FFCP PHASE1:Mm9::chr5:123440486..123440504,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:123440486..123440504,-|id=chr5:123440486..123440504,-|ontology_enrichment_celltype=CL:0000838!1.11e-39!12;CL:0000542!1.73e-36!13;CL:0000051!1.73e-36!13;CL:0000791!2.15e-36!9;CL:0000789!2.15e-36!9;CL:0002420!2.15e-36!9;CL:0002419!2.15e-36!9;CL:0000790!2.15e-36!9;CL:0000084!5.84e-36!11;CL:0000827!5.84e-36!11;CL:0000624!1.43e-32!8;CL:0000738!1.82e-27!17;CL:0002087!1.82e-27!17;CL:0000988!9.39e-26!32;CL:0002032!9.39e-26!32;CL:0000037!9.39e-26!32;CL:0000566!9.39e-26!32;CL:0000837!9.39e-26!32;CL:0002031!3.73e-25!25;CL:0000893!1.08e-24!6;CL:0002489!1.08e-24!6;CL:0000898!1.08e-24!6;CL:0000809!1.08e-24!6;CL:0000810!1.08e-24!6;CL:0000895!1.08e-24!6;CL:0000808!1.08e-24!6;CL:0000894!1.08e-24!6;CL:0000806!1.08e-24!6;CL:0000807!1.08e-24!6;CL:0000805!1.08e-24!6;CL:0002425!1.08e-24!6;CL:0002436!1.08e-24!6;CL:0002427!1.08e-24!6;CL:0002428!1.08e-24!6;CL:0002429!1.08e-24!6;CL:0002433!1.08e-24!6;CL:0002431!1.08e-24!6;CL:0002432!1.08e-24!6;CL:0002320!4.33e-17!46;CL:0000134!4.33e-17!46;CL:0000219!3.69e-16!54;CL:0000063!4.48e-11!66;CL:0000034!5.99e-09!97;CL:0000144!1.64e-07!121;CL:0000012!1.64e-07!121;CL:0000723!2.88e-07!91;CL:0000048!2.88e-07!91|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-78,9;CL:0000789,2.30e-78,9;CL:0002420,2.30e-78,9;CL:0002419,2.30e-78,9;CL:0000790,2.30e-78,9;CL:0000838,3.62e-72,12;CL:0000624,6.80e-70,8;CL:0000542,1.30e-66,13;CL:0000051,1.30e-66,13;CL:0000084,4.15e-64,11;CL:0000827,4.15e-64,11;CL:0000893,1.87e-52,6;CL:0002489,1.87e-52,6;CL:0000898,1.87e-52,6;CL:0000809,1.87e-52,6;CL:0000810,1.87e-52,6;CL:0000895,1.87e-52,6;CL:0000808,1.87e-52,6;CL:0000894,1.87e-52,6;CL:0000806,1.87e-52,6;CL:0000807,1.87e-52,6;CL:0000805,1.87e-52,6;CL:0002425,1.87e-52,6;CL:0002436,1.87e-52,6;CL:0002427,1.87e-52,6;CL:0002428,1.87e-52,6;CL:0002429,1.87e-52,6;CL:0002433,1.87e-52,6;CL:0002431,1.87e-52,6;CL:0002432,1.87e-52,6;CL:0000738,6.54e-51,17;CL:0002087,6.54e-51,17;CL:0002031,1.48e-34,25;CL:0000988,6.13e-27,32;CL:0002032,6.13e-27,32;CL:0000037,6.13e-27,32;CL:0000837,6.13e-27,32;CL:0002320,1.23e-18,46;CL:0000134,1.23e-18,46;CL:0000219,8.19e-16,54;CL:0000815,3.04e-10,1;CL:0000792,3.04e-10,1;CL:0000625,5.62e-10,1;CL:0000945,1.03e-09,1;CL:0000236,1.03e-09,1;CL:0000826,1.03e-09,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.33e-17!46;UBERON:0002370!8.61e-13!23;UBERON:0000974!8.61e-13!23;UBERON:0004807!8.61e-13!23;UBERON:0005058!8.61e-13!23;UBERON:0003351!8.61e-13!23;UBERON:0009113!8.61e-13!23;UBERON:0003295!8.61e-13!23;UBERON:0009722!8.61e-13!23;UBERON:0005562!8.61e-13!23;UBERON:0007690!8.61e-13!23;UBERON:0006562!3.36e-12!24;UBERON:0003408!3.36e-12!24;UBERON:0001557!3.36e-12!24;UBERON:0001042!3.36e-12!24;UBERON:0008814!3.36e-12!24;UBERON:0009145!3.36e-12!24;UBERON:0000072!1.09e-10!27;UBERON:0004177!7.45e-10!29;UBERON:0002390!8.46e-09!45;UBERON:0003061!8.46e-09!45;UBERON:0002193!3.94e-08!48;UBERON:0000063!6.34e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.23e-18,46;UBERON:0002370,1.01e-13,23;UBERON:0000974,1.01e-13,23;UBERON:0004807,1.01e-13,23;UBERON:0005058,1.01e-13,23;UBERON:0003351,1.01e-13,23;UBERON:0009113,1.01e-13,23;UBERON:0003295,1.01e-13,23;UBERON:0009722,1.01e-13,23;UBERON:0005562,1.01e-13,23;UBERON:0007690,1.01e-13,23;UBERON:0006562,3.81e-13,24;UBERON:0003408,3.81e-13,24;UBERON:0001557,3.81e-13,24;UBERON:0001042,3.81e-13,24;UBERON:0008814,3.81e-13,24;UBERON:0009145,3.81e-13,24;UBERON:0000072,1.12e-11,27;UBERON:0004177,7.31e-11,29;UBERON:0005057,7.31e-11,29;UBERON:0000077,5.62e-09,35;UBERON:0007811,1.01e-08,36;UBERON:0000065,1.23e-07,41;UBERON:0001004,1.89e-07,42;UBERON:0000153,2.84e-07,43;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45|phase1_expression=0,0,0,0,0,0,0,12.1375924035082,34.9156030936133,22.9383235795554,2.91070545983358,2.07407613387875,11.2992481754596,5.24522414513984,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,15.9579671242496,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:123440486..123440504,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:123440486..123440504,- | |||
|description=CAGE_peak_at_chr5:123440486..123440504,- | |||
|id=chr5:123440486..123440504,- | |||
|ontology_enrichment_celltype=CL:0000838!1.11e-39!12;CL:0000542!1.73e-36!13;CL:0000051!1.73e-36!13;CL:0000791!2.15e-36!9;CL:0000789!2.15e-36!9;CL:0002420!2.15e-36!9;CL:0002419!2.15e-36!9;CL:0000790!2.15e-36!9;CL:0000084!5.84e-36!11;CL:0000827!5.84e-36!11;CL:0000624!1.43e-32!8;CL:0000738!1.82e-27!17;CL:0002087!1.82e-27!17;CL:0000988!9.39e-26!32;CL:0002032!9.39e-26!32;CL:0000037!9.39e-26!32;CL:0000566!9.39e-26!32;CL:0000837!9.39e-26!32;CL:0002031!3.73e-25!25;CL:0000893!1.08e-24!6;CL:0002489!1.08e-24!6;CL:0000898!1.08e-24!6;CL:0000809!1.08e-24!6;CL:0000810!1.08e-24!6;CL:0000895!1.08e-24!6;CL:0000808!1.08e-24!6;CL:0000894!1.08e-24!6;CL:0000806!1.08e-24!6;CL:0000807!1.08e-24!6;CL:0000805!1.08e-24!6;CL:0002425!1.08e-24!6;CL:0002436!1.08e-24!6;CL:0002427!1.08e-24!6;CL:0002428!1.08e-24!6;CL:0002429!1.08e-24!6;CL:0002433!1.08e-24!6;CL:0002431!1.08e-24!6;CL:0002432!1.08e-24!6;CL:0002320!4.33e-17!46;CL:0000134!4.33e-17!46;CL:0000219!3.69e-16!54;CL:0000063!4.48e-11!66;CL:0000034!5.99e-09!97;CL:0000144!1.64e-07!121;CL:0000012!1.64e-07!121;CL:0000723!2.88e-07!91;CL:0000048!2.88e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.30e-78,9;CL:0000789,2.30e-78,9;CL:0002420,2.30e-78,9;CL:0002419,2.30e-78,9;CL:0000790,2.30e-78,9;CL:0000838,3.62e-72,12;CL:0000624,6.80e-70,8;CL:0000542,1.30e-66,13;CL:0000051,1.30e-66,13;CL:0000084,4.15e-64,11;CL:0000827,4.15e-64,11;CL:0000893,1.87e-52,6;CL:0002489,1.87e-52,6;CL:0000898,1.87e-52,6;CL:0000809,1.87e-52,6;CL:0000810,1.87e-52,6;CL:0000895,1.87e-52,6;CL:0000808,1.87e-52,6;CL:0000894,1.87e-52,6;CL:0000806,1.87e-52,6;CL:0000807,1.87e-52,6;CL:0000805,1.87e-52,6;CL:0002425,1.87e-52,6;CL:0002436,1.87e-52,6;CL:0002427,1.87e-52,6;CL:0002428,1.87e-52,6;CL:0002429,1.87e-52,6;CL:0002433,1.87e-52,6;CL:0002431,1.87e-52,6;CL:0002432,1.87e-52,6;CL:0000738,6.54e-51,17;CL:0002087,6.54e-51,17;CL:0002031,1.48e-34,25;CL:0000988,6.13e-27,32;CL:0002032,6.13e-27,32;CL:0000037,6.13e-27,32;CL:0000837,6.13e-27,32;CL:0002320,1.23e-18,46;CL:0000134,1.23e-18,46;CL:0000219,8.19e-16,54;CL:0000815,3.04e-10,1;CL:0000792,3.04e-10,1;CL:0000625,5.62e-10,1;CL:0000945,1.03e-09,1;CL:0000236,1.03e-09,1;CL:0000826,1.03e-09,1;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.33e-17!46;UBERON:0002370!8.61e-13!23;UBERON:0000974!8.61e-13!23;UBERON:0004807!8.61e-13!23;UBERON:0005058!8.61e-13!23;UBERON:0003351!8.61e-13!23;UBERON:0009113!8.61e-13!23;UBERON:0003295!8.61e-13!23;UBERON:0009722!8.61e-13!23;UBERON:0005562!8.61e-13!23;UBERON:0007690!8.61e-13!23;UBERON:0006562!3.36e-12!24;UBERON:0003408!3.36e-12!24;UBERON:0001557!3.36e-12!24;UBERON:0001042!3.36e-12!24;UBERON:0008814!3.36e-12!24;UBERON:0009145!3.36e-12!24;UBERON:0000072!1.09e-10!27;UBERON:0004177!7.45e-10!29;UBERON:0002390!8.46e-09!45;UBERON:0003061!8.46e-09!45;UBERON:0002193!3.94e-08!48;UBERON:0000063!6.34e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.23e-18,46;UBERON:0002370,1.01e-13,23;UBERON:0000974,1.01e-13,23;UBERON:0004807,1.01e-13,23;UBERON:0005058,1.01e-13,23;UBERON:0003351,1.01e-13,23;UBERON:0009113,1.01e-13,23;UBERON:0003295,1.01e-13,23;UBERON:0009722,1.01e-13,23;UBERON:0005562,1.01e-13,23;UBERON:0007690,1.01e-13,23;UBERON:0006562,3.81e-13,24;UBERON:0003408,3.81e-13,24;UBERON:0001557,3.81e-13,24;UBERON:0001042,3.81e-13,24;UBERON:0008814,3.81e-13,24;UBERON:0009145,3.81e-13,24;UBERON:0000072,1.12e-11,27;UBERON:0004177,7.31e-11,29;UBERON:0005057,7.31e-11,29;UBERON:0000077,5.62e-09,35;UBERON:0007811,1.01e-08,36;UBERON:0000065,1.23e-07,41;UBERON:0001004,1.89e-07,42;UBERON:0000153,2.84e-07,43;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,12.1375924035082,34.9156030936133,22.9383235795554,2.91070545983358,2.07407613387875,11.2992481754596,5.24522414513984,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,15.9579671242496,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:123440486..123440504,- | |||
}} |
Latest revision as of 06:18, 6 August 2015
Short description: | p@chr5:123440486..123440504, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:123440486..123440504, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.23e-18 | 46 |
thymus | 1.01e-13 | 23 |
neck | 1.01e-13 | 23 |
respiratory system epithelium | 1.01e-13 | 23 |
hemolymphoid system gland | 1.01e-13 | 23 |
pharyngeal epithelium | 1.01e-13 | 23 |
thymic region | 1.01e-13 | 23 |
pharyngeal gland | 1.01e-13 | 23 |
entire pharyngeal arch endoderm | 1.01e-13 | 23 |
thymus primordium | 1.01e-13 | 23 |
early pharyngeal endoderm | 1.01e-13 | 23 |
pharynx | 3.81e-13 | 24 |
gland of gut | 3.81e-13 | 24 |
upper respiratory tract | 3.81e-13 | 24 |
chordate pharynx | 3.81e-13 | 24 |
pharyngeal arch system | 3.81e-13 | 24 |
pharyngeal region of foregut | 3.81e-13 | 24 |
segment of respiratory tract | 1.12e-11 | 27 |
hemopoietic organ | 7.31e-11 | 29 |
immune organ | 7.31e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 5.62e-09 | 35 |
craniocervical region | 1.01e-08 | 36 |
respiratory tract | 1.23e-07 | 41 |
respiratory system | 1.89e-07 | 42 |
anterior region of body | 2.84e-07 | 43 |
hematopoietic system | 6.11e-07 | 45 |
blood island | 6.11e-07 | 45 |