FFCP PHASE1:Hg19::chr12:53491441..53491458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3489 | |EntrezGene=3489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5475 | |HGNC=5475 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVA5 | |UniProt=F8VVA5 | ||
|association_with_transcript=0bp_to_ENST00000548176_5end | |association_with_transcript=0bp_to_ENST00000548176_5end | ||
|cluster_id=chr12:53491441..53491458,+ | |||
|coexpression_cluster_id=C3293 | |coexpression_cluster_id=C3293 | ||
|description=CAGE_peak_1_at_IGFBP6_5end | |description=CAGE_peak_1_at_IGFBP6_5end | ||
|id=chr12:53491441..53491458,+ | |id=chr12:53491441..53491458,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.76e-32!180;CL:0000680!6.90e-21!57;CL:0000056!6.90e-21!57;CL:0000355!6.90e-21!57;CL:0000183!2.00e-20!59;CL:0000187!2.25e-20!54;CL:0000057!2.26e-20!75;CL:0000192!1.03e-16!42;CL:0000514!1.03e-16!42;CL:0000393!2.44e-16!60;CL:0000211!2.44e-16!60;CL:0000222!6.11e-15!119;CL:0000359!7.70e-13!32;CL:0000220!6.16e-10!246;CL:0002321!1.32e-09!248;CL:0002620!7.02e-09!23 | |ontology_enrichment_celltype=CL:0000055!1.76e-32!180;CL:0000680!6.90e-21!57;CL:0000056!6.90e-21!57;CL:0000355!6.90e-21!57;CL:0000183!2.00e-20!59;CL:0000187!2.25e-20!54;CL:0000057!2.26e-20!75;CL:0000192!1.03e-16!42;CL:0000514!1.03e-16!42;CL:0000393!2.44e-16!60;CL:0000211!2.44e-16!60;CL:0000222!6.11e-15!119;CL:0000359!7.70e-13!32;CL:0000220!6.16e-10!246;CL:0002321!1.32e-09!248;CL:0002620!7.02e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000192;7.01e-13;43!CL:0000359;2.03e-12;32!CL:0000187;6.81e-12;55!CL:0000393;2.45e-09;61!CL:0000211;2.45e-09;61!CL:0002620;5.33e-09;23!CL:0000057;2.66e-08;73!CL:0002494;8.72e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.60e-22,58;CL:0000056,9.60e-22,58;CL:0000355,9.60e-22,58;CL:0000187,3.19e-21,55;CL:0000057,5.39e-21,76;CL:0000192,1.73e-17,43;CL:0000514,1.73e-17,43;CL:0000393,5.73e-17,61;CL:0000211,5.73e-17,61;CL:0000222,1.77e-15,121;CL:0000359,4.89e-13,32;CL:0002321,1.32e-09,250;CL:0002620,5.22e-09,23;CL:0002494,8.88e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.01e-13;43!CL:0000355;8.91e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.25e-24!365;UBERON:0000914!2.93e-23!83;UBERON:0002329!2.93e-23!83;UBERON:0003077!2.93e-23!83;UBERON:0003059!2.93e-23!83;UBERON:0007282!2.93e-23!83;UBERON:0009618!2.93e-23!83;UBERON:0007285!2.93e-23!83;UBERON:0002100!1.19e-22!216;UBERON:0004290!1.07e-21!70;UBERON:0005256!1.69e-21!143;UBERON:0002385!3.89e-21!63;UBERON:0001015!3.89e-21!63;UBERON:0000383!3.89e-21!63;UBERON:0000481!7.02e-21!347;UBERON:0001134!7.31e-21!61;UBERON:0002036!7.31e-21!61;UBERON:0003082!7.31e-21!61;UBERON:0000486!2.25e-20!82;UBERON:0003104!1.36e-19!238;UBERON:0009142!1.36e-19!238;UBERON:0000468!8.14e-15!659;UBERON:0004872!7.80e-14!84;UBERON:0000119!8.83e-14!312;UBERON:0000490!1.81e-13!138;UBERON:0000483!3.48e-13!309;UBERON:0003102!9.92e-13!95;UBERON:0000467!2.50e-12!625;UBERON:0000480!4.08e-12!626;UBERON:0003914!7.15e-12!118;UBERON:0001637!8.21e-12!42;UBERON:0003509!8.21e-12!42;UBERON:0004572!8.21e-12!42;UBERON:0004573!2.29e-11!33;UBERON:0004571!2.29e-11!33;UBERON:0000477!1.05e-10!286;UBERON:0001981!2.56e-10!60;UBERON:0007500!2.56e-10!60;UBERON:0004537!2.56e-10!60;UBERON:0006965!2.56e-10!60;UBERON:0002049!3.33e-10!79;UBERON:0007798!3.33e-10!79;UBERON:0000926!5.61e-10!448;UBERON:0004120!5.61e-10!448;UBERON:0006603!5.61e-10!448;UBERON:0004111!1.65e-09!241;UBERON:0000055!7.28e-09!69;UBERON:0003103!9.30e-09!69;UBERON:0000922!8.98e-08!612;UBERON:0002050!9.87e-08!605;UBERON:0005423!9.87e-08!605;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0000948!2.08e-07!24;UBERON:0005498!2.08e-07!24;UBERON:0004140!2.08e-07!24;UBERON:0009881!2.08e-07!24;UBERON:0004141!2.08e-07!24;UBERON:0003084!2.08e-07!24;UBERON:0007005!2.08e-07!24;UBERON:0004139!2.08e-07!24;UBERON:0004291!2.08e-07!24;UBERON:0007100!2.16e-07!27;UBERON:0000062!2.64e-07!511;UBERON:0001009!3.25e-07!113;UBERON:0004535!5.02e-07!110 | |ontology_enrichment_uberon=UBERON:0000475!9.25e-24!365;UBERON:0000914!2.93e-23!83;UBERON:0002329!2.93e-23!83;UBERON:0003077!2.93e-23!83;UBERON:0003059!2.93e-23!83;UBERON:0007282!2.93e-23!83;UBERON:0009618!2.93e-23!83;UBERON:0007285!2.93e-23!83;UBERON:0002100!1.19e-22!216;UBERON:0004290!1.07e-21!70;UBERON:0005256!1.69e-21!143;UBERON:0002385!3.89e-21!63;UBERON:0001015!3.89e-21!63;UBERON:0000383!3.89e-21!63;UBERON:0000481!7.02e-21!347;UBERON:0001134!7.31e-21!61;UBERON:0002036!7.31e-21!61;UBERON:0003082!7.31e-21!61;UBERON:0000486!2.25e-20!82;UBERON:0003104!1.36e-19!238;UBERON:0009142!1.36e-19!238;UBERON:0000468!8.14e-15!659;UBERON:0004872!7.80e-14!84;UBERON:0000119!8.83e-14!312;UBERON:0000490!1.81e-13!138;UBERON:0000483!3.48e-13!309;UBERON:0003102!9.92e-13!95;UBERON:0000467!2.50e-12!625;UBERON:0000480!4.08e-12!626;UBERON:0003914!7.15e-12!118;UBERON:0001637!8.21e-12!42;UBERON:0003509!8.21e-12!42;UBERON:0004572!8.21e-12!42;UBERON:0004573!2.29e-11!33;UBERON:0004571!2.29e-11!33;UBERON:0000477!1.05e-10!286;UBERON:0001981!2.56e-10!60;UBERON:0007500!2.56e-10!60;UBERON:0004537!2.56e-10!60;UBERON:0006965!2.56e-10!60;UBERON:0002049!3.33e-10!79;UBERON:0007798!3.33e-10!79;UBERON:0000926!5.61e-10!448;UBERON:0004120!5.61e-10!448;UBERON:0006603!5.61e-10!448;UBERON:0004111!1.65e-09!241;UBERON:0000055!7.28e-09!69;UBERON:0003103!9.30e-09!69;UBERON:0000922!8.98e-08!612;UBERON:0002050!9.87e-08!605;UBERON:0005423!9.87e-08!605;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0000948!2.08e-07!24;UBERON:0005498!2.08e-07!24;UBERON:0004140!2.08e-07!24;UBERON:0009881!2.08e-07!24;UBERON:0004141!2.08e-07!24;UBERON:0003084!2.08e-07!24;UBERON:0007005!2.08e-07!24;UBERON:0004139!2.08e-07!24;UBERON:0004291!2.08e-07!24;UBERON:0007100!2.16e-07!27;UBERON:0000062!2.64e-07!511;UBERON:0001009!3.25e-07!113;UBERON:0004535!5.02e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.67e-10;33!UBERON:0004571;2.67e-10;33!UBERON:0001637;1.54e-08;42!UBERON:0003509;1.54e-08;42!UBERON:0004572;1.54e-08;42!UBERON:0002385;2.58e-08;31!UBERON:0001015;2.58e-08;31!UBERON:0000383;2.58e-08;31!UBERON:0002384;5.23e-07;198!UBERON:0000948;8.39e-07;22!UBERON:0007100;8.50e-07;25 | |||
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| ||
|short_description=p1@IGFBP6 | |short_description=p1@IGFBP6 | ||
}} | }} |
Latest revision as of 01:39, 19 September 2015
Short description: | p1@IGFBP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFBP6_5end |
Coexpression cluster: | C3293_Mesenchymal_Smooth_Synoviocyte_tenocyte_leiomyoma_Cardiac_Fibroblast |
Association with transcript: | 0bp_to_ENST00000548176_5end |
EntrezGene: | IGFBP6 |
HGNC: | 5475 |
UniProt: | F8VVA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.60e-22 | 58 |
myoblast | 9.60e-22 | 58 |
multi-potent skeletal muscle stem cell | 9.60e-22 | 58 |
muscle cell | 3.19e-21 | 55 |
fibroblast | 5.39e-21 | 76 |
smooth muscle cell | 1.73e-17 | 43 |
smooth muscle myoblast | 1.73e-17 | 43 |
electrically responsive cell | 5.73e-17 | 61 |
electrically active cell | 5.73e-17 | 61 |
mesodermal cell | 1.77e-15 | 121 |
vascular associated smooth muscle cell | 4.89e-13 | 32 |
embryonic cell | 1.32e-09 | 250 |
skin fibroblast | 5.22e-09 | 23 |
cardiocyte | 8.88e-07 | 16 |