FFCP PHASE1:Hg19::chr20:31361765..31361769,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:31361765..31361769,+ | |||
|id=chr20:31361765..31361769,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.50e-08!7;CL:0000586!3.50e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.74e-19;5!CL:0000039;4.91e-14;7!CL:0000586;4.91e-14;7!CL:0000540;4.84e-10;6!CL:0000404;4.84e-10;6!CL:0000319;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.55e-19,5;CL:0000039,6.23e-14,7;CL:0000586,6.23e-14,7;CL:0000047,1.45e-12,8;CL:0000540,4.71e-10,6;CL:0000031,4.71e-10,6;CL:0000404,4.71e-10,6;CL:0000319,3.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.14e-15;10!UBERON:0005564;8.14e-15;10!CL:0000031;4.84e-10;6 | |||
|ontology_enrichment_disease=DOID:162!9.00e-25!235;DOID:14566!2.01e-23!239;DOID:0050687!2.51e-17!143;DOID:305!1.24e-10!106;DOID:3095!2.43e-10!22;DOID:2994!2.43e-10!22;DOID:0050686!8.45e-10!137;DOID:8692!7.47e-08!31;DOID:1240!2.56e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.95e-12;22!DOID:2994;1.95e-12;22!DOID:8692;5.12e-11;31!DOID:1240;4.96e-08;39!DOID:1799;4.33e-07;1!DOID:10165;4.33e-07;1!DOID:3030;4.33e-07;1!DOID:1798;4.33e-07;1!DOID:1036;5.06e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.53e-12,22;DOID:2994,2.53e-12,22;DOID:8692,3.84e-11,31;DOID:1240,1.29e-08,39;DOID:162,2.11e-08,235;DOID:14566,3.94e-08,239;DOID:1799,2.84e-07,1;DOID:10165,2.84e-07,1;DOID:1798,2.84e-07,1;DOID:3030,3.02e-07,1;DOID:1036,5.40e-07,8;DOID:305,8.87e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.68e-12;8!UBERON:0003135;5.67e-09;11!UBERON:0000991;6.27e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.29e-12,8;UBERON:0003135,6.57e-09,11;UBERON:0000991,7.72e-07,21;UBERON:0009196,7.72e-07,21;UBERON:0009117,7.72e-07,21;UBERON:0005564,7.72e-07,21 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.657751618414705,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0.302256294682921,0,0,0.272746120590835,0,2.19552671033272,2.25300606146525,0.929551542956147,1.34759371519982,2.52320850875628,8.75945661781992,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.784596007954691,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0.546273504020151,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0,0.328014645699706,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0.962479855263359,0,0,0.432807638929335,0.213425530045242,0,2.3949524571938,0.766021480529467,4.23347165447766,0.324621940274555,0.561594356226918,0.228234679033192,0,2.50634477090067,1.35433422241283,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0.540911356951966,0,4.22961015263549,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0.556543525114529,0,1.05562704063997,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0,1.99613798001194,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0.922255617552241,0.897576444097721,0.977826347298073,0,0,0,0,1.09886179476517,0,0.225595660617181,1.37243774022418,0.335643173951685,1.13852239634511,0.158936578980379,0.632994193584081,1.30586246527318,1.27217764290547,0,0.995261931078505,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0.311064574191741,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.114536596165916,0.343189995723929,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0.136905378891993,0,0.859530882839914,0,0,0,0,0.798716001995964,0,0,0,0.360299883542404,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,5.30485389934563,6.32681408347275,4.98528405635022,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,1.0362910251936,0.303859956177382,0,0.194860308839388,0,0.163565394255844,0,1.72041036127604,0,0,0.426766918776564,0,0,0.184105950251841,0,0,0.255788742607303,0.107824811396682,0.157265941855896,0.218419276384028,0.169732529954025,0.425149840203366,0.247871528518004,0,0,0.394308725006267,0,0,0,0,0,0.159633859057151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| |||
|short_description=p@chr20:31361765..31361769,+ | |||
}} |
Revision as of 10:46, 21 January 2014
Short description: | p@chr20:31361765..31361769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:31361765..31361769, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.55e-19 | 5 |
germ line cell | 6.23e-14 | 7 |
germ cell | 6.23e-14 | 7 |
neuronal stem cell | 1.45e-12 | 8 |
neuron | 4.71e-10 | 6 |
neuroblast | 4.71e-10 | 6 |
electrically signaling cell | 4.71e-10 | 6 |
mucus secreting cell | 3.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.29e-12 | 8 |
male reproductive organ | 6.57e-09 | 11 |
gonad | 7.72e-07 | 21 |
indifferent external genitalia | 7.72e-07 | 21 |
indifferent gonad | 7.72e-07 | 21 |
gonad primordium | 7.72e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.53e-12 | 22 |
germ cell cancer | 2.53e-12 | 22 |
myeloid leukemia | 3.84e-11 | 31 |
leukemia | 1.29e-08 | 39 |
cancer | 2.11e-08 | 235 |
disease of cellular proliferation | 3.94e-08 | 239 |
islet cell tumor | 2.84e-07 | 1 |
endocrine pancreas cancer | 2.84e-07 | 1 |
pancreatic endocrine carcinoma | 2.84e-07 | 1 |
mucinous adenocarcinoma | 3.02e-07 | 1 |
chronic leukemia | 5.40e-07 | 8 |
carcinoma | 8.87e-07 | 106 |