0007811!4.63e-13!86;UBERON:0002619!2.40e-11!17;UBERON:0000153!9.44e-10!94;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0003076!2.51e-07!12;UBERON:0003057!2.51e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.17e-55,75;UBERON:0001017,2.79e-53,73;UBERON:0004121,9.06e-51,95;UBERON:0000924,9.06e-51,95;UBERON:0006601,9.06e-51,95;UBERON:0002346,3.82e-43,64;UBERON:0003075,3.82e-43,64;UBERON:0007284,3.82e-43,64;UBERON:0000073,1.02e-38,54;UBERON:0001049,3.74e-37,52;UBERON:0005068,3.74e-37,52;UBERON:0006241,3.74e-37,52;UBERON:0007135,3.74e-37,52;UBERON:0010371,3.90e-37,73;UBERON:0000955,4.42e-33,47;UBERON:0006238,4.42e-33,47;UBERON:0002616,5.17e-32,46;UBERON:0003056,9.16e-32,49;UBERON:0010314,2.25e-29,92;UBERON:0003080,4.57e-28,40;UBERON:0002020,1.39e-27,34;UBERON:0002780,1.92e-27,39;UBERON:0001890,1.92e-27,39;UBERON:0006240,1.92e-27,39;UBERON:0003528,1.89e-23,29;UBERON:0002791,1.89e-23,29;UBERON:0001893,1.89e-23,29;UBERON:0000956,2.77e-17,21;UBERON:0001869,2.77e-17,21;UBERON:0000203,2.77e-17,21;UBERON:0002619,2.09e-14,17;UBERON:0002021,3.36e-10,10;UBERON:0000411,3.36e-10,10;UBERON:0001950,3.36e-10,10;UBERON:0003076,3.88e-09,12;UBERON:0003057,3.88e-09,12;UBERON:0002420,2.81e-07,8;UBERON:0007245,2.81e-07,8;UBERON:0010009,2.81e-07,8;UBERON:0010011,2.81e-07,8;UBERON:0000454,2.81e-07,8;UBERON:0000010,6.03e-07,11;UBERON:0000025,6.60e-07,114 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.99703463710028,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,25.2909181401318,5.4921545683618,4.47188767870852,5.45947044338914,11.5002051491977,0,0,0,0.514518872071894,1.43266719969378,0,12.9482534950143,14.8117474196169,16.4796164911607,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0,15.579205746957,33.8112108682968,9.43575472007147,11.7455166348571,12.1988477583802,12.5686433137674,12.1477697523387,11.1466627285608,12.6516021744072,9.19218786610021,7.70811166995721,8.17198963745201,12.1349161272432,17.5408762681158,15.3699241252048,16.1483144872596,7.81712397203867,10.1297269805702,9.32069311438542,10.3120004915784,12.5287079103211,16.2167517868012,9.69295274664756,15.0387404612503,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,3.23939865486365,0,0,0,0.216491041011214,0,0,0.5709193985953,0,1.63286352971307,2.25530924795977,1.52232739156071,0.691846491768175,1.80867168663147,1.52865319276416,0.502666365318702,0.494389935468748,0.289198713839823,0.884610551949874,0,0,0,0,9.07620470735796,10.6817820474862,0,0,0,0,7.04016005202667,10.980014467647,15.0785222535437,11.6462294528825,10.4843337505436,6.44142938134636,7.94982189032012,0.203678727700633,0.124406970610093,0,1.47309299120532,4.03373373184381,6.20735681970377,5.22180176435513,3.61691562805716,4.69451844144162,4.74020765053944,4.77878795254617,3.10444044886819,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0,11.9865270681553,10.7020796874456,0,0,1.70630600428187,0.928946687441754,0.77320476793256,0.80673409849337,0.667134131534611,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0.758671603812327,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.252946148497029,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0,0.234690248288502,0.335012514883631,0.476087281772027,0,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0,6.58257418949947,5.39173758324135,0,0.757412781613119,6.31016438832513,6.24701990874622,6.24727853425117,6.4521575447189,5.34716817797746,6.51076020814315,3.23848561339915,3.79932615284705,6.7198922250909,25.0630626809009,0.141940085208269,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,10.2131881726136,1.8006109403131,3.62204314591713,1.50035924522115,3.19212420556092,3.74574516964348,3.9491764944509,6.69822888052118,0.23467170806371,1.0591603543191,0.220528398054962,0,0,0.120625849856312,0.358117032009409,0,0,8.52956389248344,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,1.01659733563424,0.216010681643603,0.418176592028937,0.655087691238533,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.352071715937262,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,1.99787358036658,3.05027112472217,0.671538465456314,0,0.187682475451182,0.549454872801795,0.214368379079066,0,19.7663144915973,18.8733346967943,23.4887160510153,16.1541991403066,17.1270629942661,9.06472676867641,18.2256075062588,20.7147753483141,24.0165476761628,17.6038505995619,1.66059756134683,5.58634822761443,3.75613932659095,1.21553358534147,1.46729213839588,1.2869045591501,1.77797382241292,1.03017528619447,1.92551525755089,2.27427490587418,3.29523089857312,2.26351609663291,1.40462261204824,2.17685518176556,1.89537047553524,5.23923060411381,1.73826488917283,0.964546102318525,2.47251540481984,2.35518272215036,1.71434626192708,1.95223386775271,1.90748951957857,2.47088908274958,1.50575008664529,1.52306294205018,0.914639864363863,0.789209134313529,2.17286582153379,4.48913817326191,1.30498519936592,1.97008964751127,1.22769312950907,0.929621047115796,0.771626443924566,5.24602213669686,1.87145286756327,1.50409737833809,0.57386499620653,0.661774257358546,0.927471342481686 | |||
|short_description=p2@Gpr19 | |||
}} |
Revision as of 07:24, 5 August 2015
Short description: | p2@Gpr19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpr19_5end |
Coexpression cluster: | MCL_coexpression_mm9:443 |
Association with transcript: | 0bp_to_ENSMUST00000066107, ENSMUST00000171618, NM_001167697, NM_001167699, NM_008157, uc009ekv.2, uc009ekx.2, uc012eum.1_5end |
EntrezGene: | 14760 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.06e-30 | 44 |
neurectodermal cell | 4.06e-30 | 44 |
neural cell | 9.31e-30 | 43 |
neuron | 1.15e-22 | 33 |
neuronal stem cell | 1.15e-22 | 33 |
neuroblast | 1.15e-22 | 33 |
electrically signaling cell | 1.15e-22 | 33 |
CNS neuron (sensu Vertebrata) | 3.77e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.77e-18 | 23 |
electrically responsive cell | 5.48e-18 | 39 |
electrically active cell | 5.48e-18 | 39 |
embryonic cell | 4.20e-13 | 70 |
migratory neural crest cell | 9.97e-08 | 10 |
neuron associated cell | 9.97e-08 | 10 |
glial cell (sensu Vertebrata) | 9.97e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.97e-08 | 10 |
glial cell | 9.97e-08 | 10 |
glioblast | 9.97e-08 | 10 |
glioblast (sensu Vertebrata) | 9.97e-08 | 10 |