FFCP PHASE1:Mm9::chr2:66248140..66248191,-: Difference between revisions
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{{FFCP|EntrezGene=20265|HGNC=|MCL_coexpression_id=1|UniProt=A2APX8|association_with_transcript=-19bp_to_ENSMUST00000112366_5end|description=CAGE_peak_1_at_Scn1a_5end|id=chr2:66248140..66248191,-|ontology_enrichment_celltype=CL:0000117!2.65e-12!23;CL:0000337!2.65e-12!23;CL:0000540!3.80e-11!33;CL:0000047!3.80e-11!33;CL:0000031!3.80e-11!33;CL:0000404!3.80e-11!33;CL:0000221!3.40e-08!44;CL:0000133!3.40e-08!44;CL:0002319!4.74e-08!43;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-16,23;CL:0000337,3.76e-16,23;CL:0000540,9.13e-11,33;CL:0000047,9.13e-11,33;CL:0000031,9.13e-11,33;CL:0000404,9.13e-11,33;CL:0000393,5.39e-08,39;CL:0000211,5.39e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.57e-25!71;UBERON:0003075!3.57e-25!71;UBERON:0007284!3.57e-25!71;UBERON:0000073!1.21e-24!75;UBERON:0001016!1.21e-24!75;UBERON:0001017!1.84e-24!73;UBERON:0005743!1.84e-24!73;UBERON:0000033!7.07e-24!63;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0001049!2.69e-22!52;UBERON:0005068!2.69e-22!52;UBERON:0006241!2.69e-22!52;UBERON:0007135!2.69e-22!52;UBERON:0000955!3.55e-21!50;UBERON:0006238!3.55e-21!50;UBERON:0002616!1.63e-20!49;UBERON:0003056!3.10e-20!49;UBERON:0002020!1.67e-17!34;UBERON:0000153!2.29e-17!94;UBERON:0003080!3.56e-17!40;UBERON:0002780!1.95e-16!39;UBERON:0001890!1.95e-16!39;UBERON:0006240!1.95e-16!39;UBERON:0007811!2.98e-16!86;UBERON:0002791!1.47e-14!29;UBERON:0003528!1.47e-14!29;UBERON:0001893!1.47e-14!29;UBERON:0000956!5.43e-10!21;UBERON:0001869!5.43e-10!21;UBERON:0000203!5.43e-10!21;UBERON:0002021!2.88e-08!10;UBERON:0000411!2.88e-08!10;UBERON:0001950!2.88e-08!10;UBERON:0002619!3.11e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-34,54;UBERON:0002346,3.41e-33,64;UBERON:0003075,3.41e-33,64;UBERON:0007284,3.41e-33,64;UBERON:0001049,5.79e-32,52;UBERON:0005068,5.79e-32,52;UBERON:0006241,5.79e-32,52;UBERON:0007135,5.79e-32,52;UBERON:0001017,3.71e-28,73;UBERON:0010371,7.00e-28,73;UBERON:0000955,3.00e-27,47;UBERON:0006238,3.00e-27,47;UBERON:0001016,6.67e-27,75;UBERON:0002616,2.65e-26,46;UBERON:0003056,5.88e-26,49;UBERON:0002020,1.12e-25,34;UBERON:0004121,3.44e-24,95;UBERON:0000924,3.44e-24,95;UBERON:0006601,3.44e-24,95;UBERON:0003080,1.17e-23,40;UBERON:0002780,1.37e-22,39;UBERON:0001890,1.37e-22,39;UBERON:0006240,1.37e-22,39;UBERON:0003528,2.33e-21,29;UBERON:0002791,2.33e-21,29;UBERON:0001893,2.33e-21,29;UBERON:0010314,2.51e-18,92;UBERON:0000956,1.17e-14,21;UBERON:0001869,1.17e-14,21;UBERON:0000203,1.17e-14,21;UBERON:0002619,4.28e-12,17;UBERON:0002021,2.55e-11,10;UBERON:0000411,2.55e-11,10;UBERON:0001950,2.55e-11,10;UBERON:0003076,1.43e-08,12;UBERON:0003057,1.43e-08,12;UBERON:0002420,6.60e-08,8;UBERON:0007245,6.60e-08,8;UBERON:0010009,6.60e-08,8;UBERON:0010011,6.60e-08,8;UBERON:0000454,6.60e-08,8|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.90330914463737,2.56511282830212,1.89292465216244,6.56997264128748,6.62605622854841,3.06226998037385,2.68367318851062,1.83843757322004,46.2486700197433,52.8625579672677,47.925238375948,2.90149833006426,3.11057988248193,5.73004707612436,27.9182999001381,25.8870800614573,29.795658316478,14.4368006882097,16.5151149726959,8.38797506213853,0.37863096666592,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.346970653532272,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,72.3168568618521,68.0701797143729,0,0,0,0,63.5112311076448,60.8475801748773,8.41884159156192,54.5808365403748,71.3446125951622,59.0118046549151,42.831693449888,0.611036183101898,0.497627882440372,0.505445516867349,2.73574412652416,1.56144531555244,0.919608417733892,1.0803727788321,0.753524089178575,1.97305847538851,3.20284300712124,2.24884138943349,9.31332134660456,0,1.32374256117473,2.28736461413134,1.09597866213787,0.834141747676794,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.134206418760372,42.899149507082,5.45394445610208,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3486879140425,64.4664276257117,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.66839602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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20265 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2APX8 | |||
|association_with_transcript=-19bp_to_ENSMUST00000112366_5end | |||
|cluster_id=chr2:66248140..66248191,- | |||
|description=CAGE_peak_1_at_Scn1a_5end | |||
|id=chr2:66248140..66248191,- | |||
|ontology_enrichment_celltype=CL:0000117!2.65e-12!23;CL:0000337!2.65e-12!23;CL:0000540!3.80e-11!33;CL:0000047!3.80e-11!33;CL:0000031!3.80e-11!33;CL:0000404!3.80e-11!33;CL:0000221!3.40e-08!44;CL:0000133!3.40e-08!44;CL:0002319!4.74e-08!43;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-16,23;CL:0000337,3.76e-16,23;CL:0000540,9.13e-11,33;CL:0000047,9.13e-11,33;CL:0000031,9.13e-11,33;CL:0000404,9.13e-11,33;CL:0000393,5.39e-08,39;CL:0000211,5.39e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.57e-25!71;UBERON:0003075!3.57e-25!71;UBERON:0007284!3.57e-25!71;UBERON:0000073!1.21e-24!75;UBERON:0001016!1.21e-24!75;UBERON:0001017!1.84e-24!73;UBERON:0005743!1.84e-24!73;UBERON:0000033!7.07e-24!63;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0001049!2.69e-22!52;UBERON:0005068!2.69e-22!52;UBERON:0006241!2.69e-22!52;UBERON:0007135!2.69e-22!52;UBERON:0000955!3.55e-21!50;UBERON:0006238!3.55e-21!50;UBERON:0002616!1.63e-20!49;UBERON:0003056!3.10e-20!49;UBERON:0002020!1.67e-17!34;UBERON:0000153!2.29e-17!94;UBERON:0003080!3.56e-17!40;UBERON:0002780!1.95e-16!39;UBERON:0001890!1.95e-16!39;UBERON:0006240!1.95e-16!39;UBERON:0007811!2.98e-16!86;UBERON:0002791!1.47e-14!29;UBERON:0003528!1.47e-14!29;UBERON:0001893!1.47e-14!29;UBERON:0000956!5.43e-10!21;UBERON:0001869!5.43e-10!21;UBERON:0000203!5.43e-10!21;UBERON:0002021!2.88e-08!10;UBERON:0000411!2.88e-08!10;UBERON:0001950!2.88e-08!10;UBERON:0002619!3.11e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-34,54;UBERON:0002346,3.41e-33,64;UBERON:0003075,3.41e-33,64;UBERON:0007284,3.41e-33,64;UBERON:0001049,5.79e-32,52;UBERON:0005068,5.79e-32,52;UBERON:0006241,5.79e-32,52;UBERON:0007135,5.79e-32,52;UBERON:0001017,3.71e-28,73;UBERON:0010371,7.00e-28,73;UBERON:0000955,3.00e-27,47;UBERON:0006238,3.00e-27,47;UBERON:0001016,6.67e-27,75;UBERON:0002616,2.65e-26,46;UBERON:0003056,5.88e-26,49;UBERON:0002020,1.12e-25,34;UBERON:0004121,3.44e-24,95;UBERON:0000924,3.44e-24,95;UBERON:0006601,3.44e-24,95;UBERON:0003080,1.17e-23,40;UBERON:0002780,1.37e-22,39;UBERON:0001890,1.37e-22,39;UBERON:0006240,1.37e-22,39;UBERON:0003528,2.33e-21,29;UBERON:0002791,2.33e-21,29;UBERON:0001893,2.33e-21,29;UBERON:0010314,2.51e-18,92;UBERON:0000956,1.17e-14,21;UBERON:0001869,1.17e-14,21;UBERON:0000203,1.17e-14,21;UBERON:0002619,4.28e-12,17;UBERON:0002021,2.55e-11,10;UBERON:0000411,2.55e-11,10;UBERON:0001950,2.55e-11,10;UBERON:0003076,1.43e-08,12;UBERON:0003057,1.43e-08,12;UBERON:0002420,6.60e-08,8;UBERON:0007245,6.60e-08,8;UBERON:0010009,6.60e-08,8;UBERON:0010011,6.60e-08,8;UBERON:0000454,6.60e-08,8 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.90330914463737,2.56511282830212,1.89292465216244,6.56997264128748,6.62605622854841,3.06226998037385,2.68367318851062,1.83843757322004,46.2486700197433,52.8625579672677,47.925238375948,2.90149833006426,3.11057988248193,5.73004707612436,27.9182999001381,25.8870800614573,29.795658316478,14.4368006882097,16.5151149726959,8.38797506213853,0.37863096666592,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.346970653532272,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,72.3168568618521,68.0701797143729,0,0,0,0,63.5112311076448,60.8475801748773,8.41884159156192,54.5808365403748,71.3446125951622,59.0118046549151,42.831693449888,0.611036183101898,0.497627882440372,0.505445516867349,2.73574412652416,1.56144531555244,0.919608417733892,1.0803727788321,0.753524089178575,1.97305847538851,3.20284300712124,2.24884138943349,9.31332134660456,0,1.32374256117473,2.28736461413134,1.09597866213787,0.834141747676794,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.134206418760372,42.899149507082,5.45394445610208,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3486879140425,64.4664276257117,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0.790575555893047,40.4864858691477,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0.258717367565509,1.92903331528433,1.59606210278046,2.31879462882692,1.64549020602121,0.913394847343798,0,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,89.3749955690657,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,1.10717597753397,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,1.58005560314089,0.810900861160657,0.410843828659309,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.194915761479505,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0.501572104035363,45.7448992519824,52.016751725311,42.9671635079547,40.9010573977977,57.546931660734,63.4530873807348,56.7018900194717,63.4952896546151,69.3307885745833,48.1517089929193,0.518936737920883,2.79317411380722,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,2.22246727801615,0.412070114477788,1.92551525755089,2.52697211763797,1.77435509923168,2.07488975524684,3.183811253976,3.20125762024346,2.87177344778066,0.952587382566147,1.62238056322798,2.70072908649187,2.06042950401653,2.94397840268795,2.40008476669791,3.01708870470874,2.86123427936785,2.90692833264657,3.10560955370591,1.69229215783353,2.74391959309159,3.6829759601298,3.66671107383827,2.24456908663095,2.37270036248348,2.26560309463796,2.86461730218783,2.01417893541756,2.50778594275484,2.49810577937946,2.57324769289949,1.50409737833809,1.53030665655075,0.441182838239031,0.927471342481686 | |||
|short_description=p1@Scn1a | |||
}} |
Revision as of 08:31, 5 August 2015
Short description: | p1@Scn1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scn1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_ENSMUST00000112366_5end |
EntrezGene: | 20265 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.76e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-16 | 23 |
neuron | 9.13e-11 | 33 |
neuronal stem cell | 9.13e-11 | 33 |
neuroblast | 9.13e-11 | 33 |
electrically signaling cell | 9.13e-11 | 33 |
electrically responsive cell | 5.39e-08 | 39 |
electrically active cell | 5.39e-08 | 39 |