FFCP PHASE2:Hg19::chr18:47340320..47340479,+
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Short description: | p1@SCARNA17 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARNA17_5end |
Coexpression cluster: | C2461_CD8_CD4_Natural_Basophils_CD34_Mesenchymal_uterus |
Association with transcript: | 0bp_to_NR_003003, uc002ldy.1_5end |
EntrezGene: | SCARNA17 |
HGNC: | 32574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SCARNA17 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mature alpha-beta T cell | 5.09e-13 | 18 |
alpha-beta T cell | 5.09e-13 | 18 |
immature T cell | 5.09e-13 | 18 |
mature T cell | 5.09e-13 | 18 |
immature alpha-beta T cell | 5.09e-13 | 18 |
CD8-positive, alpha-beta T cell | 7.10e-09 | 11 |
T cell | 6.74e-08 | 25 |
pro-T cell | 6.74e-08 | 25 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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adult organism | 9.48e-31 | 114 |
neural tube | 1.28e-10 | 56 |
neural rod | 1.28e-10 | 56 |
future spinal cord | 1.28e-10 | 56 |
neural keel | 1.28e-10 | 56 |
regional part of nervous system | 8.94e-10 | 53 |
regional part of brain | 8.94e-10 | 53 |
regional part of forebrain | 1.85e-08 | 41 |
forebrain | 1.85e-08 | 41 |
anterior neural tube | 1.85e-08 | 41 |
Showing 1 to 10 of 23 entries