FFCP PHASE1:Mm9::chr4:155396384..155396395,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:155396384..155396395,-|id=chr4:155396384..155396395,-|ontology_enrichment_celltype=CL:0000791!3.40e-43!9;CL:0000789!3.40e-43!9;CL:0002420!3.40e-43!9;CL:0002419!3.40e-43!9;CL:0000790!3.40e-43!9;CL:0000084!5.05e-43!11;CL:0000827!5.05e-43!11;CL:0000838!2.50e-39!12;CL:0000624!2.48e-38!8;CL:0000542!3.36e-36!13;CL:0000051!3.36e-36!13;CL:0000893!6.59e-29!6;CL:0002489!6.59e-29!6;CL:0000898!6.59e-29!6;CL:0000809!6.59e-29!6;CL:0000810!6.59e-29!6;CL:0000895!6.59e-29!6;CL:0000808!6.59e-29!6;CL:0000894!6.59e-29!6;CL:0000806!6.59e-29!6;CL:0000807!6.59e-29!6;CL:0000805!6.59e-29!6;CL:0002425!6.59e-29!6;CL:0002436!6.59e-29!6;CL:0002427!6.59e-29!6;CL:0002428!6.59e-29!6;CL:0002429!6.59e-29!6;CL:0002433!6.59e-29!6;CL:0002431!6.59e-29!6;CL:0002432!6.59e-29!6;CL:0000738!2.32e-27!17;CL:0002087!2.32e-27!17;CL:0002031!5.96e-22!25;CL:0000988!8.68e-17!32;CL:0002032!8.68e-17!32;CL:0000037!8.68e-17!32;CL:0000566!8.68e-17!32;CL:0000837!8.68e-17!32;CL:0002320!3.67e-11!46;CL:0000134!3.67e-11!46;CL:0000219!4.94e-11!54;CL:0000063!1.02e-08!66|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,4.37e-66,8;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000893,5.21e-45,6;CL:0002489,5.21e-45,6;CL:0000898,5.21e-45,6;CL:0000809,5.21e-45,6;CL:0000810,5.21e-45,6;CL:0000895,5.21e-45,6;CL:0000808,5.21e-45,6;CL:0000894,5.21e-45,6;CL:0000806,5.21e-45,6;CL:0000807,5.21e-45,6;CL:0000805,5.21e-45,6;CL:0002425,5.21e-45,6;CL:0002436,5.21e-45,6;CL:0002427,5.21e-45,6;CL:0002428,5.21e-45,6;CL:0002429,5.21e-45,6;CL:0002433,5.21e-45,6;CL:0002431,5.21e-45,6;CL:0002432,5.21e-45,6;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000625,1.20e-12,1;CL:0000815,3.34e-12,1;CL:0000792,3.34e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.56e-15!23;UBERON:0000974!1.56e-15!23;UBERON:0004807!1.56e-15!23;UBERON:0005058!1.56e-15!23;UBERON:0003351!1.56e-15!23;UBERON:0009113!1.56e-15!23;UBERON:0003295!1.56e-15!23;UBERON:0009722!1.56e-15!23;UBERON:0005562!1.56e-15!23;UBERON:0007690!1.56e-15!23;UBERON:0004177!7.62e-15!29;UBERON:0006562!7.79e-15!24;UBERON:0003408!7.79e-15!24;UBERON:0001557!7.79e-15!24;UBERON:0001042!7.79e-15!24;UBERON:0008814!7.79e-15!24;UBERON:0009145!7.79e-15!24;UBERON:0000072!4.74e-13!27;UBERON:0000063!4.21e-12!35;UBERON:0002384!3.67e-11!46;UBERON:0002390!4.96e-11!45;UBERON:0003061!4.96e-11!45;UBERON:0002193!3.09e-10!48;UBERON:0005057!1.77e-09!51;UBERON:0000065!3.63e-08!41;UBERON:0001004!6.08e-08!42;UBERON:0002405!8.55e-08!70;UBERON:0003929!4.02e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,5.20e-12,23;UBERON:0000974,5.20e-12,23;UBERON:0004807,5.20e-12,23;UBERON:0005058,5.20e-12,23;UBERON:0003351,5.20e-12,23;UBERON:0009113,5.20e-12,23;UBERON:0003295,5.20e-12,23;UBERON:0009722,5.20e-12,23;UBERON:0005562,5.20e-12,23;UBERON:0007690,5.20e-12,23;UBERON:0006562,1.61e-11,24;UBERON:0003408,1.61e-11,24;UBERON:0001557,1.61e-11,24;UBERON:0001042,1.61e-11,24;UBERON:0008814,1.61e-11,24;UBERON:0009145,1.61e-11,24;UBERON:0000072,2.90e-10,27;UBERON:0004177,1.43e-09,29;UBERON:0005057,1.43e-09,29;UBERON:0000077,5.85e-08,35;UBERON:0007811,9.65e-08,36;UBERON:0000065,8.19e-07,41|phase1_expression=0,0,0,0,0,0,0,6.19791952519566,5.34997144176334,8.66038747391376,3.08192342805909,0.957265907944037,7.36163138704185,5.07038334030185,0,0,0,0,0.411343300817216,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0565185562042,16.1325023588383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:155396384..155396395,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:155396384..155396395,- | |||
|description=CAGE_peak_at_chr4:155396384..155396395,- | |||
|id=chr4:155396384..155396395,- | |||
|ontology_enrichment_celltype=CL:0000791!3.40e-43!9;CL:0000789!3.40e-43!9;CL:0002420!3.40e-43!9;CL:0002419!3.40e-43!9;CL:0000790!3.40e-43!9;CL:0000084!5.05e-43!11;CL:0000827!5.05e-43!11;CL:0000838!2.50e-39!12;CL:0000624!2.48e-38!8;CL:0000542!3.36e-36!13;CL:0000051!3.36e-36!13;CL:0000893!6.59e-29!6;CL:0002489!6.59e-29!6;CL:0000898!6.59e-29!6;CL:0000809!6.59e-29!6;CL:0000810!6.59e-29!6;CL:0000895!6.59e-29!6;CL:0000808!6.59e-29!6;CL:0000894!6.59e-29!6;CL:0000806!6.59e-29!6;CL:0000807!6.59e-29!6;CL:0000805!6.59e-29!6;CL:0002425!6.59e-29!6;CL:0002436!6.59e-29!6;CL:0002427!6.59e-29!6;CL:0002428!6.59e-29!6;CL:0002429!6.59e-29!6;CL:0002433!6.59e-29!6;CL:0002431!6.59e-29!6;CL:0002432!6.59e-29!6;CL:0000738!2.32e-27!17;CL:0002087!2.32e-27!17;CL:0002031!5.96e-22!25;CL:0000988!8.68e-17!32;CL:0002032!8.68e-17!32;CL:0000037!8.68e-17!32;CL:0000566!8.68e-17!32;CL:0000837!8.68e-17!32;CL:0002320!3.67e-11!46;CL:0000134!3.67e-11!46;CL:0000219!4.94e-11!54;CL:0000063!1.02e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,4.37e-66,8;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000893,5.21e-45,6;CL:0002489,5.21e-45,6;CL:0000898,5.21e-45,6;CL:0000809,5.21e-45,6;CL:0000810,5.21e-45,6;CL:0000895,5.21e-45,6;CL:0000808,5.21e-45,6;CL:0000894,5.21e-45,6;CL:0000806,5.21e-45,6;CL:0000807,5.21e-45,6;CL:0000805,5.21e-45,6;CL:0002425,5.21e-45,6;CL:0002436,5.21e-45,6;CL:0002427,5.21e-45,6;CL:0002428,5.21e-45,6;CL:0002429,5.21e-45,6;CL:0002433,5.21e-45,6;CL:0002431,5.21e-45,6;CL:0002432,5.21e-45,6;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000625,1.20e-12,1;CL:0000815,3.34e-12,1;CL:0000792,3.34e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.56e-15!23;UBERON:0000974!1.56e-15!23;UBERON:0004807!1.56e-15!23;UBERON:0005058!1.56e-15!23;UBERON:0003351!1.56e-15!23;UBERON:0009113!1.56e-15!23;UBERON:0003295!1.56e-15!23;UBERON:0009722!1.56e-15!23;UBERON:0005562!1.56e-15!23;UBERON:0007690!1.56e-15!23;UBERON:0004177!7.62e-15!29;UBERON:0006562!7.79e-15!24;UBERON:0003408!7.79e-15!24;UBERON:0001557!7.79e-15!24;UBERON:0001042!7.79e-15!24;UBERON:0008814!7.79e-15!24;UBERON:0009145!7.79e-15!24;UBERON:0000072!4.74e-13!27;UBERON:0000063!4.21e-12!35;UBERON:0002384!3.67e-11!46;UBERON:0002390!4.96e-11!45;UBERON:0003061!4.96e-11!45;UBERON:0002193!3.09e-10!48;UBERON:0005057!1.77e-09!51;UBERON:0000065!3.63e-08!41;UBERON:0001004!6.08e-08!42;UBERON:0002405!8.55e-08!70;UBERON:0003929!4.02e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,5.20e-12,23;UBERON:0000974,5.20e-12,23;UBERON:0004807,5.20e-12,23;UBERON:0005058,5.20e-12,23;UBERON:0003351,5.20e-12,23;UBERON:0009113,5.20e-12,23;UBERON:0003295,5.20e-12,23;UBERON:0009722,5.20e-12,23;UBERON:0005562,5.20e-12,23;UBERON:0007690,5.20e-12,23;UBERON:0006562,1.61e-11,24;UBERON:0003408,1.61e-11,24;UBERON:0001557,1.61e-11,24;UBERON:0001042,1.61e-11,24;UBERON:0008814,1.61e-11,24;UBERON:0009145,1.61e-11,24;UBERON:0000072,2.90e-10,27;UBERON:0004177,1.43e-09,29;UBERON:0005057,1.43e-09,29;UBERON:0000077,5.85e-08,35;UBERON:0007811,9.65e-08,36;UBERON:0000065,8.19e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,6.19791952519566,5.34997144176334,8.66038747391376,3.08192342805909,0.957265907944037,7.36163138704185,5.07038334030185,0,0,0,0,0.411343300817216,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0565185562042,16.1325023588383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:155396384..155396395,- | |||
}} | |||
Latest revision as of 07:48, 5 August 2015
| Short description: | p@chr4:155396384..155396395, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr4:155396384..155396395, - |
| Coexpression cluster: | MCL_coexpression_mm9:21 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 3.33e-15 | 46 |
| thymus | 5.20e-12 | 23 |
| neck | 5.20e-12 | 23 |
| respiratory system epithelium | 5.20e-12 | 23 |
| hemolymphoid system gland | 5.20e-12 | 23 |
| pharyngeal epithelium | 5.20e-12 | 23 |
| thymic region | 5.20e-12 | 23 |
| pharyngeal gland | 5.20e-12 | 23 |
| entire pharyngeal arch endoderm | 5.20e-12 | 23 |
| thymus primordium | 5.20e-12 | 23 |
| early pharyngeal endoderm | 5.20e-12 | 23 |
| pharynx | 1.61e-11 | 24 |
| gland of gut | 1.61e-11 | 24 |
| upper respiratory tract | 1.61e-11 | 24 |
| chordate pharynx | 1.61e-11 | 24 |
| pharyngeal arch system | 1.61e-11 | 24 |
| pharyngeal region of foregut | 1.61e-11 | 24 |
| segment of respiratory tract | 2.90e-10 | 27 |
| hemopoietic organ | 1.43e-09 | 29 |
| immune organ | 1.43e-09 | 29 |
| mixed endoderm/mesoderm-derived structure | 5.85e-08 | 35 |
| craniocervical region | 9.65e-08 | 36 |
| respiratory tract | 8.19e-07 | 41 |