FFCP PHASE1:Mm9::chr13:100204050..100204080,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204050..100204080,-|id=chr13:100204050..100204080,-|ontology_enrichment_celltype=CL:0000117!1.46e-14!23;CL:0000337!1.46e-14!23;CL:0000540!5.04e-14!33;CL:0000047!5.04e-14!33;CL:0000031!5.04e-14!33;CL:0000404!5.04e-14!33;CL:0000393!2.35e-10!39;CL:0000211!2.35e-10!39;CL:0002319!5.03e-09!43;CL:0000221!6.51e-09!44;CL:0000133!6.51e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-20,23;CL:0000337,1.57e-20,23;CL:0000540,4.85e-20,33;CL:0000047,4.85e-20,33;CL:0000031,4.85e-20,33;CL:0000404,4.85e-20,33;CL:0000393,2.91e-15,39;CL:0000211,2.91e-15,39;CL:0002319,1.05e-13,43;CL:0000221,3.76e-13,44;CL:0000133,3.76e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.86e-24!71;UBERON:0003075!2.86e-24!71;UBERON:0007284!2.86e-24!71;UBERON:0001017!6.13e-23!73;UBERON:0005743!6.13e-23!73;UBERON:0000073!8.61e-23!75;UBERON:0001016!8.61e-23!75;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0000955!8.58e-21!50;UBERON:0006238!8.58e-21!50;UBERON:0002616!1.86e-20!49;UBERON:0004121!2.05e-20!102;UBERON:0000924!2.05e-20!102;UBERON:0006601!2.05e-20!102;UBERON:0000033!5.92e-20!63;UBERON:0003056!1.25e-19!49;UBERON:0002020!5.54e-19!34;UBERON:0003080!7.74e-18!40;UBERON:0002780!2.50e-17!39;UBERON:0001890!2.50e-17!39;UBERON:0006240!2.50e-17!39;UBERON:0002791!1.58e-16!29;UBERON:0003528!1.58e-16!29;UBERON:0001893!1.58e-16!29;UBERON:0000956!8.11e-12!21;UBERON:0001869!8.11e-12!21;UBERON:0000203!8.11e-12!21;UBERON:0007811!1.65e-09!86;UBERON:0002619!1.88e-09!17;UBERON:0000153!4.76e-09!94;UBERON:0000025!1.02e-08!114;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10;UBERON:0004111!4.84e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-32,73;UBERON:0001016,2.56e-32,75;UBERON:0002346,4.17e-31,64;UBERON:0003075,4.17e-31,64;UBERON:0007284,4.17e-31,64;UBERON:0000073,1.36e-30,54;UBERON:0004121,1.83e-28,95;UBERON:0000924,1.83e-28,95;UBERON:0006601,1.83e-28,95;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0002020,1.49e-26,34;UBERON:0010371,7.01e-25,73;UBERON:0003056,7.34e-25,49;UBERON:0010314,7.86e-25,92;UBERON:0000955,2.70e-24,47;UBERON:0006238,2.70e-24,47;UBERON:0002616,8.16e-24,46;UBERON:0003528,5.80e-23,29;UBERON:0002791,5.80e-23,29;UBERON:0001893,5.80e-23,29;UBERON:0003080,7.65e-23,40;UBERON:0002780,4.13e-22,39;UBERON:0001890,4.13e-22,39;UBERON:0006240,4.13e-22,39;UBERON:0000956,4.26e-16,21;UBERON:0001869,4.26e-16,21;UBERON:0000203,4.26e-16,21;UBERON:0002619,1.17e-12,17;UBERON:0002021,3.43e-11,10;UBERON:0000411,3.43e-11,10;UBERON:0001950,3.43e-11,10;UBERON:0000025,2.82e-09,114;UBERON:0004111,4.52e-08,122;UBERON:0002420,5.28e-08,8;UBERON:0007245,5.28e-08,8;UBERON:0010009,5.28e-08,8;UBERON:0010011,5.28e-08,8;UBERON:0000454,5.28e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,6.06949382578793,7.93486468908049,3.1691570175309,0.338844532069132,0,0,0,0,0,0,10.3689612308478,8.37036817656482,6.09942387919008,1.42825492201902,1.32521124570968,5.26710436624302,5.65488279007595,5.51531271966013,5.50579404996943,15.0671058940522,15.5142598588806,5.27545150920775,13.4486836095542,19.7947080811569,3.90856198601933,3.93933827022176,7.79271063661732,12.0797720044204,16.657486653495,5.21918448310842,0.075726193333184,1.20914496170857,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,1.82679286987285,0.461230994512117,1.3565037649736,2.23418543557839,0.251333182659351,0.247194967734374,0.144599356919912,0,0.808834249737046,0.220841518460394,0,0,1.46390398505774,2.51336048176146,0,0,0,0,3.14560342750128,1.83000241127451,9.5497307605777,3.30266208365325,6.90431734791892,2.49345653471472,3.40706652442291,1.73126918545538,0.248813941220186,0.505445516867349,0.210441855886474,2.34216797332867,0,0.540186389416048,4.37043971723574,3.33378845841506,4.74020765053944,2.90475346135159,5.17406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,2.78047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.414251545071004,1.87620847984877,1.2604344302271,1.18372367792605,0.983821158737019,1.3884040159864,2.09280550275367,0.268273401399619,1.05088808130453,0.658239399653922,1.80584210487005,0.405344047729279,0,0.658650345873152,0.134206418760372,1.89260953707715,16.4647379806855,0,0,0.639864751605702,0.696710015581316,0,0.605050573870028,0,0,0.474529061544512,0,1.25667604400135,0.397912944082302,0.19496408711912,0,1.08069024937347,0,0,0.571242563048644,0,0.814605311381257,0.387904974335251,0.561086559122548,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0.780534591431195,0.788175720530955,0.44292937929755,0.956728611944923,0.163863314715738,0.690739927463582,0,0,0,0,0,2.88991061978026,5.74337264301796,0.327869890753351,0,1.57754109708128,0.390438744296638,2.58508077279359,1.43381278771531,1.11399337041197,0,1.21443210502468,2.63030272120181,1.58115111178609,1.60660658210904,0,0.178065603667255,0.325773918707152,0.494910368917606,0,1.21390318077491,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,1.42598951353889,0,0,0,0,1.62054984628179,1.4229455216103,0.214337035031592,0.886701168211368,2.49716344642899,1.48094118541909,0.913394847343798,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,4.45020724825223,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.756037385752609,1.67270636811575,0.436725127492355,1.48350781023303,0.743881101528023,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,1.35164900392623,1.29092962510329,1.95306577265925,0.629156066554265,1.44950472495604,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0.750729901804728,0.183151624267265,0,1.00314420807073,18.0720589637461,12.4287813856938,16.0410743763031,15.1230800462445,5.48066015816514,10.5755145634558,9.45031500324528,9.00642406448441,13.5942722695261,10.8729665467882,4.35906859853542,2.39414924040619,0.341467211508268,0.729320151204882,0.209613162627982,0.735374033800057,0.222246727801615,1.44224540067226,1.28367683836726,1.51618327058278,1.2673964994512,1.13175804831646,1.40462261204824,0.832326981263301,0.516919220600519,0.476293691283074,1.62238056322798,1.92909220463705,0.412085900803307,1.61918812147837,2.05721551431249,2.8396128985494,0.953744759789284,2.0348498328526,0.846984423737976,1.18460451048347,1.82927972872773,4.73525480588117,2.30866993537965,2.24456908663095,0.949080144993393,1.67457620038458,2.04615521584845,0.77468420592983,0.578719832943424,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr13:100204050..100204080,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100204050..100204080,- | |||
|description=CAGE_peak_at_chr13:100204050..100204080,- | |||
|id=chr13:100204050..100204080,- | |||
|ontology_enrichment_celltype=CL:0000117!1.46e-14!23;CL:0000337!1.46e-14!23;CL:0000540!5.04e-14!33;CL:0000047!5.04e-14!33;CL:0000031!5.04e-14!33;CL:0000404!5.04e-14!33;CL:0000393!2.35e-10!39;CL:0000211!2.35e-10!39;CL:0002319!5.03e-09!43;CL:0000221!6.51e-09!44;CL:0000133!6.51e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-20,23;CL:0000337,1.57e-20,23;CL:0000540,4.85e-20,33;CL:0000047,4.85e-20,33;CL:0000031,4.85e-20,33;CL:0000404,4.85e-20,33;CL:0000393,2.91e-15,39;CL:0000211,2.91e-15,39;CL:0002319,1.05e-13,43;CL:0000221,3.76e-13,44;CL:0000133,3.76e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.86e-24!71;UBERON:0003075!2.86e-24!71;UBERON:0007284!2.86e-24!71;UBERON:0001017!6.13e-23!73;UBERON:0005743!6.13e-23!73;UBERON:0000073!8.61e-23!75;UBERON:0001016!8.61e-23!75;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0000955!8.58e-21!50;UBERON:0006238!8.58e-21!50;UBERON:0002616!1.86e-20!49;UBERON:0004121!2.05e-20!102;UBERON:0000924!2.05e-20!102;UBERON:0006601!2.05e-20!102;UBERON:0000033!5.92e-20!63;UBERON:0003056!1.25e-19!49;UBERON:0002020!5.54e-19!34;UBERON:0003080!7.74e-18!40;UBERON:0002780!2.50e-17!39;UBERON:0001890!2.50e-17!39;UBERON:0006240!2.50e-17!39;UBERON:0002791!1.58e-16!29;UBERON:0003528!1.58e-16!29;UBERON:0001893!1.58e-16!29;UBERON:0000956!8.11e-12!21;UBERON:0001869!8.11e-12!21;UBERON:0000203!8.11e-12!21;UBERON:0007811!1.65e-09!86;UBERON:0002619!1.88e-09!17;UBERON:0000153!4.76e-09!94;UBERON:0000025!1.02e-08!114;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10;UBERON:0004111!4.84e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-32,73;UBERON:0001016,2.56e-32,75;UBERON:0002346,4.17e-31,64;UBERON:0003075,4.17e-31,64;UBERON:0007284,4.17e-31,64;UBERON:0000073,1.36e-30,54;UBERON:0004121,1.83e-28,95;UBERON:0000924,1.83e-28,95;UBERON:0006601,1.83e-28,95;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0002020,1.49e-26,34;UBERON:0010371,7.01e-25,73;UBERON:0003056,7.34e-25,49;UBERON:0010314,7.86e-25,92;UBERON:0000955,2.70e-24,47;UBERON:0006238,2.70e-24,47;UBERON:0002616,8.16e-24,46;UBERON:0003528,5.80e-23,29;UBERON:0002791,5.80e-23,29;UBERON:0001893,5.80e-23,29;UBERON:0003080,7.65e-23,40;UBERON:0002780,4.13e-22,39;UBERON:0001890,4.13e-22,39;UBERON:0006240,4.13e-22,39;UBERON:0000956,4.26e-16,21;UBERON:0001869,4.26e-16,21;UBERON:0000203,4.26e-16,21;UBERON:0002619,1.17e-12,17;UBERON:0002021,3.43e-11,10;UBERON:0000411,3.43e-11,10;UBERON:0001950,3.43e-11,10;UBERON:0000025,2.82e-09,114;UBERON:0004111,4.52e-08,122;UBERON:0002420,5.28e-08,8;UBERON:0007245,5.28e-08,8;UBERON:0010009,5.28e-08,8;UBERON:0010011,5.28e-08,8;UBERON:0000454,5.28e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,6.06949382578793,7.93486468908049,3.1691570175309,0.338844532069132,0,0,0,0,0,0,10.3689612308478,8.37036817656482,6.09942387919008,1.42825492201902,1.32521124570968,5.26710436624302,5.65488279007595,5.51531271966013,5.50579404996943,15.0671058940522,15.5142598588806,5.27545150920775,13.4486836095542,19.7947080811569,3.90856198601933,3.93933827022176,7.79271063661732,12.0797720044204,16.657486653495,5.21918448310842,0.075726193333184,1.20914496170857,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,1.82679286987285,0.461230994512117,1.3565037649736,2.23418543557839,0.251333182659351,0.247194967734374,0.144599356919912,0,0.808834249737046,0.220841518460394,0,0,1.46390398505774,2.51336048176146,0,0,0,0,3.14560342750128,1.83000241127451,9.5497307605777,3.30266208365325,6.90431734791892,2.49345653471472,3.40706652442291,1.73126918545538,0.248813941220186,0.505445516867349,0.210441855886474,2.34216797332867,0,0.540186389416048,4.37043971723574,3.33378845841506,4.74020765053944,2.90475346135159,5.17406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,2.78047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.414251545071004,1.87620847984877,1.2604344302271,1.18372367792605,0.983821158737019,1.3884040159864,2.09280550275367,0.268273401399619,1.05088808130453,0.658239399653922,1.80584210487005,0.405344047729279,0,0.658650345873152,0.134206418760372,1.89260953707715,16.4647379806855,0,0,0.639864751605702,0.696710015581316,0,0.605050573870028,0,0,0.474529061544512,0,1.25667604400135,0.397912944082302,0.19496408711912,0,1.08069024937347,0,0,0.571242563048644,0,0.814605311381257,0.387904974335251,0.561086559122548,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0.780534591431195,0.788175720530955,0.44292937929755,0.956728611944923,0.163863314715738,0.690739927463582,0,0,0,0,0,2.88991061978026,5.74337264301796,0.327869890753351,0,1.57754109708128,0.390438744296638,2.58508077279359,1.43381278771531,1.11399337041197,0,1.21443210502468,2.63030272120181,1.58115111178609,1.60660658210904,0,0.178065603667255,0.325773918707152,0.494910368917606,0,1.21390318077491,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,1.42598951353889,0,0,0,0,1.62054984628179,1.4229455216103,0.214337035031592,0.886701168211368,2.49716344642899,1.48094118541909,0.913394847343798,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,4.45020724825223,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.756037385752609,1.67270636811575,0.436725127492355,1.48350781023303,0.743881101528023,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,1.35164900392623,1.29092962510329,1.95306577265925,0.629156066554265,1.44950472495604,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0.750729901804728,0.183151624267265,0,1.00314420807073,18.0720589637461,12.4287813856938,16.0410743763031,15.1230800462445,5.48066015816514,10.5755145634558,9.45031500324528,9.00642406448441,13.5942722695261,10.8729665467882,4.35906859853542,2.39414924040619,0.341467211508268,0.729320151204882,0.209613162627982,0.735374033800057,0.222246727801615,1.44224540067226,1.28367683836726,1.51618327058278,1.2673964994512,1.13175804831646,1.40462261204824,0.832326981263301,0.516919220600519,0.476293691283074,1.62238056322798,1.92909220463705,0.412085900803307,1.61918812147837,2.05721551431249,2.8396128985494,0.953744759789284,2.0348498328526,0.846984423737976,1.18460451048347,1.82927972872773,4.73525480588117,2.30866993537965,2.24456908663095,0.949080144993393,1.67457620038458,2.04615521584845,0.77468420592983,0.578719832943424,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr13:100204050..100204080,- | |||
}} | |||
Latest revision as of 12:26, 5 August 2015
| Short description: | p@chr13:100204050..100204080, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr13:100204050..100204080, - |
| Coexpression cluster: | MCL_coexpression_mm9:158 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.57e-20 | 23 |
| neuroblast (sensu Vertebrata) | 1.57e-20 | 23 |
| neuron | 4.85e-20 | 33 |
| neuronal stem cell | 4.85e-20 | 33 |
| neuroblast | 4.85e-20 | 33 |
| electrically signaling cell | 4.85e-20 | 33 |
| electrically responsive cell | 2.91e-15 | 39 |
| electrically active cell | 2.91e-15 | 39 |
| neural cell | 1.05e-13 | 43 |
| ectodermal cell | 3.76e-13 | 44 |
| neurectodermal cell | 3.76e-13 | 44 |