FFCP PHASE1:Hg19::chr5:116258219..116258222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:116258219..116258222,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr5:116258219..116258222,+ | |description=CAGE_peak_at_chr5:116258219..116258222,+ | ||
|id=chr5:116258219..116258222,+ | |id=chr5:116258219..116258222,+ | ||
|ontology_enrichment_celltype=CL:0000342!7.45e-08!1;CL:0002565!7.45e-08!1 | |ontology_enrichment_celltype=CL:0000342!7.45e-08!1;CL:0002565!7.45e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0002543;6.78e-08;6!CL:0000039;5.08e-07;7!CL:0000586;5.08e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4;CL:0002543,6.34e-08,6;CL:0000039,5.08e-07,7;CL:0000586,5.08e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4 | |||
|ontology_enrichment_disease=DOID:3151!5.33e-08!1;DOID:3149!5.33e-08!1 | |ontology_enrichment_disease=DOID:3151!5.33e-08!1;DOID:3149!5.33e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002134!3.55e-08!1;UBERON:0005208!3.55e-08!1;UBERON:0005946!3.55e-08!1;UBERON:0005965!3.55e-08!1;UBERON:0002078!3.55e-08!1;UBERON:0000996!3.80e-08!1;UBERON:0000473!4.65e-08!8;UBERON:0002506!7.45e-08!1;UBERON:0001769!7.45e-08!1 | |ontology_enrichment_uberon=UBERON:0002134!3.55e-08!1;UBERON:0005208!3.55e-08!1;UBERON:0005946!3.55e-08!1;UBERON:0005965!3.55e-08!1;UBERON:0002078!3.55e-08!1;UBERON:0000996!3.80e-08!1;UBERON:0000473!4.65e-08!8;UBERON:0002506!7.45e-08!1;UBERON:0001769!7.45e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.21e-40;1!UBERON:0005208;2.21e-40;1!UBERON:0004145;2.21e-40;1!UBERON:0005946;2.21e-40;1!UBERON:0005965;2.21e-40;1!UBERON:0002078;2.21e-40;1!UBERON:0002081;5.69e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0003978;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.30e-40,1;UBERON:0005208,3.30e-40,1;UBERON:0005946,3.30e-40,1;UBERON:0005965,3.30e-40,1;UBERON:0002078,3.30e-40,1;UBERON:0002081,6.96e-21,2;UBERON:0002133,6.96e-21,2;UBERON:0010227,6.96e-21,2;UBERON:0003978,2.09e-14,3;UBERON:0009751,2.09e-14,3;UBERON:0004151,2.09e-14,3;UBERON:0000946,2.09e-14,3;UBERON:0002523,2.09e-14,3;UBERON:0005983,2.09e-14,3;UBERON:0004145,2.09e-14,3;UBERON:0002165,2.09e-14,3;UBERON:0002062,2.09e-14,3;UBERON:0007280,2.09e-14,3;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0004797,6.39e-07,7 | |||
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|short_description=p@chr5:116258219..116258222,+ | |short_description=p@chr5:116258219..116258222,+ | ||
}} | }} |
Latest revision as of 08:57, 30 July 2015
Short description: | p@chr5:116258219..116258222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:116258219..116258222, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
vein endothelial cell | 6.34e-08 | 6 |
germ line cell | 5.08e-07 | 7 |
germ cell | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.30e-40 | 1 |
right atrium valve | 3.30e-40 | 1 |
outflow tract of atrium | 3.30e-40 | 1 |
outflow part of right atrium | 3.30e-40 | 1 |
right cardiac atrium | 3.30e-40 | 1 |
cardiac atrium | 6.96e-21 | 2 |
atrioventricular valve | 6.96e-21 | 2 |
future cardiac atrium | 6.96e-21 | 2 |
valve | 2.09e-14 | 3 |
cardiac mesenchyme | 2.09e-14 | 3 |
cardiac chamber | 2.09e-14 | 3 |
cardial valve | 2.09e-14 | 3 |
tunica intima | 2.09e-14 | 3 |
heart layer | 2.09e-14 | 3 |
outflow tract | 2.09e-14 | 3 |
endocardium | 2.09e-14 | 3 |
endocardial cushion | 2.09e-14 | 3 |
presumptive endocardium | 2.09e-14 | 3 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
blood vessel layer | 6.39e-07 | 7 |