FFCP PHASE1:Mm9::chr1:75476104..75476168,+: Difference between revisions
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{{FFCP|EntrezGene=319998|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG75,D3Z7R8|association_with_transcript=0bp_to_ENSMUST00000050899,ENSMUST00000113575,ENSMUST00000148980,NM_177056,uc007bpl.2,uc007bpm.2_5end|description=CAGE_peak_1_at_Tmem198_5end|id=chr1:75476104..75476168,+|ontology_enrichment_celltype=CL:0002319!1.25e-16!43;CL:0000221!1.46e-16!44;CL:0000133!1.46e-16!44;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000117!6.47e-14!23;CL:0000337!6.47e-14!23;CL:0000055!2.13e-12!50;CL:0000393!2.54e-12!39;CL:0000211!2.54e-12!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.68e-20,33;CL:0000047,4.68e-20,33;CL:0000031,4.68e-20,33;CL:0000404,4.68e-20,33;CL:0002319,6.24e-18,43;CL:0000221,3.63e-17,44;CL:0000133,3.63e-17,44;CL:0000117,6.29e-17,23;CL:0000337,6.29e-17,23;CL:0000393,8.02e-15,39;CL:0000211,8.02e-15,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.10e-38!73;UBERON:0005743!6.10e-38!73;UBERON:0000073!3.68e-37!75;UBERON:0001016!3.68e-37!75;UBERON:0004121!4.48e-35!102;UBERON:0000924!4.48e-35!102;UBERON:0006601!4.48e-35!102;UBERON:0002346!2.21e-33!71;UBERON:0003075!2.21e-33!71;UBERON:0007284!2.21e-33!71;UBERON:0000033!5.78e-29!63;UBERON:0001049!1.35e-28!52;UBERON:0005068!1.35e-28!52;UBERON:0006241!1.35e-28!52;UBERON:0007135!1.35e-28!52;UBERON:0000955!1.48e-27!50;UBERON:0006238!1.48e-27!50;UBERON:0002616!8.03e-27!49;UBERON:0003056!1.02e-24!49;UBERON:0003080!2.85e-22!40;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0002020!2.00e-20!34;UBERON:0002791!1.40e-17!29;UBERON:0003528!1.40e-17!29;UBERON:0001893!1.40e-17!29;UBERON:0007811!2.86e-15!86;UBERON:0000956!6.65e-13!21;UBERON:0001869!6.65e-13!21;UBERON:0000203!6.65e-13!21;UBERON:0000153!7.47e-12!94;UBERON:0002619!1.15e-10!17;UBERON:0002021!1.48e-08!10;UBERON:0000411!1.48e-08!10;UBERON:0001950!1.48e-08!10;UBERON:0003076!8.57e-07!12;UBERON:0003057!8.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.46e-45,73;UBERON:0001016,5.97e-43,75;UBERON:0002346,9.47e-38,64;UBERON:0003075,9.47e-38,64;UBERON:0007284,9.47e-38,64;UBERON:0004121,4.06e-37,95;UBERON:0000924,4.06e-37,95;UBERON:0006601,4.06e-37,95;UBERON:0000073,4.81e-35,54;UBERON:0001049,2.31e-33,52;UBERON:0005068,2.31e-33,52;UBERON:0006241,2.31e-33,52;UBERON:0007135,2.31e-33,52;UBERON:0010371,8.73e-31,73;UBERON:0000955,9.09e-30,47;UBERON:0006238,9.09e-30,47;UBERON:0002616,7.04e-29,46;UBERON:0003056,6.03e-28,49;UBERON:0003080,1.60e-25,40;UBERON:0002780,8.62e-25,39;UBERON:0001890,8.62e-25,39;UBERON:0006240,8.62e-25,39;UBERON:0010314,6.54e-24,92;UBERON:0002020,3.56e-23,34;UBERON:0003528,1.18e-19,29;UBERON:0002791,1.18e-19,29;UBERON:0001893,1.18e-19,29;UBERON:0000956,6.92e-14,21;UBERON:0001869,6.92e-14,21;UBERON:0000203,6.92e-14,21;UBERON:0002619,3.96e-11,17;UBERON:0002021,2.91e-10,10;UBERON:0000411,2.91e-10,10;UBERON:0001950,2.91e-10,10;UBERON:0003076,4.47e-08,12;UBERON:0003057,4.47e-08,12;UBERON:0002420,5.69e-07,8;UBERON:0007245,5.69e-07,8;UBERON:0010009,5.69e-07,8;UBERON:0010011,5.69e-07,8;UBERON:0000454,5.69e-07,8|phase1_expression=2.40223270657191,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,7.82398269389842,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,1.56478268869608,5.01457859675027,0.878744730937887,0.777719596297134,1.1198913730029,1.43752564364972,0,0,1.00828139742739,0.257259436035947,0,0,29.1335703637821,39.6743234454025,32.3254015788151,0.338844532069132,0,0,0,0,4.79360176829448,6.14749288514487,16.9014068062819,23.8960510847092,22.7150958259493,21.7094748146891,23.6329338818226,20.4559634688973,18.2106394934649,30.3342199581307,30.8324466798288,19.5361627270337,19.3544231902867,31.1251639043257,23.4208367622169,29.1711487511786,18.9844439320939,19.1339287410771,22.9197371665215,22.0971439105251,17.938831780687,27.0279196446686,0.454357159999104,0.226714680320357,0,0,0,0,0,0,1.40444420131752,0.511290967734173,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.45673551887624,0,3.11728492036132,2.4287945747259,3.04465478312141,1.84492397804847,2.56228488939458,1.76383060703557,0.251333182659351,0.741584903203122,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,30.1564220921894,25.9713916448684,0,0.11981512450592,0,0,22.6183865501282,38.8875512395833,24.7539073662343,48.8446339740297,41.9373350021742,19.1165000994795,21.5780879880118,0.203678727700633,0,0,2.31486041475121,0.520481771850815,4.13823787980251,2.70093194708024,5.12396380641431,5.78310242786287,6.40568601424249,6.74652416830048,6.46758426847539,0,0.189106080167819,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0,0,34.9081314616451,21.5070639872704,0,0,0.213288250535234,1.16118335930219,1.28867461322093,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0.597423819763102,0,0.685491075658373,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,16.0550589987792,12.1900154055891,0,0,4.10160685241134,5.0757036758563,7.53981892064796,1.43381278771531,2.00518806674155,3.96307143104365,4.04810701674894,6.72188473196017,7.11518000303742,34.7027021735552,0.709700426041343,0.534196811001766,0.162886959353576,0,2.65490276679926,1.21390318077491,2.11626489875326,0.565815239267694,2.06711325016541,1.53717573971964,1.03371317267288,1.81766864738753,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,24.5116516142727,2.70091641046965,5.30370603509293,4.50107773566344,6.38424841112185,6.0645397984704,4.77192159746151,10.656273219011,0,1.69465656691056,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,17.0591277849669,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.474503990371703,1.01659733563424,0.756037385752609,0.836353184057875,0.87345025498471,0.674321731924103,0.826534557253359,0.26175594198403,0,0.621339313086926,0,1.64468200648377,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.821500670520278,0.5208175393758,0.629156066554265,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,56.4751842617067,55.2390283808612,71.6119391799246,73.2094556784109,73.9889121352294,80.0717531233083,57.3769125197035,67.9985016868573,68.8776461655991,71.4509230217512,1.764384908931,4.78829848081237,5.80494259564056,5.34834777550247,3.77303692730368,3.8607136774503,3.33370091702423,3.29656091582231,2.24643446714271,4.29585259998456,2.78827229879264,3.01802146217722,3.46473577638565,2.68905640100451,3.56099907524802,3.33405583898152,3.59241410429052,2.12200142510076,4.12085900803307,2.79677948255355,3.08582327146874,3.37204031702741,2.86123427936785,3.77900683244054,2.91739079287525,2.96151127620868,2.56099162021882,2.36762740294059,2.17286582153379,2.24456908663095,2.60997039873183,2.85662998889134,2.86461730218783,2.94379998253335,3.66522560864169,13.4897712086491,2.33931608445408,3.86767897286937,1.53030665655075,1.10295709559758,0.463735671240843|short_description=p1@Tmem198}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319998 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG75,uniprot:D3Z7R8 | |||
|association_with_transcript=0bp_to_ENSMUST00000050899,ENSMUST00000113575,ENSMUST00000148980,NM_177056,uc007bpl.2,uc007bpm.2_5end | |||
|cluster_id=chr1:75476104..75476168,+ | |||
|description=CAGE_peak_1_at_Tmem198_5end | |||
|id=chr1:75476104..75476168,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.25e-16!43;CL:0000221!1.46e-16!44;CL:0000133!1.46e-16!44;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000117!6.47e-14!23;CL:0000337!6.47e-14!23;CL:0000055!2.13e-12!50;CL:0000393!2.54e-12!39;CL:0000211!2.54e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.68e-20,33;CL:0000047,4.68e-20,33;CL:0000031,4.68e-20,33;CL:0000404,4.68e-20,33;CL:0002319,6.24e-18,43;CL:0000221,3.63e-17,44;CL:0000133,3.63e-17,44;CL:0000117,6.29e-17,23;CL:0000337,6.29e-17,23;CL:0000393,8.02e-15,39;CL:0000211,8.02e-15,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.10e-38!73;UBERON:0005743!6.10e-38!73;UBERON:0000073!3.68e-37!75;UBERON:0001016!3.68e-37!75;UBERON:0004121!4.48e-35!102;UBERON:0000924!4.48e-35!102;UBERON:0006601!4.48e-35!102;UBERON:0002346!2.21e-33!71;UBERON:0003075!2.21e-33!71;UBERON:0007284!2.21e-33!71;UBERON:0000033!5.78e-29!63;UBERON:0001049!1.35e-28!52;UBERON:0005068!1.35e-28!52;UBERON:0006241!1.35e-28!52;UBERON:0007135!1.35e-28!52;UBERON:0000955!1.48e-27!50;UBERON:0006238!1.48e-27!50;UBERON:0002616!8.03e-27!49;UBERON:0003056!1.02e-24!49;UBERON:0003080!2.85e-22!40;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0002020!2.00e-20!34;UBERON:0002791!1.40e-17!29;UBERON:0003528!1.40e-17!29;UBERON:0001893!1.40e-17!29;UBERON:0007811!2.86e-15!86;UBERON:0000956!6.65e-13!21;UBERON:0001869!6.65e-13!21;UBERON:0000203!6.65e-13!21;UBERON:0000153!7.47e-12!94;UBERON:0002619!1.15e-10!17;UBERON:0002021!1.48e-08!10;UBERON:0000411!1.48e-08!10;UBERON:0001950!1.48e-08!10;UBERON:0003076!8.57e-07!12;UBERON:0003057!8.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.46e-45,73;UBERON:0001016,5.97e-43,75;UBERON:0002346,9.47e-38,64;UBERON:0003075,9.47e-38,64;UBERON:0007284,9.47e-38,64;UBERON:0004121,4.06e-37,95;UBERON:0000924,4.06e-37,95;UBERON:0006601,4.06e-37,95;UBERON:0000073,4.81e-35,54;UBERON:0001049,2.31e-33,52;UBERON:0005068,2.31e-33,52;UBERON:0006241,2.31e-33,52;UBERON:0007135,2.31e-33,52;UBERON:0010371,8.73e-31,73;UBERON:0000955,9.09e-30,47;UBERON:0006238,9.09e-30,47;UBERON:0002616,7.04e-29,46;UBERON:0003056,6.03e-28,49;UBERON:0003080,1.60e-25,40;UBERON:0002780,8.62e-25,39;UBERON:0001890,8.62e-25,39;UBERON:0006240,8.62e-25,39;UBERON:0010314,6.54e-24,92;UBERON:0002020,3.56e-23,34;UBERON:0003528,1.18e-19,29;UBERON:0002791,1.18e-19,29;UBERON:0001893,1.18e-19,29;UBERON:0000956,6.92e-14,21;UBERON:0001869,6.92e-14,21;UBERON:0000203,6.92e-14,21;UBERON:0002619,3.96e-11,17;UBERON:0002021,2.91e-10,10;UBERON:0000411,2.91e-10,10;UBERON:0001950,2.91e-10,10;UBERON:0003076,4.47e-08,12;UBERON:0003057,4.47e-08,12;UBERON:0002420,5.69e-07,8;UBERON:0007245,5.69e-07,8;UBERON:0010009,5.69e-07,8;UBERON:0010011,5.69e-07,8;UBERON:0000454,5.69e-07,8 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,7.82398269389842,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,1.56478268869608,5.01457859675027,0.878744730937887,0.777719596297134,1.1198913730029,1.43752564364972,0,0,1.00828139742739,0.257259436035947,0,0,29.1335703637821,39.6743234454025,32.3254015788151,0.338844532069132,0,0,0,0,4.79360176829448,6.14749288514487,16.9014068062819,23.8960510847092,22.7150958259493,21.7094748146891,23.6329338818226,20.4559634688973,18.2106394934649,30.3342199581307,30.8324466798288,19.5361627270337,19.3544231902867,31.1251639043257,23.4208367622169,29.1711487511786,18.9844439320939,19.1339287410771,22.9197371665215,22.0971439105251,17.938831780687,27.0279196446686,0.454357159999104,0.226714680320357,0,0,0,0,0,0,1.40444420131752,0.511290967734173,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.45673551887624,0,3.11728492036132,2.4287945747259,3.04465478312141,1.84492397804847,2.56228488939458,1.76383060703557,0.251333182659351,0.741584903203122,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,30.1564220921894,25.9713916448684,0,0.11981512450592,0,0,22.6183865501282,38.8875512395833,24.7539073662343,48.8446339740297,41.9373350021742,19.1165000994795,21.5780879880118,0.203678727700633,0,0,2.31486041475121,0.520481771850815,4.13823787980251,2.70093194708024,5.12396380641431,5.78310242786287,6.40568601424249,6.74652416830048,6.46758426847539,0,0.189106080167819,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0,0,0,34.9081314616451,21.5070639872704,0,0,0.213288250535234,1.16118335930219,1.28867461322093,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0.597423819763102,0,0.685491075658373,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,16.0550589987792,12.1900154055891,0,0,4.10160685241134,5.0757036758563,7.53981892064796,1.43381278771531,2.00518806674155,3.96307143104365,4.04810701674894,6.72188473196017,7.11518000303742,34.7027021735552,0.709700426041343,0.534196811001766,0.162886959353576,0,2.65490276679926,1.21390318077491,2.11626489875326,0.565815239267694,2.06711325016541,1.53717573971964,1.03371317267288,1.81766864738753,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,24.5116516142727,2.70091641046965,5.30370603509293,4.50107773566344,6.38424841112185,6.0645397984704,4.77192159746151,10.656273219011,0,1.69465656691056,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,17.0591277849669,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.474503990371703,1.01659733563424,0.756037385752609,0.836353184057875,0.87345025498471,0.674321731924103,0.826534557253359,0.26175594198403,0,0.621339313086926,0,1.64468200648377,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.821500670520278,0.5208175393758,0.629156066554265,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.563047426353546,0.183151624267265,1.07184189539533,0.501572104035363,56.4751842617067,55.2390283808612,71.6119391799246,73.2094556784109,73.9889121352294,80.0717531233083,57.3769125197035,67.9985016868573,68.8776461655991,71.4509230217512,1.764384908931,4.78829848081237,5.80494259564056,5.34834777550247,3.77303692730368,3.8607136774503,3.33370091702423,3.29656091582231,2.24643446714271,4.29585259998456,2.78827229879264,3.01802146217722,3.46473577638565,2.68905640100451,3.56099907524802,3.33405583898152,3.59241410429052,2.12200142510076,4.12085900803307,2.79677948255355,3.08582327146874,3.37204031702741,2.86123427936785,3.77900683244054,2.91739079287525,2.96151127620868,2.56099162021882,2.36762740294059,2.17286582153379,2.24456908663095,2.60997039873183,2.85662998889134,2.86461730218783,2.94379998253335,3.66522560864169,13.4897712086491,2.33931608445408,3.86767897286937,1.53030665655075,1.10295709559758,0.463735671240843 | |||
|short_description=p1@Tmem198 | |||
}} |
Revision as of 01:05, 6 August 2015
Short description: | p1@Tmem198 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem198_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000050899, ENSMUST00000113575, ENSMUST00000148980, NM_177056, uc007bpl.2, uc007bpm.2_5end |
EntrezGene: | 319998 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.68e-20 | 33 |
neuronal stem cell | 4.68e-20 | 33 |
neuroblast | 4.68e-20 | 33 |
electrically signaling cell | 4.68e-20 | 33 |
neural cell | 6.24e-18 | 43 |
ectodermal cell | 3.63e-17 | 44 |
neurectodermal cell | 3.63e-17 | 44 |
CNS neuron (sensu Vertebrata) | 6.29e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.29e-17 | 23 |
electrically responsive cell | 8.02e-15 | 39 |
electrically active cell | 8.02e-15 | 39 |