FFCP PHASE1:Mm9::chr4:63522360..63522389,-: Difference between revisions
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{{FFCP|EntrezGene=21949|HGNC=|MCL_coexpression_id=291|UniProt=P32972|association_with_transcript=0bp_to_ENSMUST00000030047_5end|description=CAGE_peak_1_at_Tnfsf8_5end|id=chr4:63522360..63522389,-|ontology_enrichment_celltype=CL:0000988!5.05e-15!32;CL:0002032!5.05e-15!32;CL:0000037!5.05e-15!32;CL:0000566!5.05e-15!32;CL:0000837!5.05e-15!32;CL:0000838!2.22e-13!12;CL:0000084!3.43e-13!11;CL:0000827!3.43e-13!11;CL:0002031!4.55e-13!25;CL:0000542!5.34e-12!13;CL:0000051!5.34e-12!13;CL:0000791!3.71e-11!9;CL:0000789!3.71e-11!9;CL:0002420!3.71e-11!9;CL:0002419!3.71e-11!9;CL:0000790!3.71e-11!9;CL:0000624!4.23e-10!8;CL:0000738!9.30e-10!17;CL:0002087!9.30e-10!17;CL:0002320!7.88e-09!46;CL:0000134!7.88e-09!46;CL:0000893!5.55e-08!6;CL:0002489!5.55e-08!6;CL:0000898!5.55e-08!6;CL:0000809!5.55e-08!6;CL:0000810!5.55e-08!6;CL:0000895!5.55e-08!6;CL:0000808!5.55e-08!6;CL:0000894!5.55e-08!6;CL:0000806!5.55e-08!6;CL:0000807!5.55e-08!6;CL:0000805!5.55e-08!6;CL:0002425!5.55e-08!6;CL:0002436!5.55e-08!6;CL:0002427!5.55e-08!6;CL:0002428!5.55e-08!6;CL:0002429!5.55e-08!6;CL:0002433!5.55e-08!6;CL:0002431!5.55e-08!6;CL:0002432!5.55e-08!6|ontology_enrichment_celltype_v019_2=CL:0000084,1.54e-36,11;CL:0000827,1.54e-36,11;CL:0000838,2.57e-33,12;CL:0002031,3.04e-31,25;CL:0000542,1.37e-30,13;CL:0000051,1.37e-30,13;CL:0000791,2.17e-30,9;CL:0000789,2.17e-30,9;CL:0002420,2.17e-30,9;CL:0002419,2.17e-30,9;CL:0000790,2.17e-30,9;CL:0000624,3.33e-27,8;CL:0000738,5.67e-27,17;CL:0002087,5.67e-27,17;CL:0000988,8.78e-27,32;CL:0002032,8.78e-27,32;CL:0000037,8.78e-27,32;CL:0000837,8.78e-27,32;CL:0000893,7.76e-21,6;CL:0002489,7.76e-21,6;CL:0000898,7.76e-21,6;CL:0000809,7.76e-21,6;CL:0000810,7.76e-21,6;CL:0000895,7.76e-21,6;CL:0000808,7.76e-21,6;CL:0000894,7.76e-21,6;CL:0000806,7.76e-21,6;CL:0000807,7.76e-21,6;CL:0000805,7.76e-21,6;CL:0002425,7.76e-21,6;CL:0002436,7.76e-21,6;CL:0002427,7.76e-21,6;CL:0002428,7.76e-21,6;CL:0002429,7.76e-21,6;CL:0002433,7.76e-21,6;CL:0002431,7.76e-21,6;CL:0002432,7.76e-21,6;CL:0002320,1.45e-17,46;CL:0000134,1.45e-17,46;CL:0000219,1.92e-14,54;CL:0000034,1.68e-08,97;CL:0000553,1.81e-08,6;CL:0000556,1.81e-08,6;CL:0000723,3.74e-07,91;CL:0000048,3.74e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.92e-17!48;UBERON:0002390!1.29e-16!45;UBERON:0003061!1.29e-16!45;UBERON:0004177!5.64e-13!29;UBERON:0001004!2.62e-11!42;UBERON:0003408!3.23e-11!24;UBERON:0006562!3.91e-11!24;UBERON:0001557!3.91e-11!24;UBERON:0001042!3.91e-11!24;UBERON:0008814!3.91e-11!24;UBERON:0009145!3.91e-11!24;UBERON:0000065!1.10e-10!41;UBERON:0002370!1.57e-10!23;UBERON:0000974!1.57e-10!23;UBERON:0004807!1.57e-10!23;UBERON:0005058!1.57e-10!23;UBERON:0003351!1.57e-10!23;UBERON:0009113!1.57e-10!23;UBERON:0003295!1.57e-10!23;UBERON:0009722!1.57e-10!23;UBERON:0005562!1.57e-10!23;UBERON:0007690!1.57e-10!23;UBERON:0000072!3.36e-09!27;UBERON:0003081!4.47e-09!88;UBERON:0002405!6.17e-09!70;UBERON:0002384!7.88e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-18,48;UBERON:0002405,2.10e-18,48;UBERON:0002384,1.45e-17,46;UBERON:0002390,2.07e-17,45;UBERON:0003061,2.07e-17,45;UBERON:0004177,3.69e-14,29;UBERON:0005057,3.69e-14,29;UBERON:0002370,8.89e-13,23;UBERON:0000974,8.89e-13,23;UBERON:0004807,8.89e-13,23;UBERON:0005058,8.89e-13,23;UBERON:0003351,8.89e-13,23;UBERON:0009113,8.89e-13,23;UBERON:0003295,8.89e-13,23;UBERON:0009722,8.89e-13,23;UBERON:0005562,8.89e-13,23;UBERON:0007690,8.89e-13,23;UBERON:0006562,3.61e-12,24;UBERON:0003408,3.61e-12,24;UBERON:0001557,3.61e-12,24;UBERON:0001042,3.61e-12,24;UBERON:0008814,3.61e-12,24;UBERON:0009145,3.61e-12,24;UBERON:0000077,2.49e-11,35;UBERON:0000072,1.29e-10,27;UBERON:0000065,3.08e-09,41;UBERON:0001004,5.79e-09,42;UBERON:0007811,1.64e-07,36;UBERON:0003081,2.40e-07,87|phase1_expression=0,0,0,0,0,0,0,17.8190186349375,4.78681655315667,8.19225842126977,16.950578854325,11.8860516903051,26.8785145991993,26.1387003232802,0.666219523631325,1.01237633694913,0.699561878128147,2.20823515750766,4.11343300817216,1.27316895539409,0.340173160604279,3.77305614563364,7.31359409589019,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,5.80289713609076,9.41062637598899,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,13.9826457169473,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0.838705871541442,0.599902730993408,1.14363204365758,0,0,0,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0.505445516867349,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21949 | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P32972 | |||
|association_with_transcript=0bp_to_ENSMUST00000030047_5end | |||
|cluster_id=chr4:63522360..63522389,- | |||
|description=CAGE_peak_1_at_Tnfsf8_5end | |||
|id=chr4:63522360..63522389,- | |||
|ontology_enrichment_celltype=CL:0000988!5.05e-15!32;CL:0002032!5.05e-15!32;CL:0000037!5.05e-15!32;CL:0000566!5.05e-15!32;CL:0000837!5.05e-15!32;CL:0000838!2.22e-13!12;CL:0000084!3.43e-13!11;CL:0000827!3.43e-13!11;CL:0002031!4.55e-13!25;CL:0000542!5.34e-12!13;CL:0000051!5.34e-12!13;CL:0000791!3.71e-11!9;CL:0000789!3.71e-11!9;CL:0002420!3.71e-11!9;CL:0002419!3.71e-11!9;CL:0000790!3.71e-11!9;CL:0000624!4.23e-10!8;CL:0000738!9.30e-10!17;CL:0002087!9.30e-10!17;CL:0002320!7.88e-09!46;CL:0000134!7.88e-09!46;CL:0000893!5.55e-08!6;CL:0002489!5.55e-08!6;CL:0000898!5.55e-08!6;CL:0000809!5.55e-08!6;CL:0000810!5.55e-08!6;CL:0000895!5.55e-08!6;CL:0000808!5.55e-08!6;CL:0000894!5.55e-08!6;CL:0000806!5.55e-08!6;CL:0000807!5.55e-08!6;CL:0000805!5.55e-08!6;CL:0002425!5.55e-08!6;CL:0002436!5.55e-08!6;CL:0002427!5.55e-08!6;CL:0002428!5.55e-08!6;CL:0002429!5.55e-08!6;CL:0002433!5.55e-08!6;CL:0002431!5.55e-08!6;CL:0002432!5.55e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.54e-36,11;CL:0000827,1.54e-36,11;CL:0000838,2.57e-33,12;CL:0002031,3.04e-31,25;CL:0000542,1.37e-30,13;CL:0000051,1.37e-30,13;CL:0000791,2.17e-30,9;CL:0000789,2.17e-30,9;CL:0002420,2.17e-30,9;CL:0002419,2.17e-30,9;CL:0000790,2.17e-30,9;CL:0000624,3.33e-27,8;CL:0000738,5.67e-27,17;CL:0002087,5.67e-27,17;CL:0000988,8.78e-27,32;CL:0002032,8.78e-27,32;CL:0000037,8.78e-27,32;CL:0000837,8.78e-27,32;CL:0000893,7.76e-21,6;CL:0002489,7.76e-21,6;CL:0000898,7.76e-21,6;CL:0000809,7.76e-21,6;CL:0000810,7.76e-21,6;CL:0000895,7.76e-21,6;CL:0000808,7.76e-21,6;CL:0000894,7.76e-21,6;CL:0000806,7.76e-21,6;CL:0000807,7.76e-21,6;CL:0000805,7.76e-21,6;CL:0002425,7.76e-21,6;CL:0002436,7.76e-21,6;CL:0002427,7.76e-21,6;CL:0002428,7.76e-21,6;CL:0002429,7.76e-21,6;CL:0002433,7.76e-21,6;CL:0002431,7.76e-21,6;CL:0002432,7.76e-21,6;CL:0002320,1.45e-17,46;CL:0000134,1.45e-17,46;CL:0000219,1.92e-14,54;CL:0000034,1.68e-08,97;CL:0000553,1.81e-08,6;CL:0000556,1.81e-08,6;CL:0000723,3.74e-07,91;CL:0000048,3.74e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.92e-17!48;UBERON:0002390!1.29e-16!45;UBERON:0003061!1.29e-16!45;UBERON:0004177!5.64e-13!29;UBERON:0001004!2.62e-11!42;UBERON:0003408!3.23e-11!24;UBERON:0006562!3.91e-11!24;UBERON:0001557!3.91e-11!24;UBERON:0001042!3.91e-11!24;UBERON:0008814!3.91e-11!24;UBERON:0009145!3.91e-11!24;UBERON:0000065!1.10e-10!41;UBERON:0002370!1.57e-10!23;UBERON:0000974!1.57e-10!23;UBERON:0004807!1.57e-10!23;UBERON:0005058!1.57e-10!23;UBERON:0003351!1.57e-10!23;UBERON:0009113!1.57e-10!23;UBERON:0003295!1.57e-10!23;UBERON:0009722!1.57e-10!23;UBERON:0005562!1.57e-10!23;UBERON:0007690!1.57e-10!23;UBERON:0000072!3.36e-09!27;UBERON:0003081!4.47e-09!88;UBERON:0002405!6.17e-09!70;UBERON:0002384!7.88e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-18,48;UBERON:0002405,2.10e-18,48;UBERON:0002384,1.45e-17,46;UBERON:0002390,2.07e-17,45;UBERON:0003061,2.07e-17,45;UBERON:0004177,3.69e-14,29;UBERON:0005057,3.69e-14,29;UBERON:0002370,8.89e-13,23;UBERON:0000974,8.89e-13,23;UBERON:0004807,8.89e-13,23;UBERON:0005058,8.89e-13,23;UBERON:0003351,8.89e-13,23;UBERON:0009113,8.89e-13,23;UBERON:0003295,8.89e-13,23;UBERON:0009722,8.89e-13,23;UBERON:0005562,8.89e-13,23;UBERON:0007690,8.89e-13,23;UBERON:0006562,3.61e-12,24;UBERON:0003408,3.61e-12,24;UBERON:0001557,3.61e-12,24;UBERON:0001042,3.61e-12,24;UBERON:0008814,3.61e-12,24;UBERON:0009145,3.61e-12,24;UBERON:0000077,2.49e-11,35;UBERON:0000072,1.29e-10,27;UBERON:0000065,3.08e-09,41;UBERON:0001004,5.79e-09,42;UBERON:0007811,1.64e-07,36;UBERON:0003081,2.40e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,17.8190186349375,4.78681655315667,8.19225842126977,16.950578854325,11.8860516903051,26.8785145991993,26.1387003232802,0.666219523631325,1.01237633694913,0.699561878128147,2.20823515750766,4.11343300817216,1.27316895539409,0.340173160604279,3.77305614563364,7.31359409589019,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,5.80289713609076,9.41062637598899,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,13.9826457169473,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0.838705871541442,0.599902730993408,1.14363204365758,0,0,0,0.173824320192276,0,0.41557608911912,0,0,0.248813941220186,0.505445516867349,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,1.66277871149944,0,0,0,0,0.167506257441816,0,0,0.472905432318573,0.44292937929755,0.159454768657487,0.81931657357869,1.03610989119537,0.578596234326046,0,1.08781136763742,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.32977250588296,0,0.180938774784468,0,0.164140899745061,0,0.18542530201051,2.39219233116994,0,0.185194527369712,0.188368457004691,1.36694227721025,0.457556346413045,0.339956859987711,1.39951452323658,1.10559979043539,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.410843828659309,0.129920822977795,0.179026695667481,0,1.08175904567972,0.147689527174577,0.807731599585181,0.381034033274999,0.201652370273681,0.974578807397524,1.05833025804362,1.98690733708667,0.453460767230423,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@Tnfsf8 | |||
}} |
Revision as of 16:53, 5 August 2015
Short description: | p1@Tnfsf8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfsf8_5end |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | 0bp_to_ENSMUST00000030047_5end |
EntrezGene: | 21949 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.10e-18 | 48 |
immune system | 2.10e-18 | 48 |
connective tissue | 1.45e-17 | 46 |
hematopoietic system | 2.07e-17 | 45 |
blood island | 2.07e-17 | 45 |
hemopoietic organ | 3.69e-14 | 29 |
immune organ | 3.69e-14 | 29 |
thymus | 8.89e-13 | 23 |
neck | 8.89e-13 | 23 |
respiratory system epithelium | 8.89e-13 | 23 |
hemolymphoid system gland | 8.89e-13 | 23 |
pharyngeal epithelium | 8.89e-13 | 23 |
thymic region | 8.89e-13 | 23 |
pharyngeal gland | 8.89e-13 | 23 |
entire pharyngeal arch endoderm | 8.89e-13 | 23 |
thymus primordium | 8.89e-13 | 23 |
early pharyngeal endoderm | 8.89e-13 | 23 |
pharynx | 3.61e-12 | 24 |
gland of gut | 3.61e-12 | 24 |
upper respiratory tract | 3.61e-12 | 24 |
chordate pharynx | 3.61e-12 | 24 |
pharyngeal arch system | 3.61e-12 | 24 |
pharyngeal region of foregut | 3.61e-12 | 24 |
mixed endoderm/mesoderm-derived structure | 2.49e-11 | 35 |
segment of respiratory tract | 1.29e-10 | 27 |
respiratory tract | 3.08e-09 | 41 |
respiratory system | 5.79e-09 | 42 |
craniocervical region | 1.64e-07 | 36 |
lateral plate mesoderm | 2.40e-07 | 87 |