FFCP PHASE1:Hg19::chr13:100642926..100642934,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100642926..100642934,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr13:100642926..100642934,+ | |||
|id=chr13:100642926..100642934,+ | |||
|ontology_enrichment_celltype=CL:0000708!8.80e-13!3;CL:0002603!1.42e-12!3;CL:0002575!1.41e-09!2;CL:0000128!4.27e-09!7;CL:0000126!4.27e-09!7;CL:0000127!4.27e-09!7;CL:0002453!4.27e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002575;6.30e-21;2!CL:0000669;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,6.96e-21,2;CL:0000669,3.79e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-61!57;UBERON:0005068!1.28e-61!57;UBERON:0006241!1.28e-61!57;UBERON:0007135!1.28e-61!57;UBERON:0002616!1.98e-59!59;UBERON:0001017!4.35e-52!82;UBERON:0000073!8.49e-50!94;UBERON:0001016!8.49e-50!94;UBERON:0003076!1.48e-49!15;UBERON:0003057!1.48e-49!15;UBERON:0005743!2.48e-49!86;UBERON:0000955!5.24e-49!69;UBERON:0006238!5.24e-49!69;UBERON:0004733!3.06e-46!12;UBERON:0002028!3.06e-46!12;UBERON:0007277!3.06e-46!12;UBERON:0003075!6.61e-44!86;UBERON:0007284!6.61e-44!86;UBERON:0004732!1.79e-42!13;UBERON:0002346!1.29e-41!90;UBERON:0002020!5.00e-35!34;UBERON:0003528!5.00e-35!34;UBERON:0002680!5.87e-35!9;UBERON:0001895!5.87e-35!9;UBERON:0010092!5.87e-35!9;UBERON:0002791!1.70e-28!33;UBERON:0000033!3.87e-28!123;UBERON:0001893!1.45e-27!34;UBERON:0004121!1.96e-27!169;UBERON:0000924!1.33e-26!173;UBERON:0006601!1.33e-26!173;UBERON:0000153!1.77e-26!129;UBERON:0007811!1.77e-26!129;UBERON:0001869!8.65e-26!32;UBERON:0002780!3.06e-25!41;UBERON:0001890!3.06e-25!41;UBERON:0006240!3.06e-25!41;UBERON:0002037!1.48e-24!6;UBERON:0006215!1.48e-24!6;UBERON:0003080!1.49e-24!42;UBERON:0002298!1.15e-23!8;UBERON:0002308!2.36e-20!9;UBERON:0000125!2.36e-20!9;UBERON:0007023!7.25e-20!115;UBERON:0003056!9.35e-20!61;UBERON:0000956!1.19e-18!25;UBERON:0000203!1.19e-18!25;UBERON:0002619!5.25e-18!22;UBERON:0001950!2.74e-16!20;UBERON:0002420!7.46e-15!9;UBERON:0007245!7.46e-15!9;UBERON:0010009!7.46e-15!9;UBERON:0010011!7.46e-15!9;UBERON:0000454!7.46e-15!9;UBERON:0009663!1.18e-13!7;UBERON:0001896!5.67e-13!3;UBERON:0005290!5.67e-13!3;UBERON:0010096!5.67e-13!3;UBERON:0000025!6.45e-13!194;UBERON:0002771!7.21e-13!3;UBERON:0006331!8.46e-13!3;UBERON:0003210!8.80e-13!3;UBERON:0000988!3.76e-12!3;UBERON:0001871!4.88e-12!7;UBERON:0000200!8.00e-11!6;UBERON:0000064!1.43e-10!219;UBERON:0000119!3.25e-10!312;UBERON:0000477!3.83e-10!286;UBERON:0004111!5.49e-09!241;UBERON:0002148!5.85e-09!2;UBERON:0009662!5.85e-09!2;UBERON:0000369!8.71e-09!4;UBERON:0002435!8.71e-09!4;UBERON:0000204!8.71e-09!4;UBERON:0010082!8.71e-09!4;UBERON:0000483!4.83e-08!309;UBERON:0001872!1.91e-07!5;UBERON:0000349!2.09e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.14e-60;6!UBERON:0004733;4.93e-53;12!UBERON:0002028;4.93e-53;12!UBERON:0004732;4.92e-49;13!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0001896;1.96e-14;3!UBERON:0005290;1.96e-14;3!UBERON:0000073;2.27e-09;53!UBERON:0002616;2.27e-09;53!UBERON:0002298;7.01e-08;6!UBERON:0000955;6.17e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0004733,4.61e-53,12;UBERON:0002028,4.61e-53,12;UBERON:0007277,4.61e-53,12;UBERON:0004732,4.63e-49,13;UBERON:0003076,1.18e-42,15;UBERON:0003057,1.18e-42,15;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0001896,1.83e-14,3;UBERON:0005290,1.83e-14,3;UBERON:0010096,1.83e-14,3;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0001017,2.54e-08,81;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86;UBERON:0002298,6.78e-08,6;UBERON:0001016,1.45e-07,89 | |||
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|short_description=p@chr13:100642926..100642934,+ | |||
}} |
Latest revision as of 14:12, 24 July 2015
Short description: | p@chr13:100642926..100642934, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100642926..100642934, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 6.96e-21 | 2 |
pericyte cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
segmental subdivision of hindbrain | 4.61e-53 | 12 |
hindbrain | 4.61e-53 | 12 |
presumptive hindbrain | 4.61e-53 | 12 |
segmental subdivision of nervous system | 4.63e-49 | 13 |
posterior neural tube | 1.18e-42 | 15 |
chordal neural plate | 1.18e-42 | 15 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
medulla oblongata | 1.83e-14 | 3 |
myelencephalon | 1.83e-14 | 3 |
future myelencephalon | 1.83e-14 | 3 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
brainstem | 6.78e-08 | 6 |
nervous system | 1.45e-07 | 89 |