FFCP PHASE1:Mm9::chr15:84388017..84388069,-: Difference between revisions
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{{FFCP|EntrezGene=223732|HGNC=|MCL_coexpression_id=13|UniProt=Q505G4|association_with_transcript=-95bp_to_ENSMUST00000069476_5end|description=CAGE_peak_2_at_Ldoc1l_5end|id=chr15:84388017..84388069,-|ontology_enrichment_celltype=CL:0000117!3.67e-14!23;CL:0000337!3.67e-14!23;CL:0000221!2.65e-13!44;CL:0000133!2.65e-13!44;CL:0002319!5.86e-13!43;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33;CL:0000055!3.36e-09!50;CL:0000393!2.93e-07!39;CL:0000211!2.93e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-14,23;CL:0000337,1.72e-14,23;CL:0000221,3.56e-13,44;CL:0000133,3.56e-13,44;CL:0002319,8.00e-13,43;CL:0000540,3.79e-10,33;CL:0000047,3.79e-10,33;CL:0000031,3.79e-10,33;CL:0000404,3.79e-10,33;CL:0000393,1.48e-07,39;CL:0000211,1.48e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.43e-31!73;UBERON:0005743!5.43e-31!73;UBERON:0000073!2.92e-30!75;UBERON:0001016!2.92e-30!75;UBERON:0001049!2.50e-28!52;UBERON:0005068!2.50e-28!52;UBERON:0006241!2.50e-28!52;UBERON:0007135!2.50e-28!52;UBERON:0002346!1.06e-27!71;UBERON:0003075!1.06e-27!71;UBERON:0007284!1.06e-27!71;UBERON:0000033!3.42e-27!63;UBERON:0000955!5.34e-27!50;UBERON:0006238!5.34e-27!50;UBERON:0002616!2.01e-26!49;UBERON:0004121!3.45e-26!102;UBERON:0000924!3.45e-26!102;UBERON:0006601!3.45e-26!102;UBERON:0003056!7.38e-23!49;UBERON:0003080!4.03e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002020!4.59e-20!34;UBERON:0000153!1.95e-18!94;UBERON:0007811!4.00e-17!86;UBERON:0002791!8.97e-17!29;UBERON:0003528!8.97e-17!29;UBERON:0001893!8.97e-17!29;UBERON:0000956!5.34e-12!21;UBERON:0001869!5.34e-12!21;UBERON:0000203!5.34e-12!21;UBERON:0002619!2.33e-10!17;UBERON:0000468!1.95e-08!333;UBERON:0000025!8.63e-08!114;UBERON:0004111!2.48e-07!122;UBERON:0002021!2.96e-07!10;UBERON:0000411!2.96e-07!10;UBERON:0001950!2.96e-07!10;UBERON:0000922!9.88e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-31,73;UBERON:0000073,9.22e-31,54;UBERON:0001016,1.82e-30,75;UBERON:0002346,1.50e-29,64;UBERON:0003075,1.50e-29,64;UBERON:0007284,1.50e-29,64;UBERON:0001049,4.97e-29,52;UBERON:0005068,4.97e-29,52;UBERON:0006241,4.97e-29,52;UBERON:0007135,4.97e-29,52;UBERON:0010314,1.88e-26,92;UBERON:0004121,9.27e-26,95;UBERON:0000924,9.27e-26,95;UBERON:0006601,9.27e-26,95;UBERON:0000955,1.30e-25,47;UBERON:0006238,1.30e-25,47;UBERON:0002616,4.95e-25,46;UBERON:0010371,1.20e-24,73;UBERON:0003056,2.04e-23,49;UBERON:0003080,1.16e-22,40;UBERON:0002780,4.18e-22,39;UBERON:0001890,4.18e-22,39;UBERON:0006240,4.18e-22,39;UBERON:0002020,1.50e-20,34;UBERON:0003528,3.59e-17,29;UBERON:0002791,3.59e-17,29;UBERON:0001893,3.59e-17,29;UBERON:0000956,2.85e-12,21;UBERON:0001869,2.85e-12,21;UBERON:0000203,2.85e-12,21;UBERON:0002619,1.37e-10,17;UBERON:0000025,1.36e-08,114;UBERON:0004111,7.83e-08,122;UBERON:0002021,2.10e-07,10;UBERON:0000411,2.10e-07,10;UBERON:0001950,2.10e-07,10;UBERON:0003076,7.91e-07,12;UBERON:0003057,7.91e-07,12|phase1_expression=3.20297694209588,0,0,0,0,0,0,1.16210991097419,0,0,0,0,1.19840510951844,0.961624426608971,1.33243904726265,0.809901069559304,0.699561878128147,5.0473946457318,5.21034847701807,5.09267582157636,3.48677489619386,0,0,0.47997726838022,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,7.82391344348039,6.97680500417429,8.12838876117546,6.02732687130279,5.5994568650145,12.9377307928474,1.51004345451963,0,0.672187598284928,1.80081605225163,2.57880095944881,1.54701627683233,13.7575193384526,15.869729378161,13.9442908771359,2.37191172448392,8.00365316500025,2.2497492932035,0.988866362566974,4.2628806896766,5.39280198933128,4.99483796918021,4.45865332926454,6.61529097825284,5.25812403378455,16.8534080798244,12.8103753751936,5.26710436624302,10.0637744569148,11.0306254393203,9.91042928994498,15.7055425844781,13.6709814598057,13.1886287730194,18.754966938494,14.0646610050325,12.2840519560608,14.6318278608237,14.515833538797,14.7314292736834,11.2473627831291,17.5215479075783,0.832988126665025,2.64500460373749,0,0,0,0,0,0,1.12355536105401,0,0,0,4.92951969218382,0,0,0,0,0.506719730950197,0,0.79928715803342,8.02707439306232,2.82040064223167,2.25530924795977,0.608930956624282,2.07553947530453,2.56228488939458,2.23418543557839,2.63899841792318,0.988779870937496,0.433798070759735,0.884610551949874,1.45590164952668,0.883366073841574,0.484875253135222,1.86391761218122,4.39171195517321,2.93225389538837,0.255457055208591,0.479260498023681,0,0.508280908292259,9.58660092190865,8.23501085073528,7.91622418311046,14.0797699355744,11.7629110371952,12.0517065844545,9.73447578406546,1.93494791315601,1.99051152976149,5.55990068554084,2.10441855886474,3.6433724029557,1.14951052216736,3.78130472591233,3.31550599238573,4.01415344992834,4.09963904911519,4.2165776051878,4.39795730256327,3.44908788692548,3.78212160335639,3.87092473160687,4.3839146485515,2.50242524303038,1.39300866608867,1.64625709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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223732 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q505G4 | |||
|association_with_transcript=-95bp_to_ENSMUST00000069476_5end | |||
|cluster_id=chr15:84388017..84388069,- | |||
|description=CAGE_peak_2_at_Ldoc1l_5end | |||
|id=chr15:84388017..84388069,- | |||
|ontology_enrichment_celltype=CL:0000117!3.67e-14!23;CL:0000337!3.67e-14!23;CL:0000221!2.65e-13!44;CL:0000133!2.65e-13!44;CL:0002319!5.86e-13!43;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33;CL:0000055!3.36e-09!50;CL:0000393!2.93e-07!39;CL:0000211!2.93e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-14,23;CL:0000337,1.72e-14,23;CL:0000221,3.56e-13,44;CL:0000133,3.56e-13,44;CL:0002319,8.00e-13,43;CL:0000540,3.79e-10,33;CL:0000047,3.79e-10,33;CL:0000031,3.79e-10,33;CL:0000404,3.79e-10,33;CL:0000393,1.48e-07,39;CL:0000211,1.48e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.43e-31!73;UBERON:0005743!5.43e-31!73;UBERON:0000073!2.92e-30!75;UBERON:0001016!2.92e-30!75;UBERON:0001049!2.50e-28!52;UBERON:0005068!2.50e-28!52;UBERON:0006241!2.50e-28!52;UBERON:0007135!2.50e-28!52;UBERON:0002346!1.06e-27!71;UBERON:0003075!1.06e-27!71;UBERON:0007284!1.06e-27!71;UBERON:0000033!3.42e-27!63;UBERON:0000955!5.34e-27!50;UBERON:0006238!5.34e-27!50;UBERON:0002616!2.01e-26!49;UBERON:0004121!3.45e-26!102;UBERON:0000924!3.45e-26!102;UBERON:0006601!3.45e-26!102;UBERON:0003056!7.38e-23!49;UBERON:0003080!4.03e-22!40;UBERON:0002780!1.40e-21!39;UBERON:0001890!1.40e-21!39;UBERON:0006240!1.40e-21!39;UBERON:0002020!4.59e-20!34;UBERON:0000153!1.95e-18!94;UBERON:0007811!4.00e-17!86;UBERON:0002791!8.97e-17!29;UBERON:0003528!8.97e-17!29;UBERON:0001893!8.97e-17!29;UBERON:0000956!5.34e-12!21;UBERON:0001869!5.34e-12!21;UBERON:0000203!5.34e-12!21;UBERON:0002619!2.33e-10!17;UBERON:0000468!1.95e-08!333;UBERON:0000025!8.63e-08!114;UBERON:0004111!2.48e-07!122;UBERON:0002021!2.96e-07!10;UBERON:0000411!2.96e-07!10;UBERON:0001950!2.96e-07!10;UBERON:0000922!9.88e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.81e-31,73;UBERON:0000073,9.22e-31,54;UBERON:0001016,1.82e-30,75;UBERON:0002346,1.50e-29,64;UBERON:0003075,1.50e-29,64;UBERON:0007284,1.50e-29,64;UBERON:0001049,4.97e-29,52;UBERON:0005068,4.97e-29,52;UBERON:0006241,4.97e-29,52;UBERON:0007135,4.97e-29,52;UBERON:0010314,1.88e-26,92;UBERON:0004121,9.27e-26,95;UBERON:0000924,9.27e-26,95;UBERON:0006601,9.27e-26,95;UBERON:0000955,1.30e-25,47;UBERON:0006238,1.30e-25,47;UBERON:0002616,4.95e-25,46;UBERON:0010371,1.20e-24,73;UBERON:0003056,2.04e-23,49;UBERON:0003080,1.16e-22,40;UBERON:0002780,4.18e-22,39;UBERON:0001890,4.18e-22,39;UBERON:0006240,4.18e-22,39;UBERON:0002020,1.50e-20,34;UBERON:0003528,3.59e-17,29;UBERON:0002791,3.59e-17,29;UBERON:0001893,3.59e-17,29;UBERON:0000956,2.85e-12,21;UBERON:0001869,2.85e-12,21;UBERON:0000203,2.85e-12,21;UBERON:0002619,1.37e-10,17;UBERON:0000025,1.36e-08,114;UBERON:0004111,7.83e-08,122;UBERON:0002021,2.10e-07,10;UBERON:0000411,2.10e-07,10;UBERON:0001950,2.10e-07,10;UBERON:0003076,7.91e-07,12;UBERON:0003057,7.91e-07,12 | |||
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| |||
|short_description=p2@Ldoc1l | |||
}} |
Revision as of 18:39, 5 August 2015
Short description: | p2@Ldoc1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ldoc1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -95bp_to_ENSMUST00000069476_5end |
EntrezGene: | 223732 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-14 | 23 |
ectodermal cell | 3.56e-13 | 44 |
neurectodermal cell | 3.56e-13 | 44 |
neural cell | 8.00e-13 | 43 |
neuron | 3.79e-10 | 33 |
neuronal stem cell | 3.79e-10 | 33 |
neuroblast | 3.79e-10 | 33 |
electrically signaling cell | 3.79e-10 | 33 |
electrically responsive cell | 1.48e-07 | 39 |
electrically active cell | 1.48e-07 | 39 |