FFCP PHASE1:Mm9::chr6:50604437..50604447,-: Difference between revisions
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{{FFCP|EntrezGene=60531|HGNC=|MCL_coexpression_id=1541|UniProt=Q9ESQ8|association_with_transcript=0bp_to_ENSMUST00000031853_5end|description=CAGE_peak_1_at_Npvf_5end|id=chr6:50604437..50604447,-|ontology_enrichment_celltype=CL:0002319!3.99e-11!43;CL:0000333!4.63e-11!10;CL:0000095!4.63e-11!10;CL:0000243!4.63e-11!10;CL:0000123!4.63e-11!10;CL:0000125!4.63e-11!10;CL:0000030!4.63e-11!10;CL:0000339!4.63e-11!10;CL:0000221!8.70e-11!44;CL:0000133!8.70e-11!44;CL:0002453!8.87e-11!8;CL:0000055!4.80e-09!50;CL:0002613!8.87e-09!3;CL:0002614!9.40e-09!3;CL:0000117!2.73e-07!23;CL:0000337!2.73e-07!23;CL:0000128!8.56e-07!6;CL:0000126!8.56e-07!6;CL:0000127!8.56e-07!6|ontology_enrichment_celltype_v019_2=CL:0002613,8.94e-30,3;CL:0002614,1.99e-14,3;CL:0002319,2.29e-14,43;CL:0000221,4.90e-14,44;CL:0000133,4.90e-14,44;CL:0002453,1.60e-11,8;CL:0000117,6.48e-11,23;CL:0000337,6.48e-11,23;CL:0000333,2.40e-09,10;CL:0000095,2.40e-09,10;CL:0000243,2.40e-09,10;CL:0000123,2.40e-09,10;CL:0000125,2.40e-09,10;CL:0000030,2.40e-09,10;CL:0000339,2.40e-09,10;CL:0002321,1.01e-08,70;CL:0000540,1.23e-07,33;CL:0000047,1.23e-07,33;CL:0000031,1.23e-07,33;CL:0000404,1.23e-07,33;CL:0000128,1.89e-07,6;CL:0000126,1.89e-07,6;CL:0000127,1.89e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.33e-12!49;UBERON:0002420!1.02e-11!8;UBERON:0007245!1.02e-11!8;UBERON:0010009!1.02e-11!8;UBERON:0010011!1.02e-11!8;UBERON:0000454!1.02e-11!8;UBERON:0002950!4.87e-11!4;UBERON:0001891!4.87e-11!4;UBERON:0009616!4.87e-11!4;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000033!6.13e-10!63;UBERON:0004121!2.57e-09!102;UBERON:0000924!2.57e-09!102;UBERON:0006601!2.57e-09!102;UBERON:0000970!4.96e-09!9;UBERON:0000019!4.96e-09!9;UBERON:0000047!4.96e-09!9;UBERON:0004088!4.96e-09!9;UBERON:0002104!4.96e-09!9;UBERON:0001456!4.96e-09!9;UBERON:0003072!4.96e-09!9;UBERON:0003071!4.96e-09!9;UBERON:0004128!4.96e-09!9;UBERON:0002038!9.40e-09!3;UBERON:0002308!9.40e-09!3;UBERON:0009663!9.40e-09!3;UBERON:0009661!9.40e-09!3;UBERON:0006331!9.40e-09!3;UBERON:0000125!9.40e-09!3;UBERON:0007811!8.91e-08!86;UBERON:0001049!1.61e-07!52;UBERON:0005068!1.61e-07!52;UBERON:0006241!1.61e-07!52;UBERON:0007135!1.61e-07!52;UBERON:0000073!1.72e-07!75;UBERON:0001016!1.72e-07!75;UBERON:0002298!2.54e-07!6;UBERON:0001444!2.94e-07!11;UBERON:0001017!6.36e-07!73;UBERON:0005743!6.36e-07!73;UBERON:0002020!8.81e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002420,6.20e-31,8;UBERON:0007245,6.20e-31,8;UBERON:0010009,6.20e-31,8;UBERON:0010011,6.20e-31,8;UBERON:0000454,6.20e-31,8;UBERON:0002950,9.27e-23,4;UBERON:0001891,9.27e-23,4;UBERON:0009616,9.27e-23,4;UBERON:0010286,9.27e-23,4;UBERON:0000369,3.46e-18,5;UBERON:0002435,3.46e-18,5;UBERON:0000204,3.46e-18,5;UBERON:0010082,3.46e-18,5;UBERON:0002038,1.99e-14,3;UBERON:0009663,1.99e-14,3;UBERON:0009661,1.99e-14,3;UBERON:0000125,1.99e-14,3;UBERON:0002308,1.99e-14,3;UBERON:0002616,2.12e-13,46;UBERON:0000955,4.14e-13,47;UBERON:0006238,4.14e-13,47;UBERON:0003528,2.94e-12,29;UBERON:0002791,2.94e-12,29;UBERON:0001893,2.94e-12,29;UBERON:0003080,7.11e-12,40;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,2.23e-11,54;UBERON:0002259,1.12e-10,1;UBERON:0002314,1.12e-10,1;UBERON:0004061,1.12e-10,1;UBERON:0006777,1.12e-10,1;UBERON:0005882,1.12e-10,1;UBERON:0001017,1.45e-10,73;UBERON:0002020,1.89e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0003056,1.17e-09,49;UBERON:0002346,1.48e-09,64;UBERON:0003075,1.48e-09,64;UBERON:0007284,1.48e-09,64;UBERON:0002780,4.22e-09,39;UBERON:0001890,4.22e-09,39;UBERON:0006240,4.22e-09,39;UBERON:0010371,2.45e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.75748946187577,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,1.45074916503213,1.64677758484337,3.64639359389732,0.558365998002762,20.8222165711722,5.04234217663473,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0,0,0,0,0,0.631325567659422,0.260240885925407,0.689706313300419,0,0.452114453507145,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Npvf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:60531 | |||
|HGNC= | |||
|MCL_coexpression_id=1541 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ESQ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000031853_5end | |||
|cluster_id=chr6:50604437..50604447,- | |||
|description=CAGE_peak_1_at_Npvf_5end | |||
|id=chr6:50604437..50604447,- | |||
|ontology_enrichment_celltype=CL:0002319!3.99e-11!43;CL:0000333!4.63e-11!10;CL:0000095!4.63e-11!10;CL:0000243!4.63e-11!10;CL:0000123!4.63e-11!10;CL:0000125!4.63e-11!10;CL:0000030!4.63e-11!10;CL:0000339!4.63e-11!10;CL:0000221!8.70e-11!44;CL:0000133!8.70e-11!44;CL:0002453!8.87e-11!8;CL:0000055!4.80e-09!50;CL:0002613!8.87e-09!3;CL:0002614!9.40e-09!3;CL:0000117!2.73e-07!23;CL:0000337!2.73e-07!23;CL:0000128!8.56e-07!6;CL:0000126!8.56e-07!6;CL:0000127!8.56e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,8.94e-30,3;CL:0002614,1.99e-14,3;CL:0002319,2.29e-14,43;CL:0000221,4.90e-14,44;CL:0000133,4.90e-14,44;CL:0002453,1.60e-11,8;CL:0000117,6.48e-11,23;CL:0000337,6.48e-11,23;CL:0000333,2.40e-09,10;CL:0000095,2.40e-09,10;CL:0000243,2.40e-09,10;CL:0000123,2.40e-09,10;CL:0000125,2.40e-09,10;CL:0000030,2.40e-09,10;CL:0000339,2.40e-09,10;CL:0002321,1.01e-08,70;CL:0000540,1.23e-07,33;CL:0000047,1.23e-07,33;CL:0000031,1.23e-07,33;CL:0000404,1.23e-07,33;CL:0000128,1.89e-07,6;CL:0000126,1.89e-07,6;CL:0000127,1.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.33e-12!49;UBERON:0002420!1.02e-11!8;UBERON:0007245!1.02e-11!8;UBERON:0010009!1.02e-11!8;UBERON:0010011!1.02e-11!8;UBERON:0000454!1.02e-11!8;UBERON:0002950!4.87e-11!4;UBERON:0001891!4.87e-11!4;UBERON:0009616!4.87e-11!4;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000033!6.13e-10!63;UBERON:0004121!2.57e-09!102;UBERON:0000924!2.57e-09!102;UBERON:0006601!2.57e-09!102;UBERON:0000970!4.96e-09!9;UBERON:0000019!4.96e-09!9;UBERON:0000047!4.96e-09!9;UBERON:0004088!4.96e-09!9;UBERON:0002104!4.96e-09!9;UBERON:0001456!4.96e-09!9;UBERON:0003072!4.96e-09!9;UBERON:0003071!4.96e-09!9;UBERON:0004128!4.96e-09!9;UBERON:0002038!9.40e-09!3;UBERON:0002308!9.40e-09!3;UBERON:0009663!9.40e-09!3;UBERON:0009661!9.40e-09!3;UBERON:0006331!9.40e-09!3;UBERON:0000125!9.40e-09!3;UBERON:0007811!8.91e-08!86;UBERON:0001049!1.61e-07!52;UBERON:0005068!1.61e-07!52;UBERON:0006241!1.61e-07!52;UBERON:0007135!1.61e-07!52;UBERON:0000073!1.72e-07!75;UBERON:0001016!1.72e-07!75;UBERON:0002298!2.54e-07!6;UBERON:0001444!2.94e-07!11;UBERON:0001017!6.36e-07!73;UBERON:0005743!6.36e-07!73;UBERON:0002020!8.81e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,6.20e-31,8;UBERON:0007245,6.20e-31,8;UBERON:0010009,6.20e-31,8;UBERON:0010011,6.20e-31,8;UBERON:0000454,6.20e-31,8;UBERON:0002950,9.27e-23,4;UBERON:0001891,9.27e-23,4;UBERON:0009616,9.27e-23,4;UBERON:0010286,9.27e-23,4;UBERON:0000369,3.46e-18,5;UBERON:0002435,3.46e-18,5;UBERON:0000204,3.46e-18,5;UBERON:0010082,3.46e-18,5;UBERON:0002038,1.99e-14,3;UBERON:0009663,1.99e-14,3;UBERON:0009661,1.99e-14,3;UBERON:0000125,1.99e-14,3;UBERON:0002308,1.99e-14,3;UBERON:0002616,2.12e-13,46;UBERON:0000955,4.14e-13,47;UBERON:0006238,4.14e-13,47;UBERON:0003528,2.94e-12,29;UBERON:0002791,2.94e-12,29;UBERON:0001893,2.94e-12,29;UBERON:0003080,7.11e-12,40;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,2.23e-11,54;UBERON:0002259,1.12e-10,1;UBERON:0002314,1.12e-10,1;UBERON:0004061,1.12e-10,1;UBERON:0006777,1.12e-10,1;UBERON:0005882,1.12e-10,1;UBERON:0001017,1.45e-10,73;UBERON:0002020,1.89e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0003056,1.17e-09,49;UBERON:0002346,1.48e-09,64;UBERON:0003075,1.48e-09,64;UBERON:0007284,1.48e-09,64;UBERON:0002780,4.22e-09,39;UBERON:0001890,4.22e-09,39;UBERON:0006240,4.22e-09,39;UBERON:0010371,2.45e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.75748946187577,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,1.45074916503213,1.64677758484337,3.64639359389732,0.558365998002762,20.8222165711722,5.04234217663473,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0,0,0,0,0,0.631325567659422,0.260240885925407,0.689706313300419,0,0.452114453507145,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Npvf | |||
}} |
Revision as of 21:52, 5 August 2015
Short description: | p1@Npvf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Npvf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1541 |
Association with transcript: | 0bp_to_ENSMUST00000031853_5end |
EntrezGene: | 60531 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 8.94e-30 | 3 |
neuron of the substantia nigra | 1.99e-14 | 3 |
neural cell | 2.29e-14 | 43 |
ectodermal cell | 4.90e-14 | 44 |
neurectodermal cell | 4.90e-14 | 44 |
oligodendrocyte precursor cell | 1.60e-11 | 8 |
CNS neuron (sensu Vertebrata) | 6.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.48e-11 | 23 |
migratory neural crest cell | 2.40e-09 | 10 |
neuron associated cell | 2.40e-09 | 10 |
glial cell (sensu Vertebrata) | 2.40e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.40e-09 | 10 |
glial cell | 2.40e-09 | 10 |
glioblast | 2.40e-09 | 10 |
glioblast (sensu Vertebrata) | 2.40e-09 | 10 |
embryonic cell | 1.01e-08 | 70 |
neuron | 1.23e-07 | 33 |
neuronal stem cell | 1.23e-07 | 33 |
neuroblast | 1.23e-07 | 33 |
electrically signaling cell | 1.23e-07 | 33 |
oligodendrocyte | 1.89e-07 | 6 |
macroglial cell | 1.89e-07 | 6 |
astrocyte | 1.89e-07 | 6 |