FFCP PHASE1:Mm9::chr12:82732033..82732108,+: Difference between revisions
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{{FFCP|EntrezGene=69480|HGNC=|MCL_coexpression_id=13|UniProt=Q3V038|association_with_transcript=-247bp_to_ENSMUST00000036116,NM_001033149,uc007ocm.1,uc007ocn.1_5end|description=CAGE_peak_2_at_Ttc9_5end|id=chr12:82732033..82732108,+|ontology_enrichment_celltype=CL:0000117!4.51e-14!23;CL:0000337!4.51e-14!23;CL:0000221!3.58e-11!44;CL:0000133!3.58e-11!44;CL:0002319!9.47e-11!43;CL:0000540!5.39e-09!33;CL:0000047!5.39e-09!33;CL:0000031!5.39e-09!33;CL:0000404!5.39e-09!33;CL:0000055!5.71e-09!50;CL:0000393!9.06e-08!39;CL:0000211!9.06e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-18,23;CL:0000337,3.57e-18,23;CL:0000221,2.25e-13,44;CL:0000133,2.25e-13,44;CL:0002319,7.96e-13,43;CL:0000540,1.79e-10,33;CL:0000047,1.79e-10,33;CL:0000031,1.79e-10,33;CL:0000404,1.79e-10,33;CL:0000393,1.71e-07,39;CL:0000211,1.71e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.95e-24!75;UBERON:0001016!8.95e-24!75;UBERON:0001017!1.59e-22!73;UBERON:0005743!1.59e-22!73;UBERON:0000033!4.47e-21!63;UBERON:0004121!1.17e-20!102;UBERON:0000924!1.17e-20!102;UBERON:0006601!1.17e-20!102;UBERON:0001049!1.44e-20!52;UBERON:0005068!1.44e-20!52;UBERON:0006241!1.44e-20!52;UBERON:0007135!1.44e-20!52;UBERON:0000955!6.19e-19!50;UBERON:0006238!6.19e-19!50;UBERON:0002616!2.61e-18!49;UBERON:0002346!9.56e-18!71;UBERON:0003075!9.56e-18!71;UBERON:0007284!9.56e-18!71;UBERON:0002020!7.84e-17!34;UBERON:0003056!1.04e-16!49;UBERON:0003080!8.15e-15!40;UBERON:0002780!2.75e-14!39;UBERON:0001890!2.75e-14!39;UBERON:0006240!2.75e-14!39;UBERON:0002791!1.60e-13!29;UBERON:0003528!1.60e-13!29;UBERON:0001893!1.60e-13!29;UBERON:0000956!2.30e-09!21;UBERON:0001869!2.30e-09!21;UBERON:0000203!2.30e-09!21;UBERON:0000025!1.44e-08!114;UBERON:0004111!1.48e-08!122;UBERON:0007811!3.93e-08!86;UBERON:0002619!1.64e-07!17;UBERON:0000153!4.46e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-28,75;UBERON:0001017,2.73e-26,73;UBERON:0000073,3.93e-26,54;UBERON:0004121,2.97e-25,95;UBERON:0000924,2.97e-25,95;UBERON:0006601,2.97e-25,95;UBERON:0001049,1.27e-24,52;UBERON:0005068,1.27e-24,52;UBERON:0006241,1.27e-24,52;UBERON:0007135,1.27e-24,52;UBERON:0002346,2.01e-23,64;UBERON:0003075,2.01e-23,64;UBERON:0007284,2.01e-23,64;UBERON:0002020,2.33e-21,34;UBERON:0000955,3.91e-20,47;UBERON:0006238,3.91e-20,47;UBERON:0010371,6.56e-20,73;UBERON:0002616,2.40e-19,46;UBERON:0003056,1.14e-17,49;UBERON:0003528,5.55e-17,29;UBERON:0002791,5.55e-17,29;UBERON:0001893,5.55e-17,29;UBERON:0003080,1.03e-16,40;UBERON:0002780,4.88e-16,39;UBERON:0001890,4.88e-16,39;UBERON:0006240,4.88e-16,39;UBERON:0010314,7.24e-15,92;UBERON:0000956,1.72e-11,21;UBERON:0001869,1.72e-11,21;UBERON:0000203,1.72e-11,21;UBERON:0002619,4.74e-09,17;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0002420,8.20e-07,8;UBERON:0007245,8.20e-07,8;UBERON:0010009,8.20e-07,8;UBERON:0010011,8.20e-07,8;UBERON:0000454,8.20e-07,8;UBERON:0002021,9.98e-07,10;UBERON:0000411,9.98e-07,10;UBERON:0001950,9.98e-07,10|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.183546752161682,0,1.30815093828268,1.09843091367236,0.388859798148567,2.37976916763116,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,5.66486090406874,8.99284664762456,6.97214543856797,0,0.889294796111139,0.449949858640699,0,0,3.59520132622086,3.07374644257244,2.59224030771194,5.67024940993101,3.99617426567626,6.56997264128748,6.84692476950002,4.04219637409348,3.25874601462004,4.5960939330501,7.70811166995721,4.85211884723713,5.68344173048101,6.4624280987795,7.68496206260241,6.77187381723788,3.62937898701795,3.37657566019008,3.66715794664344,8.54422897873636,6.26435395516053,7.64237727883732,5.83091688665517,5.44115232768856,0,0,0,0,0,0,0.702222100658759,0.340860645156116,1.03914401841148,1.41335829804136,3.66192891419369,0,0,0,6.27824018932521,5.57391704045217,6.0662933401774,0.34255163915718,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,7.31951992528868,3.97948742945565,0.255457055208591,0,0,0,5.09288173976397,4.11750542536764,4.77486538028885,5.38855392596057,7.16003280524926,7.89594569326328,6.81413304884582,0.509196819251581,0.248813941220186,0,0.631325567659422,0.520481771850815,1.60931473103431,0.720248519221397,3.0140963567143,3.53789795586905,5.38077625196369,5.99691037182265,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,1.2604344302271,1.65721314909647,0.983821158737019,1.3884040159864,0.930135779001631,0.804820204198858,0.817357396570186,1.15191894939436,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.671032093801859,4.6263788684108,9.261415114135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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69480 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V038 | |||
|association_with_transcript=-247bp_to_ENSMUST00000036116,NM_001033149,uc007ocm.1,uc007ocn.1_5end | |||
|cluster_id=chr12:82732033..82732108,+ | |||
|description=CAGE_peak_2_at_Ttc9_5end | |||
|id=chr12:82732033..82732108,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.51e-14!23;CL:0000337!4.51e-14!23;CL:0000221!3.58e-11!44;CL:0000133!3.58e-11!44;CL:0002319!9.47e-11!43;CL:0000540!5.39e-09!33;CL:0000047!5.39e-09!33;CL:0000031!5.39e-09!33;CL:0000404!5.39e-09!33;CL:0000055!5.71e-09!50;CL:0000393!9.06e-08!39;CL:0000211!9.06e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-18,23;CL:0000337,3.57e-18,23;CL:0000221,2.25e-13,44;CL:0000133,2.25e-13,44;CL:0002319,7.96e-13,43;CL:0000540,1.79e-10,33;CL:0000047,1.79e-10,33;CL:0000031,1.79e-10,33;CL:0000404,1.79e-10,33;CL:0000393,1.71e-07,39;CL:0000211,1.71e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.95e-24!75;UBERON:0001016!8.95e-24!75;UBERON:0001017!1.59e-22!73;UBERON:0005743!1.59e-22!73;UBERON:0000033!4.47e-21!63;UBERON:0004121!1.17e-20!102;UBERON:0000924!1.17e-20!102;UBERON:0006601!1.17e-20!102;UBERON:0001049!1.44e-20!52;UBERON:0005068!1.44e-20!52;UBERON:0006241!1.44e-20!52;UBERON:0007135!1.44e-20!52;UBERON:0000955!6.19e-19!50;UBERON:0006238!6.19e-19!50;UBERON:0002616!2.61e-18!49;UBERON:0002346!9.56e-18!71;UBERON:0003075!9.56e-18!71;UBERON:0007284!9.56e-18!71;UBERON:0002020!7.84e-17!34;UBERON:0003056!1.04e-16!49;UBERON:0003080!8.15e-15!40;UBERON:0002780!2.75e-14!39;UBERON:0001890!2.75e-14!39;UBERON:0006240!2.75e-14!39;UBERON:0002791!1.60e-13!29;UBERON:0003528!1.60e-13!29;UBERON:0001893!1.60e-13!29;UBERON:0000956!2.30e-09!21;UBERON:0001869!2.30e-09!21;UBERON:0000203!2.30e-09!21;UBERON:0000025!1.44e-08!114;UBERON:0004111!1.48e-08!122;UBERON:0007811!3.93e-08!86;UBERON:0002619!1.64e-07!17;UBERON:0000153!4.46e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-28,75;UBERON:0001017,2.73e-26,73;UBERON:0000073,3.93e-26,54;UBERON:0004121,2.97e-25,95;UBERON:0000924,2.97e-25,95;UBERON:0006601,2.97e-25,95;UBERON:0001049,1.27e-24,52;UBERON:0005068,1.27e-24,52;UBERON:0006241,1.27e-24,52;UBERON:0007135,1.27e-24,52;UBERON:0002346,2.01e-23,64;UBERON:0003075,2.01e-23,64;UBERON:0007284,2.01e-23,64;UBERON:0002020,2.33e-21,34;UBERON:0000955,3.91e-20,47;UBERON:0006238,3.91e-20,47;UBERON:0010371,6.56e-20,73;UBERON:0002616,2.40e-19,46;UBERON:0003056,1.14e-17,49;UBERON:0003528,5.55e-17,29;UBERON:0002791,5.55e-17,29;UBERON:0001893,5.55e-17,29;UBERON:0003080,1.03e-16,40;UBERON:0002780,4.88e-16,39;UBERON:0001890,4.88e-16,39;UBERON:0006240,4.88e-16,39;UBERON:0010314,7.24e-15,92;UBERON:0000956,1.72e-11,21;UBERON:0001869,1.72e-11,21;UBERON:0000203,1.72e-11,21;UBERON:0002619,4.74e-09,17;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0002420,8.20e-07,8;UBERON:0007245,8.20e-07,8;UBERON:0010009,8.20e-07,8;UBERON:0010011,8.20e-07,8;UBERON:0000454,8.20e-07,8;UBERON:0002021,9.98e-07,10;UBERON:0000411,9.98e-07,10;UBERON:0001950,9.98e-07,10 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.183546752161682,0,1.30815093828268,1.09843091367236,0.388859798148567,2.37976916763116,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,5.66486090406874,8.99284664762456,6.97214543856797,0,0.889294796111139,0.449949858640699,0,0,3.59520132622086,3.07374644257244,2.59224030771194,5.67024940993101,3.99617426567626,6.56997264128748,6.84692476950002,4.04219637409348,3.25874601462004,4.5960939330501,7.70811166995721,4.85211884723713,5.68344173048101,6.4624280987795,7.68496206260241,6.77187381723788,3.62937898701795,3.37657566019008,3.66715794664344,8.54422897873636,6.26435395516053,7.64237727883732,5.83091688665517,5.44115232768856,0,0,0,0,0,0,0.702222100658759,0.340860645156116,1.03914401841148,1.41335829804136,3.66192891419369,0,0,0,6.27824018932521,5.57391704045217,6.0662933401774,0.34255163915718,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,7.31951992528868,3.97948742945565,0.255457055208591,0,0,0,5.09288173976397,4.11750542536764,4.77486538028885,5.38855392596057,7.16003280524926,7.89594569326328,6.81413304884582,0.509196819251581,0.248813941220186,0,0.631325567659422,0.520481771850815,1.60931473103431,0.720248519221397,3.0140963567143,3.53789795586905,5.38077625196369,5.99691037182265,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0,0.834141747676794,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,1.2604344302271,1.65721314909647,0.983821158737019,1.3884040159864,0.930135779001631,0.804820204198858,0.817357396570186,1.15191894939436,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.671032093801859,4.6263788684108,9.2614151141356,0,0,0.213288250535234,0.232236671860439,1.03093969057675,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0,0.398282546508734,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.420814919341911,0.758838445491087,0.442830443938806,0.470996183524124,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0.757965647081939,0.977789858652155,1.69745085775188,1.64283173801951,1.17254380209271,0.714130922658041,1.56106918286239,0.788175720530955,0.8858587585951,0.637819074629948,0.81931657357869,1.55416483679306,1.01254341007058,0,0,0,0,8.66973185934077,7.85318300167761,0,1.26235463602186,0,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0,0.876767573733936,0.790575555893047,6.10510501201433,0.141940085208269,0.178065603667255,0.325773918707152,0.659880491890142,0,0.971122544619926,0.302323556964751,2.45186603682668,0.885905678642318,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,0,1.70219802876894,1.62054984628179,1.16422815404479,0.428674070063185,0.886701168211368,0.178368817602071,0.822745103010605,1.522324745573,0,0.21183207086382,0.220528398054962,0.8244312647074,0.807322133479528,0.301564624640779,0.238744688006273,0.984845398470368,0,9.08583979851498,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0.138199973804424,0,1.26534397432454,1.82987520414164,2.16010681643603,1.67270636811575,1.09181281873089,0.539457385539283,1.07449492442937,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0,0.516639293910924,0.675824501963113,0,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,2.49403421976732,0.221985953374065,0,0.167884616364078,0.772758376128762,0.187682475451182,2.19781949120718,0.643105137237198,0,4.51801474093653,2.76195141904306,1.14579102687879,3.95262319390481,6.16574267793578,5.2877572817279,5.40018000185445,3.60256962579376,2.26571204492102,4.14208249401456,1.24544817101012,1.99512436700516,1.36586884603307,1.45864030240976,1.04806581313991,2.75765262675021,2.889207461421,1.85431551515005,1.28367683836726,2.27427490587418,2.28131369901216,1.69763707247469,2.1537546718073,1.85672941974121,1.95280594449085,1.42888107384922,1.85414921511769,2.12200142510076,0.412085900803307,2.20798380201596,1.37147700954166,1.24233064311536,0.953744759789284,2.0348498328526,1.97629698872194,2.11536519729191,2.0122077016005,2.89376682581627,2.58027816307137,1.68342681497322,3.08451047122853,2.26560309463796,2.45538625901814,1.85924209423159,2.12197272079256,4.24677982494508,2.33931608445408,1.28922632428979,2.10417165275728,1.98532277207564,1.85494268496337 | |||
|short_description=p2@Ttc9 | |||
}} |
Revision as of 08:26, 5 August 2015
Short description: | p2@Ttc9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ttc9_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -247bp_to_ENSMUST00000036116, NM_001033149, uc007ocm.1, uc007ocn.1_5end |
EntrezGene: | 69480 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.57e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-18 | 23 |
ectodermal cell | 2.25e-13 | 44 |
neurectodermal cell | 2.25e-13 | 44 |
neural cell | 7.96e-13 | 43 |
neuron | 1.79e-10 | 33 |
neuronal stem cell | 1.79e-10 | 33 |
neuroblast | 1.79e-10 | 33 |
electrically signaling cell | 1.79e-10 | 33 |
electrically responsive cell | 1.71e-07 | 39 |
electrically active cell | 1.71e-07 | 39 |