FFCP PHASE1:Hg19::chr16:80552480..80552487,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:80552480..80552487,-|id=chr16:80552480..80552487,-|ontology_enrichment_celltype=CL:0000064!6.35e-14!3;CL:0005012!6.35e-14!3;CL:0000067!6.35e-14!3;CL:0002304!6.35e-14!3;CL:0002322!7.20e-08!5;CL:0000075!8.76e-07!27|ontology_enrichment_celltype_v019=CL:0000342;3.30e-40;1!CL:0002565;3.30e-40;1!CL:0000064;1.22e-14;3!CL:0000067;1.22e-14;3!CL:0005012;1.22e-14;3!CL:0002304;1.22e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000075;6.72e-07;27|ontology_enrichment_celltype_v019_2=CL:0000342,3.30e-40,1;CL:0002565,3.30e-40,1;CL:0000064,1.22e-14,3;CL:0000067,1.22e-14,3;CL:0005012,1.22e-14,3;CL:0002304,1.22e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000075,6.62e-07,27|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000488!5.13e-18!4;UBERON:0001778!6.35e-14!3;UBERON:0001775!6.35e-14!3;UBERON:0007625!1.04e-13!11;UBERON:0002203!5.01e-12!6;UBERON:0001768!5.01e-12!6;UBERON:0001801!1.28e-10!14;UBERON:0000019!4.75e-10!19;UBERON:0000047!4.75e-10!19;UBERON:0004088!4.75e-10!19;UBERON:0003072!4.75e-10!19;UBERON:0003071!4.75e-10!19;UBERON:0004128!4.75e-10!19;UBERON:0002200!1.14e-09!11;UBERON:0006876!1.14e-09!11;UBERON:0000970!1.70e-09!20;UBERON:0002104!5.39e-09!21;UBERON:0001456!5.39e-09!21;UBERON:0000020!4.00e-08!23;UBERON:0001032!9.62e-08!24;UBERON:0004456!9.62e-08!24;UBERON:0002346!7.94e-07!90|ontology_enrichment_uberon_v019=UBERON:0000488;2.71e-40;4!UBERON:0002506;3.30e-40;1!UBERON:0001769;3.30e-40;1!UBERON:0007625;5.65e-33;11!UBERON:0002203;2.72e-27;6!UBERON:0001768;2.72e-27;6!UBERON:0002200;2.72e-27;6!UBERON:0001801;3.92e-26;14!UBERON:0000019;1.63e-19;19!UBERON:0000047;1.63e-19;19!UBERON:0004088;1.63e-19;19!UBERON:0010230;1.63e-19;19!UBERON:0000970;1.38e-18;20!UBERON:0002104;9.57e-18;21!UBERON:0001456;9.57e-18;21!UBERON:0000020;2.78e-16;23!UBERON:0001032;1.22e-15;24!UBERON:0004456;1.22e-15;24!UBERON:0006876;2.02e-15;11!UBERON:0001778;1.22e-14;3!UBERON:0001775;1.22e-14;3!UBERON:0010371;1.09e-12;31!UBERON:0002346;2.80e-11;4!UBERON:0000923;2.80e-11;4!UBERON:0010316;2.80e-11;4!UBERON:0005291;2.80e-11;4!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0002050;2.74e-09;5!UBERON:0005423;2.74e-09;5!UBERON:0001444;6.50e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.71e-40,4;UBERON:0002506,3.30e-40,1;UBERON:0001769,3.30e-40,1;UBERON:0007625,5.35e-33,11;UBERON:0002203,2.72e-27,6;UBERON:0001768,2.72e-27,6;UBERON:0002200,2.72e-27,6;UBERON:0001801,3.76e-26,14;UBERON:0000019,1.34e-18,20;UBERON:0000047,1.34e-18,20;UBERON:0010312,1.34e-18,20;UBERON:0004088,1.34e-18,20;UBERON:0010230,1.34e-18,20;UBERON:0003072,1.34e-18,20;UBERON:0004128,1.34e-18,20;UBERON:0003071,1.34e-18,20;UBERON:0000970,9.30e-18,21;UBERON:0002104,9.30e-18,21;UBERON:0001456,5.41e-17,22;UBERON:0000020,1.19e-15,24;UBERON:0001032,1.19e-15,24;UBERON:0004456,1.19e-15,24;UBERON:0006876,2.02e-15,11;UBERON:0001778,1.22e-14,3;UBERON:0001775,1.22e-14,3;UBERON:0005085,2.58e-12,31;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0001444,4.43e-08,49;UBERON:0002346,5.87e-08,86;UBERON:0000033,3.68e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16908161624845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,5.0103453096956,0.443458794925128,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0,0,0,2.43453850447661,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:80552480..80552487,- | |||
|id=chr16:80552480..80552487,- | |||
|ontology_enrichment_celltype=CL:0000064!6.35e-14!3;CL:0005012!6.35e-14!3;CL:0000067!6.35e-14!3;CL:0002304!6.35e-14!3;CL:0002322!7.20e-08!5;CL:0000075!8.76e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000342;3.30e-40;1!CL:0002565;3.30e-40;1!CL:0000064;1.22e-14;3!CL:0000067;1.22e-14;3!CL:0005012;1.22e-14;3!CL:0002304;1.22e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000075;6.72e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,3.30e-40,1;CL:0002565,3.30e-40,1;CL:0000064,1.22e-14,3;CL:0000067,1.22e-14,3;CL:0005012,1.22e-14,3;CL:0002304,1.22e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000075,6.62e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!5.13e-18!4;UBERON:0001778!6.35e-14!3;UBERON:0001775!6.35e-14!3;UBERON:0007625!1.04e-13!11;UBERON:0002203!5.01e-12!6;UBERON:0001768!5.01e-12!6;UBERON:0001801!1.28e-10!14;UBERON:0000019!4.75e-10!19;UBERON:0000047!4.75e-10!19;UBERON:0004088!4.75e-10!19;UBERON:0003072!4.75e-10!19;UBERON:0003071!4.75e-10!19;UBERON:0004128!4.75e-10!19;UBERON:0002200!1.14e-09!11;UBERON:0006876!1.14e-09!11;UBERON:0000970!1.70e-09!20;UBERON:0002104!5.39e-09!21;UBERON:0001456!5.39e-09!21;UBERON:0000020!4.00e-08!23;UBERON:0001032!9.62e-08!24;UBERON:0004456!9.62e-08!24;UBERON:0002346!7.94e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.71e-40;4!UBERON:0002506;3.30e-40;1!UBERON:0001769;3.30e-40;1!UBERON:0007625;5.65e-33;11!UBERON:0002203;2.72e-27;6!UBERON:0001768;2.72e-27;6!UBERON:0002200;2.72e-27;6!UBERON:0001801;3.92e-26;14!UBERON:0000019;1.63e-19;19!UBERON:0000047;1.63e-19;19!UBERON:0004088;1.63e-19;19!UBERON:0010230;1.63e-19;19!UBERON:0000970;1.38e-18;20!UBERON:0002104;9.57e-18;21!UBERON:0001456;9.57e-18;21!UBERON:0000020;2.78e-16;23!UBERON:0001032;1.22e-15;24!UBERON:0004456;1.22e-15;24!UBERON:0006876;2.02e-15;11!UBERON:0001778;1.22e-14;3!UBERON:0001775;1.22e-14;3!UBERON:0010371;1.09e-12;31!UBERON:0002346;2.80e-11;4!UBERON:0000923;2.80e-11;4!UBERON:0010316;2.80e-11;4!UBERON:0005291;2.80e-11;4!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0002050;2.74e-09;5!UBERON:0005423;2.74e-09;5!UBERON:0001444;6.50e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.71e-40,4;UBERON:0002506,3.30e-40,1;UBERON:0001769,3.30e-40,1;UBERON:0007625,5.35e-33,11;UBERON:0002203,2.72e-27,6;UBERON:0001768,2.72e-27,6;UBERON:0002200,2.72e-27,6;UBERON:0001801,3.76e-26,14;UBERON:0000019,1.34e-18,20;UBERON:0000047,1.34e-18,20;UBERON:0010312,1.34e-18,20;UBERON:0004088,1.34e-18,20;UBERON:0010230,1.34e-18,20;UBERON:0003072,1.34e-18,20;UBERON:0004128,1.34e-18,20;UBERON:0003071,1.34e-18,20;UBERON:0000970,9.30e-18,21;UBERON:0002104,9.30e-18,21;UBERON:0001456,5.41e-17,22;UBERON:0000020,1.19e-15,24;UBERON:0001032,1.19e-15,24;UBERON:0004456,1.19e-15,24;UBERON:0006876,2.02e-15,11;UBERON:0001778,1.22e-14,3;UBERON:0001775,1.22e-14,3;UBERON:0005085,2.58e-12,31;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0001444,4.43e-08,49;UBERON:0002346,5.87e-08,86;UBERON:0000033,3.68e-07,56 | |||
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|short_description=p@chr16:80552480..80552487,- | |||
}} |
Revision as of 11:40, 11 September 2013
Short description: | p@chr16:80552480..80552487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:80552480..80552487, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 3.30e-40 | 1 |
iris pigment epithelial cell | 3.30e-40 | 1 |
ciliated cell | 1.22e-14 | 3 |
ciliated epithelial cell | 1.22e-14 | 3 |
multi-ciliated epithelial cell | 1.22e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.22e-14 | 3 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
columnar/cuboidal epithelial cell | 6.62e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.71e-40 | 4 |
iris epithelium | 3.30e-40 | 1 |
iris | 3.30e-40 | 1 |
pigment epithelium of eye | 5.35e-33 | 11 |
vasculature of eye | 2.72e-27 | 6 |
uvea | 2.72e-27 | 6 |
vasculature of head | 2.72e-27 | 6 |
anterior segment of eyeball | 3.76e-26 | 14 |
camera-type eye | 1.34e-18 | 20 |
simple eye | 1.34e-18 | 20 |
immature eye | 1.34e-18 | 20 |
ocular region | 1.34e-18 | 20 |
eyeball of camera-type eye | 1.34e-18 | 20 |
optic cup | 1.34e-18 | 20 |
optic vesicle | 1.34e-18 | 20 |
eye primordium | 1.34e-18 | 20 |
eye | 9.30e-18 | 21 |
visual system | 9.30e-18 | 21 |
face | 5.41e-17 | 22 |
sense organ | 1.19e-15 | 24 |
sensory system | 1.19e-15 | 24 |
entire sense organ system | 1.19e-15 | 24 |
vasculature of organ | 2.02e-15 | 11 |
ciliary epithelium | 1.22e-14 | 3 |
ciliary body | 1.22e-14 | 3 |
ectodermal placode | 2.58e-12 | 31 |
cuboidal epithelium | 3.10e-11 | 4 |
transparent eye structure | 3.10e-11 | 4 |
simple cuboidal epithelium | 3.10e-11 | 4 |
cranial placode | 3.10e-11 | 4 |
lens of camera-type eye | 3.10e-11 | 4 |
epithelium of lens | 3.10e-11 | 4 |
lens placode | 3.10e-11 | 4 |
lens vesicle | 3.10e-11 | 4 |
subdivision of head | 4.43e-08 | 49 |
neurectoderm | 5.87e-08 | 86 |
head | 3.68e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.