FFCP PHASE1:Mm9::chr17:86012772..86012825,+: Difference between revisions
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{{FFCP|EntrezGene=20473|HGNC=|MCL_coexpression_id=492|UniProt=Q62233,B2RSE8|association_with_transcript=-122bp_to_ENSMUST00000162989,uc008dtz.2_5end|description=CAGE_peak_4_at_Six3_5end|id=chr17:86012772..86012825,+|ontology_enrichment_celltype=CL:0000117!4.19e-07!23;CL:0000337!4.19e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.74e-09,23;CL:0000337,4.74e-09,23;CL:0002613,1.79e-07,3;CL:0000120,5.72e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.00e-23!49;UBERON:0000033!9.66e-21!63;UBERON:0002616!2.95e-14!49;UBERON:0003080!5.55e-14!40;UBERON:0000955!8.70e-14!50;UBERON:0006238!8.70e-14!50;UBERON:0002346!1.17e-13!71;UBERON:0003075!1.17e-13!71;UBERON:0007284!1.17e-13!71;UBERON:0001894!3.50e-13!10;UBERON:0006222!3.50e-13!10;UBERON:0002780!3.78e-13!39;UBERON:0001890!3.78e-13!39;UBERON:0006240!3.78e-13!39;UBERON:0004121!8.39e-13!102;UBERON:0000924!8.39e-13!102;UBERON:0006601!8.39e-13!102;UBERON:0000970!1.25e-12!9;UBERON:0000019!1.25e-12!9;UBERON:0000047!1.25e-12!9;UBERON:0004088!1.25e-12!9;UBERON:0002104!1.25e-12!9;UBERON:0001456!1.25e-12!9;UBERON:0003072!1.25e-12!9;UBERON:0003071!1.25e-12!9;UBERON:0004128!1.25e-12!9;UBERON:0007811!1.28e-12!86;UBERON:0000007!4.00e-11!8;UBERON:0003296!4.00e-11!8;UBERON:0010133!4.00e-11!8;UBERON:0000073!7.71e-11!75;UBERON:0001016!7.71e-11!75;UBERON:0001017!1.03e-10!73;UBERON:0005743!1.03e-10!73;UBERON:0000153!1.55e-10!94;UBERON:0001444!7.99e-10!11;UBERON:0001049!1.01e-09!52;UBERON:0005068!1.01e-09!52;UBERON:0006241!1.01e-09!52;UBERON:0007135!1.01e-09!52;UBERON:0000020!8.87e-09!12;UBERON:0001032!8.87e-09!12;UBERON:0004456!8.87e-09!12;UBERON:0005085!6.73e-08!13;UBERON:0002420!2.45e-07!8;UBERON:0007245!2.45e-07!8;UBERON:0010009!2.45e-07!8;UBERON:0010011!2.45e-07!8;UBERON:0000454!2.45e-07!8;UBERON:0000369!6.25e-07!5;UBERON:0002435!6.25e-07!5;UBERON:0000204!6.25e-07!5;UBERON:0010082!6.25e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.20e-40,49;UBERON:0002346,1.86e-29,64;UBERON:0003075,1.86e-29,64;UBERON:0007284,1.86e-29,64;UBERON:0004121,4.63e-25,95;UBERON:0000924,4.63e-25,95;UBERON:0006601,4.63e-25,95;UBERON:0010371,6.01e-25,73;UBERON:0001894,5.48e-23,10;UBERON:0006222,5.48e-23,10;UBERON:0003080,6.12e-23,40;UBERON:0000970,5.74e-22,9;UBERON:0000019,5.74e-22,9;UBERON:0000047,5.74e-22,9;UBERON:0010312,5.74e-22,9;UBERON:0004088,5.74e-22,9;UBERON:0002104,5.74e-22,9;UBERON:0001456,5.74e-22,9;UBERON:0003072,5.74e-22,9;UBERON:0004128,5.74e-22,9;UBERON:0003071,5.74e-22,9;UBERON:0002780,1.95e-21,39;UBERON:0001890,1.95e-21,39;UBERON:0006240,1.95e-21,39;UBERON:0002616,2.99e-19,46;UBERON:0000007,3.48e-19,8;UBERON:0003296,3.48e-19,8;UBERON:0010133,3.48e-19,8;UBERON:0000073,6.29e-19,54;UBERON:0000955,9.98e-19,47;UBERON:0006238,9.98e-19,47;UBERON:0010314,2.54e-18,92;UBERON:0001444,1.27e-17,11;UBERON:0001017,1.29e-16,73;UBERON:0001049,2.04e-16,52;UBERON:0005068,2.04e-16,52;UBERON:0006241,2.04e-16,52;UBERON:0007135,2.04e-16,52;UBERON:0001016,5.28e-16,75;UBERON:0000020,5.40e-16,12;UBERON:0001032,5.40e-16,12;UBERON:0004456,5.40e-16,12;UBERON:0000033,1.29e-14,13;UBERON:0005085,1.29e-14,13;UBERON:0000369,1.81e-11,5;UBERON:0002435,1.81e-11,5;UBERON:0000204,1.81e-11,5;UBERON:0010082,1.81e-11,5;UBERON:0002420,1.23e-09,8;UBERON:0007245,1.23e-09,8;UBERON:0010009,1.23e-09,8;UBERON:0010011,1.23e-09,8;UBERON:0000454,1.23e-09,8;UBERON:0003528,5.29e-07,29;UBERON:0002791,5.29e-07,29;UBERON:0001893,5.29e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,4.61340983742391,4.6663175777828,0.55994568650145,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0,1.22490799214954,1.91690942036473,0,2.20231761998777,1.27687338085188,0.614426133024974,6.59431438650969,3.84248103130121,4.16730696445408,1.11673199600552,0,0.916789486660861,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,5.03250663100489,4.52355667606312,1.04294592115366,0.511430914660661,3.32460871295296,4.38051410282946,0,0,0,3.99839526184301,8.32770834961304,11.2652031172402,15.8454674228707,14.6183673300644,20.342913246247,24.8540617352609,18.0844328400277,8.2785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44703369206061,8.46287141947158,9.83125996748934,8.3591443662321,9.75371285032505,9.27517851530767,9.3792941743209,10.0473433207818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.735374033800057,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.768301828858431,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,1.1921809497366,0.436039249896986,0.941093804153306,0.338458431566706,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.593175090620871,0.394017929502254,0,0,0.192906610981141,3.74715866906919,0.935726433781634,0,0,0,0|short_description=p4@Six3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20473 | |||
|HGNC= | |||
|MCL_coexpression_id=492 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62233,uniprot:B2RSE8 | |||
|association_with_transcript=-122bp_to_ENSMUST00000162989,uc008dtz.2_5end | |||
|cluster_id=chr17:86012772..86012825,+ | |||
|description=CAGE_peak_4_at_Six3_5end | |||
|id=chr17:86012772..86012825,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.19e-07!23;CL:0000337!4.19e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.74e-09,23;CL:0000337,4.74e-09,23;CL:0002613,1.79e-07,3;CL:0000120,5.72e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.00e-23!49;UBERON:0000033!9.66e-21!63;UBERON:0002616!2.95e-14!49;UBERON:0003080!5.55e-14!40;UBERON:0000955!8.70e-14!50;UBERON:0006238!8.70e-14!50;UBERON:0002346!1.17e-13!71;UBERON:0003075!1.17e-13!71;UBERON:0007284!1.17e-13!71;UBERON:0001894!3.50e-13!10;UBERON:0006222!3.50e-13!10;UBERON:0002780!3.78e-13!39;UBERON:0001890!3.78e-13!39;UBERON:0006240!3.78e-13!39;UBERON:0004121!8.39e-13!102;UBERON:0000924!8.39e-13!102;UBERON:0006601!8.39e-13!102;UBERON:0000970!1.25e-12!9;UBERON:0000019!1.25e-12!9;UBERON:0000047!1.25e-12!9;UBERON:0004088!1.25e-12!9;UBERON:0002104!1.25e-12!9;UBERON:0001456!1.25e-12!9;UBERON:0003072!1.25e-12!9;UBERON:0003071!1.25e-12!9;UBERON:0004128!1.25e-12!9;UBERON:0007811!1.28e-12!86;UBERON:0000007!4.00e-11!8;UBERON:0003296!4.00e-11!8;UBERON:0010133!4.00e-11!8;UBERON:0000073!7.71e-11!75;UBERON:0001016!7.71e-11!75;UBERON:0001017!1.03e-10!73;UBERON:0005743!1.03e-10!73;UBERON:0000153!1.55e-10!94;UBERON:0001444!7.99e-10!11;UBERON:0001049!1.01e-09!52;UBERON:0005068!1.01e-09!52;UBERON:0006241!1.01e-09!52;UBERON:0007135!1.01e-09!52;UBERON:0000020!8.87e-09!12;UBERON:0001032!8.87e-09!12;UBERON:0004456!8.87e-09!12;UBERON:0005085!6.73e-08!13;UBERON:0002420!2.45e-07!8;UBERON:0007245!2.45e-07!8;UBERON:0010009!2.45e-07!8;UBERON:0010011!2.45e-07!8;UBERON:0000454!2.45e-07!8;UBERON:0000369!6.25e-07!5;UBERON:0002435!6.25e-07!5;UBERON:0000204!6.25e-07!5;UBERON:0010082!6.25e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.20e-40,49;UBERON:0002346,1.86e-29,64;UBERON:0003075,1.86e-29,64;UBERON:0007284,1.86e-29,64;UBERON:0004121,4.63e-25,95;UBERON:0000924,4.63e-25,95;UBERON:0006601,4.63e-25,95;UBERON:0010371,6.01e-25,73;UBERON:0001894,5.48e-23,10;UBERON:0006222,5.48e-23,10;UBERON:0003080,6.12e-23,40;UBERON:0000970,5.74e-22,9;UBERON:0000019,5.74e-22,9;UBERON:0000047,5.74e-22,9;UBERON:0010312,5.74e-22,9;UBERON:0004088,5.74e-22,9;UBERON:0002104,5.74e-22,9;UBERON:0001456,5.74e-22,9;UBERON:0003072,5.74e-22,9;UBERON:0004128,5.74e-22,9;UBERON:0003071,5.74e-22,9;UBERON:0002780,1.95e-21,39;UBERON:0001890,1.95e-21,39;UBERON:0006240,1.95e-21,39;UBERON:0002616,2.99e-19,46;UBERON:0000007,3.48e-19,8;UBERON:0003296,3.48e-19,8;UBERON:0010133,3.48e-19,8;UBERON:0000073,6.29e-19,54;UBERON:0000955,9.98e-19,47;UBERON:0006238,9.98e-19,47;UBERON:0010314,2.54e-18,92;UBERON:0001444,1.27e-17,11;UBERON:0001017,1.29e-16,73;UBERON:0001049,2.04e-16,52;UBERON:0005068,2.04e-16,52;UBERON:0006241,2.04e-16,52;UBERON:0007135,2.04e-16,52;UBERON:0001016,5.28e-16,75;UBERON:0000020,5.40e-16,12;UBERON:0001032,5.40e-16,12;UBERON:0004456,5.40e-16,12;UBERON:0000033,1.29e-14,13;UBERON:0005085,1.29e-14,13;UBERON:0000369,1.81e-11,5;UBERON:0002435,1.81e-11,5;UBERON:0000204,1.81e-11,5;UBERON:0010082,1.81e-11,5;UBERON:0002420,1.23e-09,8;UBERON:0007245,1.23e-09,8;UBERON:0010009,1.23e-09,8;UBERON:0010011,1.23e-09,8;UBERON:0000454,1.23e-09,8;UBERON:0003528,5.29e-07,29;UBERON:0002791,5.29e-07,29;UBERON:0001893,5.29e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,4.61340983742391,4.6663175777828,0.55994568650145,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0,1.22490799214954,1.91690942036473,0,2.20231761998777,1.27687338085188,0.614426133024974,6.59431438650969,3.84248103130121,4.16730696445408,1.11673199600552,0,0.916789486660861,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,5.03250663100489,4.52355667606312,1.04294592115366,0.511430914660661,3.32460871295296,4.38051410282946,0,0,0,3.99839526184301,8.32770834961304,11.2652031172402,15.8454674228707,14.6183673300644,20.342913246247,24.8540617352609,18.0844328400277,8.2785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44703369206061,8.46287141947158,9.83125996748934,8.3591443662321,9.75371285032505,9.27517851530767,9.3792941743209,10.0473433207818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.735374033800057,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.768301828858431,0.689225627467359,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,1.1921809497366,0.436039249896986,0.941093804153306,0.338458431566706,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.593175090620871,0.394017929502254,0,0,0.192906610981141,3.74715866906919,0.935726433781634,0,0,0,0 | |||
|short_description=p4@Six3 | |||
}} |
Revision as of 10:44, 5 August 2015
Short description: | p4@Six3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Six3_5end |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | -122bp_to_ENSMUST00000162989, uc008dtz.2_5end |
EntrezGene: | 20473 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.74e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.74e-09 | 23 |
striatum neuron | 1.79e-07 | 3 |
granule cell | 5.72e-07 | 3 |