FFCP PHASE1:Hg19::chr15:63354769..63354809,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:63354769..63354809,+ to FFCP PHASE1:Hg19::chr15:63354769..63354809,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000558910_5end | |||
|cluster_id=chr15:63354769..63354809,+ | |||
|coexpression_cluster_id=C910 | |||
|description=CAGE_peak_8_at_TPM1_5end | |||
|id=chr15:63354769..63354809,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.91e-18!180;CL:0000192!1.53e-13!42;CL:0000514!1.53e-13!42;CL:0000222!3.95e-13!119;CL:0000359!7.11e-13!32;CL:0000680!5.99e-12!57;CL:0000056!5.99e-12!57;CL:0000355!5.99e-12!57;CL:0002321!4.38e-11!248;CL:0000187!4.70e-11!54;CL:0000220!8.37e-11!246;CL:0000393!1.23e-10!60;CL:0000211!1.23e-10!60;CL:0000183!3.17e-10!59;CL:0000057!3.55e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.61e-14;32!CL:0000192;8.16e-11;43!CL:0000077;1.33e-07;19!CL:0002334;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.63e-15,43;CL:0000514,4.63e-15,43;CL:0000359,6.72e-15,32;CL:0000680,1.44e-10,58;CL:0000056,1.44e-10,58;CL:0000355,1.44e-10,58;CL:0000222,1.62e-10,121;CL:0000187,1.55e-09,55;CL:0000393,3.04e-09,61;CL:0000211,3.04e-09,61;CL:0000057,8.90e-09,76;CL:0000077,1.15e-07,19;CL:0002334,9.69e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;8.16e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.43e-14!42;UBERON:0003509!7.43e-14!42;UBERON:0004572!7.43e-14!42;UBERON:0002385!1.50e-13!63;UBERON:0001015!1.50e-13!63;UBERON:0000383!1.50e-13!63;UBERON:0001134!6.89e-13!61;UBERON:0002036!6.89e-13!61;UBERON:0003082!6.89e-13!61;UBERON:0004872!2.05e-12!84;UBERON:0000914!5.39e-12!83;UBERON:0002329!5.39e-12!83;UBERON:0003077!5.39e-12!83;UBERON:0003059!5.39e-12!83;UBERON:0007282!5.39e-12!83;UBERON:0009618!5.39e-12!83;UBERON:0007285!5.39e-12!83;UBERON:0000486!5.93e-12!82;UBERON:0002049!1.20e-11!79;UBERON:0007798!1.20e-11!79;UBERON:0004290!1.30e-11!70;UBERON:0005256!1.36e-11!143;UBERON:0004573!1.91e-11!33;UBERON:0004571!1.91e-11!33;UBERON:0000468!1.09e-10!659;UBERON:0000475!1.39e-10!365;UBERON:0002100!1.82e-10!216;UBERON:0001009!3.86e-10!113;UBERON:0001981!4.63e-10!60;UBERON:0007500!4.63e-10!60;UBERON:0004537!4.63e-10!60;UBERON:0006965!4.63e-10!60;UBERON:0000481!9.34e-10!347;UBERON:0003914!1.27e-09!118;UBERON:0004535!2.22e-09!110;UBERON:0000490!2.70e-09!138;UBERON:0000055!3.48e-09!69;UBERON:0000467!1.12e-07!625;UBERON:0000480!1.23e-07!626;UBERON:0000483!1.88e-07!309;UBERON:0003104!2.28e-07!238;UBERON:0009142!2.28e-07!238;UBERON:0000119!3.64e-07!312;UBERON:0000947!4.25e-07!21;UBERON:0010191!4.25e-07!21;UBERON:0001135!5.96e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.60e-10;33!UBERON:0004571;2.60e-10;33!UBERON:0001637;4.56e-10;42!UBERON:0003509;4.56e-10;42!UBERON:0004572;4.56e-10;42!UBERON:0001135;9.63e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.73e-14,42;UBERON:0003509,3.73e-14,42;UBERON:0004572,3.73e-14,42;UBERON:0002385,4.52e-12,64;UBERON:0001015,4.52e-12,64;UBERON:0000383,4.52e-12,64;UBERON:0004573,1.09e-11,33;UBERON:0004571,1.09e-11,33;UBERON:0001134,2.61e-11,62;UBERON:0002036,2.61e-11,62;UBERON:0003082,2.61e-11,62;UBERON:0004872,2.11e-10,83;UBERON:0002049,2.59e-10,78;UBERON:0007798,2.59e-10,78;UBERON:0007524,3.62e-10,73;UBERON:0002329,5.46e-10,71;UBERON:0003059,5.46e-10,71;UBERON:0007282,5.46e-10,71;UBERON:0004290,5.46e-10,71;UBERON:0009618,5.46e-10,71;UBERON:0007503,5.84e-10,78;UBERON:0003077,1.21e-09,72;UBERON:0007285,1.21e-09,72;UBERON:0001009,1.65e-09,112;UBERON:0000486,2.32e-09,83;UBERON:0007500,3.25e-09,59;UBERON:0001981,3.25e-09,59;UBERON:0004537,3.25e-09,59;UBERON:0006965,3.25e-09,59;UBERON:0004535,1.20e-08,109;UBERON:0005256,4.84e-08,122;UBERON:0000055,7.98e-08,68;UBERON:0001135,1.02e-07,15;UBERON:0003104,2.14e-07,160;UBERON:0009142,2.14e-07,160;UBERON:0003914,2.57e-07,117 | |||
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|phase1_expression=12.3541297903979,13.7024335290229,9.02108186214215,17.0124607200322,7.59833860526389,9.59572376510406,17.7309914717817,1.26343974685366,0.261185628199839,1.22866968250754,1.39560233594486,3.27662058195258,0.791300934685361,0.247532705920093,0,34.9609076154923,12.0538905604795,14.6062018077475,18.5414463540393,0.492484232307152,0.816002764977012,0.313454721478088,0.85870796139317,3.42186062682211,5.64941878176613,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,6.50590474292219,7.01873074890245,6.0835537963546,0.795285947051099,3.89307896242109,6.14476311566441,13.747222642679,12.2968699970376,0.523916301990851,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.596287222100115,1.72046919021225,0.694281003215189,1.13061588384802,0.838998872419812,1.6507082516404,1.8809546988313,0.258416759169329,1.77883131343355,0.66944122552934,0.805658634218294,0,0,0.367663080345869,11.3419872703446,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,13.4182426957736,11.0168545148184,3.17782033951725,1.43418310374407,4.25602058638028,16.2596504041269,9.60740961567345,22.6934144543787,0,2.42479209725439,0.490385709340376,0.302714855289863,1.15235184896,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0,0.737005903870608,0.206651562351531,0,6.42894016124248,0,0,0.673344455816265,0.125118519871964,0,3.95079858792754,19.0022433395392,3.45547535485173,7.25965972224135,8.61070251306537,5.33893472046419,3.39091041855299,5.10154863343484,2.16410311400722,7.72921620136887,4.09457083929498,3.54430297706659,10.6206335625707,11.107086066741,2.11714766877288,0.80823028409406,10.6502877754984,9.67220142985347,3.73033303083073,0.966304265816484,3.00020732649918,1.72082757233402,1.46368447355514,1.98794652482228,1.51052125730374,1.14027160516907,3.02785021050754,0.36497735907583,3.12899064659632,16.724264393015,1.38134921352481,0.928735856063958,1.44375896333917,1.30137480043828,1.18009283054671,0.723033089650446,1.98529150918309,0.653638332277218,1.42362371466658,1.34831308160164,1.17732879075208,1.15424147083917,0,0,0.8231480226628,0,0,0,0,0,0.245976877086227,4.28919525746314,1.20725313949488,0,0.201057944823262,0.370353780634118,0.325808305310325,0,10.1031939417691,1.85488647960123,4.3441216867254,1.73239737313289,2.77791307545966,0.951270761172991,0.790204397959275,0.858486162094873,0,0,0,1.87467667973554,5.20744597416465,0.708875486211932,0.626909658919938,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0.616964956219941,0,0,0.224262168690721,0,0.22001485746285,6.72212921940444,0,0,11.1694008965646,6.24044621468197,0,0,0.532844358032199,3.14551586047925,0,0,0.325736184293735,4.26470338491055,3.16780749173372,6.02878754119172,9.58686804460323,16.9954085009497,0,0,0,6.46987109827273,0,0,4.63300181336253,3.90405012845728,3.22309733831812,0,0,0.215627574859517,0,0,0,0,0,1.91381625495949,0,0,0,1.10422342547226,0.500170521059677,1.62759014219841,14.7659311686873,30.5113570843147,8.83133524190034,5.50564650465752,0.601892199455438,2.27407504055985,4.1389228517002,9.29915837949611,4.05612170791747,0.868836144680828,0,0.343143423810856,0,0,0,0.909382714338778,4.99306318531491,8.46692821323105,9.42809669711352,8.74733247741956,27.2240291600081,5.89440086576224,10.2341449813341,23.9672342503975,4.45254199334973,6.32259744590888,8.5229628150301,0.739144404124282,1.03850885836724,2.90525946149898,0.362578348774867,5.41367469818869,0.368323955743585,4.24813458209045,4.37018803216121,4.85160335349869,0.451199612907412,5.31405826020462,0,2.92278449306521,4.53872004239366,0,0.170093705276516,4.75015015424707,1.54227252690289,0.541892875087706,4.01351819083883,0,0,0.671624264166535,1.09629938322967,0,2.05160100093111,4.26419039409617,1.30151357865721,0.412164046590889,1.55668090191184,0.165018999841176,0,1.95018073810956,4.82051789532479,0.290012154876366,0.308097234229289,0.614014698904518,0.551346289938122,0.859361958946189,0.580066775656914,0.511359764496605,0.712256285173899,2.14870389969272,2.30628080838127,0.510450849978337,0.30347334256665,16.269594225405,4.40737285562896,2.0911118104818,4.92853728281742,3.19383618190213,0.869932992075073,5.93037501132544,11.4499909393593,4.09374206295634,3.48017367190598,3.62197368455267,0.255897791311334,1.71175595213568,0.318203247925937,19.6237160049807,3.41757669408298,2.47083326762449,2.70968525395079,1.81964233415984,6.34041284692033,5.47635993110675,0.975267478179181,4.14312932373184,6.33900880540533,1.9109987597118,3.67654123079653,2.26016233240486,3.85955740482287,11.941901554342,8.76901770507525,1.15755106853338,1.31178950409327,4.261117916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| ||
|short_description=p8@TPM1 | |||
}} | }} |
Latest revision as of 11:50, 18 September 2015
Short description: | p8@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TPM1_5end |
Coexpression cluster: | C910_hepatic_smooth_Ewing_Adipocyte_left_Olfactory_umbilical |
Association with transcript: | -18bp_to_ENST00000558910_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.63e-15 | 43 |
smooth muscle myoblast | 4.63e-15 | 43 |
vascular associated smooth muscle cell | 6.72e-15 | 32 |
muscle precursor cell | 1.44e-10 | 58 |
myoblast | 1.44e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-10 | 58 |
mesodermal cell | 1.62e-10 | 121 |
muscle cell | 1.55e-09 | 55 |
electrically responsive cell | 3.04e-09 | 61 |
electrically active cell | 3.04e-09 | 61 |
fibroblast | 8.90e-09 | 76 |
mesothelial cell | 1.15e-07 | 19 |
preadipocyte | 9.69e-07 | 12 |