FFCP PHASE1:Mm9::chr17:74154194..74154211,+: Difference between revisions
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{{FFCP|EntrezGene=57440|HGNC=|UniProt=Q9QXY6|association_with_transcript=13bp_to_ENSMUST00000024860,NM_020578,uc008dnn.2_5end|description=CAGE_peak_3_at_Ehd3_5end|id=chr17:74154194..74154211,+|ontology_enrichment_celltype=CL:0000055!9.56e-11!50;CL:0000221!4.41e-10!44;CL:0000133!4.41e-10!44;CL:0002319!6.11e-10!43;CL:0000117!8.11e-08!23;CL:0000337!8.11e-08!23;CL:0000393!7.57e-07!39;CL:0000211!7.57e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0002319,1.94e-12,43;CL:0000117,5.13e-09,23;CL:0000337,5.13e-09,23;CL:0000393,9.95e-09,39;CL:0000211,9.95e-09,39;CL:0000540,4.02e-08,33;CL:0000047,4.02e-08,33;CL:0000031,4.02e-08,33;CL:0000404,4.02e-08,33;CL:0002321,1.58e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.75e-21!75;UBERON:0001016!7.75e-21!75;UBERON:0001017!1.30e-20!73;UBERON:0005743!1.30e-20!73;UBERON:0004121!1.97e-19!102;UBERON:0000924!1.97e-19!102;UBERON:0006601!1.97e-19!102;UBERON:0001049!2.71e-16!52;UBERON:0005068!2.71e-16!52;UBERON:0006241!2.71e-16!52;UBERON:0007135!2.71e-16!52;UBERON:0000955!2.03e-15!50;UBERON:0006238!2.03e-15!50;UBERON:0002346!2.42e-15!71;UBERON:0003075!2.42e-15!71;UBERON:0007284!2.42e-15!71;UBERON:0002616!9.19e-15!49;UBERON:0000033!5.42e-13!63;UBERON:0002020!2.35e-12!34;UBERON:0000025!4.77e-12!114;UBERON:0004111!2.38e-11!122;UBERON:0003080!2.22e-10!40;UBERON:0002791!7.40e-10!29;UBERON:0003528!7.40e-10!29;UBERON:0001893!7.40e-10!29;UBERON:0002780!7.50e-10!39;UBERON:0001890!7.50e-10!39;UBERON:0006240!7.50e-10!39;UBERON:0000475!1.78e-09!200;UBERON:0003056!5.76e-09!49;UBERON:0000477!5.97e-09!154;UBERON:0007811!1.07e-08!86;UBERON:0000153!8.58e-08!94;UBERON:0003076!3.08e-07!12;UBERON:0003057!3.08e-07!12;UBERON:0000956!8.30e-07!21;UBERON:0001869!8.30e-07!21;UBERON:0000203!8.30e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-25,73;UBERON:0001016,1.08e-25,75;UBERON:0000073,1.96e-20,54;UBERON:0004121,4.22e-20,95;UBERON:0000924,4.22e-20,95;UBERON:0006601,4.22e-20,95;UBERON:0001049,5.98e-19,52;UBERON:0005068,5.98e-19,52;UBERON:0006241,5.98e-19,52;UBERON:0007135,5.98e-19,52;UBERON:0000955,1.50e-15,47;UBERON:0006238,1.50e-15,47;UBERON:0002346,7.13e-15,64;UBERON:0003075,7.13e-15,64;UBERON:0007284,7.13e-15,64;UBERON:0002616,1.02e-14,46;UBERON:0002020,1.29e-14,34;UBERON:0000025,2.91e-13,114;UBERON:0010371,1.23e-12,73;UBERON:0004111,2.57e-12,122;UBERON:0003528,3.01e-11,29;UBERON:0002791,3.01e-11,29;UBERON:0001893,3.01e-11,29;UBERON:0003080,3.89e-11,40;UBERON:0010314,9.60e-11,92;UBERON:0002780,1.87e-10,39;UBERON:0001890,1.87e-10,39;UBERON:0006240,1.87e-10,39;UBERON:0003076,1.60e-09,12;UBERON:0003057,1.60e-09,12;UBERON:0003056,8.52e-08,49;UBERON:0002619,2.02e-07,17;UBERON:0000956,3.74e-07,21;UBERON:0001869,3.74e-07,21;UBERON:0000203,3.74e-07,21;UBERON:0011216,9.75e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,0.985521055061667,0.70219357896598,0.34243593645101,0,2.56801094896809,2.27293046289393,0.666219523631325,0.202475267389826,0,2.36596624018678,1.09691546884591,0.84877930359606,1.9559956734746,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.202753862439029,0.183546752161682,1.56478268869608,1.30815093828268,7.90870257844099,2.72201858703997,2.51975558925653,4.31257693094915,0.503347818173209,2.17608642603403,3.02484419228218,1.02903774414379,3.43840127926508,6.18806510732931,1.21389876515759,2.64495489636016,2.53532561402472,2.71075625655306,4.4464739805557,0.449949858640699,0,0.7104801149461,2.69640099466564,3.84218305321555,0.933206510776299,0.675029691658453,1.89292465216244,5.14171771926846,5.52171352379034,0.857435594504678,1.24599112323707,0,5.50579404996943,3.19218345212969,4.14737639791857,3.03338461779446,1.82975287204819,1.56274011167028,5.862842979029,1.12552522006336,7.79271063661732,3.53554302568401,3.13217697758026,1.86399445825301,0.530083353332288,2.26714680320357,6.66688324013859,8.60423876981386,0,0,0.649776417447669,0,1.26399978118577,1.53387290320252,1.29893002301434,0.70667914902068,1.12674735821344,2.56652954828636,0,0,0,0,0,0.91347103775248,2.07150306917737,1.33597925158342,1.04091196059682,0.913396434936424,1.15307748628029,0.60289056221049,1.29347577849275,1.50799909595611,2.22475470960936,1.87979163995885,0.884610551949874,0.970601099684455,0.883366073841574,0,0,3.80615036115011,5.86450779077674,0.510914110417183,0.11981512450592,0,0,4.94309110035915,2.74500361691176,1.50785222535437,2.78118912307642,2.04572365864264,6.2336413367868,2.92034273521964,0.509196819251581,1.61729061793121,4.29628689337247,0.420883711772948,0.780722657776222,0.689706313300419,0,0.753524089178575,0.476255494059295,0.640568601424249,0.937017245597288,1.03481348295606,1.5089759505299,0.189106080167819,0.175951124163949,0.43839146485515,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0,0.930135779001631,0.2682734013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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57440 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QXY6 | |||
|association_with_transcript=13bp_to_ENSMUST00000024860,NM_020578,uc008dnn.2_5end | |||
|cluster_id=chr17:74154194..74154211,+ | |||
|description=CAGE_peak_3_at_Ehd3_5end | |||
|id=chr17:74154194..74154211,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.56e-11!50;CL:0000221!4.41e-10!44;CL:0000133!4.41e-10!44;CL:0002319!6.11e-10!43;CL:0000117!8.11e-08!23;CL:0000337!8.11e-08!23;CL:0000393!7.57e-07!39;CL:0000211!7.57e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0002319,1.94e-12,43;CL:0000117,5.13e-09,23;CL:0000337,5.13e-09,23;CL:0000393,9.95e-09,39;CL:0000211,9.95e-09,39;CL:0000540,4.02e-08,33;CL:0000047,4.02e-08,33;CL:0000031,4.02e-08,33;CL:0000404,4.02e-08,33;CL:0002321,1.58e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.75e-21!75;UBERON:0001016!7.75e-21!75;UBERON:0001017!1.30e-20!73;UBERON:0005743!1.30e-20!73;UBERON:0004121!1.97e-19!102;UBERON:0000924!1.97e-19!102;UBERON:0006601!1.97e-19!102;UBERON:0001049!2.71e-16!52;UBERON:0005068!2.71e-16!52;UBERON:0006241!2.71e-16!52;UBERON:0007135!2.71e-16!52;UBERON:0000955!2.03e-15!50;UBERON:0006238!2.03e-15!50;UBERON:0002346!2.42e-15!71;UBERON:0003075!2.42e-15!71;UBERON:0007284!2.42e-15!71;UBERON:0002616!9.19e-15!49;UBERON:0000033!5.42e-13!63;UBERON:0002020!2.35e-12!34;UBERON:0000025!4.77e-12!114;UBERON:0004111!2.38e-11!122;UBERON:0003080!2.22e-10!40;UBERON:0002791!7.40e-10!29;UBERON:0003528!7.40e-10!29;UBERON:0001893!7.40e-10!29;UBERON:0002780!7.50e-10!39;UBERON:0001890!7.50e-10!39;UBERON:0006240!7.50e-10!39;UBERON:0000475!1.78e-09!200;UBERON:0003056!5.76e-09!49;UBERON:0000477!5.97e-09!154;UBERON:0007811!1.07e-08!86;UBERON:0000153!8.58e-08!94;UBERON:0003076!3.08e-07!12;UBERON:0003057!3.08e-07!12;UBERON:0000956!8.30e-07!21;UBERON:0001869!8.30e-07!21;UBERON:0000203!8.30e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-25,73;UBERON:0001016,1.08e-25,75;UBERON:0000073,1.96e-20,54;UBERON:0004121,4.22e-20,95;UBERON:0000924,4.22e-20,95;UBERON:0006601,4.22e-20,95;UBERON:0001049,5.98e-19,52;UBERON:0005068,5.98e-19,52;UBERON:0006241,5.98e-19,52;UBERON:0007135,5.98e-19,52;UBERON:0000955,1.50e-15,47;UBERON:0006238,1.50e-15,47;UBERON:0002346,7.13e-15,64;UBERON:0003075,7.13e-15,64;UBERON:0007284,7.13e-15,64;UBERON:0002616,1.02e-14,46;UBERON:0002020,1.29e-14,34;UBERON:0000025,2.91e-13,114;UBERON:0010371,1.23e-12,73;UBERON:0004111,2.57e-12,122;UBERON:0003528,3.01e-11,29;UBERON:0002791,3.01e-11,29;UBERON:0001893,3.01e-11,29;UBERON:0003080,3.89e-11,40;UBERON:0010314,9.60e-11,92;UBERON:0002780,1.87e-10,39;UBERON:0001890,1.87e-10,39;UBERON:0006240,1.87e-10,39;UBERON:0003076,1.60e-09,12;UBERON:0003057,1.60e-09,12;UBERON:0003056,8.52e-08,49;UBERON:0002619,2.02e-07,17;UBERON:0000956,3.74e-07,21;UBERON:0001869,3.74e-07,21;UBERON:0000203,3.74e-07,21;UBERON:0011216,9.75e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.42035655785734,0.985521055061667,0.70219357896598,0.34243593645101,0,2.56801094896809,2.27293046289393,0.666219523631325,0.202475267389826,0,2.36596624018678,1.09691546884591,0.84877930359606,1.9559956734746,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.202753862439029,0.183546752161682,1.56478268869608,1.30815093828268,7.90870257844099,2.72201858703997,2.51975558925653,4.31257693094915,0.503347818173209,2.17608642603403,3.02484419228218,1.02903774414379,3.43840127926508,6.18806510732931,1.21389876515759,2.64495489636016,2.53532561402472,2.71075625655306,4.4464739805557,0.449949858640699,0,0.7104801149461,2.69640099466564,3.84218305321555,0.933206510776299,0.675029691658453,1.89292465216244,5.14171771926846,5.52171352379034,0.857435594504678,1.24599112323707,0,5.50579404996943,3.19218345212969,4.14737639791857,3.03338461779446,1.82975287204819,1.56274011167028,5.862842979029,1.12552522006336,7.79271063661732,3.53554302568401,3.13217697758026,1.86399445825301,0.530083353332288,2.26714680320357,6.66688324013859,8.60423876981386,0,0,0.649776417447669,0,1.26399978118577,1.53387290320252,1.29893002301434,0.70667914902068,1.12674735821344,2.56652954828636,0,0,0,0,0,0.91347103775248,2.07150306917737,1.33597925158342,1.04091196059682,0.913396434936424,1.15307748628029,0.60289056221049,1.29347577849275,1.50799909595611,2.22475470960936,1.87979163995885,0.884610551949874,0.970601099684455,0.883366073841574,0,0,3.80615036115011,5.86450779077674,0.510914110417183,0.11981512450592,0,0,4.94309110035915,2.74500361691176,1.50785222535437,2.78118912307642,2.04572365864264,6.2336413367868,2.92034273521964,0.509196819251581,1.61729061793121,4.29628689337247,0.420883711772948,0.780722657776222,0.689706313300419,0,0.753524089178575,0.476255494059295,0.640568601424249,0.937017245597288,1.03481348295606,1.5089759505299,0.189106080167819,0.175951124163949,0.43839146485515,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0,0.930135779001631,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0,0.219550115291051,0.268412837520744,7.78072809687271,2.26390147234426,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0.667134131534611,0.951128130562796,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.58489226135736,0,0,0.597423819763102,0.569003702859245,0.685491075658373,1.1270773567308,0.814605311381257,0.969762435838129,1.40271639780637,1.13825766823663,1.91893192373483,1.09899109488962,1.48076596706161,0,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.72353147925725,0,1.43848068725405,1.78348749452539,0,5.75072826109418,1.11642284300551,0,1.51547326768267,0.358794827043824,0.964887042726734,2.03228509183265,0.37898282354097,0.977789858652155,0.169745085775188,0.704070744865506,1.84256883185997,0.952174563544055,1.36593553500459,2.04925687338048,1.32878813789265,1.59454768657487,1.63863314715738,0.863424909329478,1.15719246865209,0,0,2.95058563811422,0.275936746304732,6.10092241953609,3.98519734413491,0,0.757412781613119,1.26203287766503,0,2.58508077279359,0,0.668396022247182,1.41538265394416,0.404810701674894,1.16902343164525,3.16230222357219,7.71171159412337,0.283880170416537,0.35613120733451,0.325773918707152,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,1.36175842301515,0.900305470156551,0.129358683782755,0.643011105094777,0.532020700926821,1.07021290561242,1.48094118541909,0.304464949114599,5.39744928546534,1.0591603543191,0.661585194164886,0.8244312647074,0,0.180938774784468,0.596861720015682,0.492422699235184,0.291480836629851,5.56275906031529,1.36696704638282,0.619160603889667,0.740778109478847,1.13021074202815,0.683471138605126,0.457556346413045,0,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.809186078308924,0.661227645802687,0.26175594198403,0.388844919875379,3.72803587852155,0,0,0.330916980914195,0.388902376688095,0.129159823477731,0.506868376472335,0.469428954583016,0.911430693907651,0.419437377702843,0.483168241652012,0,0.316011120628178,0,0.308132871494482,0.51968329191118,0,0.198681354781265,0.480781798079875,0.295379054349154,0.403865799792591,0.228620419965,0.604957110821043,0.38983152295901,0.865906574762965,1.16876902181569,0,0,0.358855426437903,0.167884616364078,0.965947970160952,2.25218970541418,0.183151624267265,0,0.501572104035363,1.6942555278512,1.38097570952153,5.15605962095457,6.35856774671644,4.11049511862385,0.755393897389701,1.35004500046361,3.60256962579376,3.17199686288943,4.14208249401456,0.93408612825759,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.735374033800057,0.666740183404846,0,0,0.252697211763798,0.760437899670719,0.188626341386076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| |||
|short_description=p3@Ehd3 | |||
}} |
Revision as of 07:54, 5 August 2015
Short description: | p3@Ehd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ehd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000024860, NM_020578, uc008dnn.2_5end |
EntrezGene: | 57440 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.22e-12 | 44 |
neurectodermal cell | 1.22e-12 | 44 |
neural cell | 1.94e-12 | 43 |
CNS neuron (sensu Vertebrata) | 5.13e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.13e-09 | 23 |
electrically responsive cell | 9.95e-09 | 39 |
electrically active cell | 9.95e-09 | 39 |
neuron | 4.02e-08 | 33 |
neuronal stem cell | 4.02e-08 | 33 |
neuroblast | 4.02e-08 | 33 |
electrically signaling cell | 4.02e-08 | 33 |
embryonic cell | 1.58e-07 | 70 |