FFCP PHASE2:Hg19::chr2:166246839..166246855,+
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| Short description: | p6@SCN2A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_SCN2A_5end |
| Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
| Association with transcript: | -406bp_to_AL137498_5end |
| EntrezGene: | SCN2A |
| HGNC: | 10588 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p6@SCN2A |
|---|
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0.5
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3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 3.57e-20 | 22 |
| cerebellum | 8.63e-20 | 6 |
| rhombic lip | 8.63e-20 | 6 |
| regional part of nervous system | 4.39e-19 | 53 |
| regional part of brain | 4.39e-19 | 53 |
| neural tube | 4.26e-18 | 56 |
| neural rod | 4.26e-18 | 56 |
| future spinal cord | 4.26e-18 | 56 |
| neural keel | 4.26e-18 | 56 |
| cerebral cortex | 6.44e-18 | 25 |
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