FFCP PHASE2:Mm9::chr7:17509224..17509240,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p3@Calm2, p4@Calm1, p4@Calm3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Calm2_5end, CAGE_peak_4_at_Calm1_5end, CAGE_peak_4_at_Calm3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:60 |
| Association with transcript: | -46bp_to_ENSMUST00000173557_5end |
| EntrezGene: | 12313,12314,12315 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Calm2p4@Calm1p4@Calm3 |
|---|
0
50
100
150
200
250
300
350
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.47e-12 | 23 |
| neuroblast (sensu Vertebrata) | 1.47e-12 | 23 |
| ectodermal cell | 2.72e-11 | 44 |
| neurectodermal cell | 2.72e-11 | 44 |
| neural cell | 6.68e-11 | 43 |
| neuron | 6.83e-10 | 33 |
| neuronal stem cell | 6.83e-10 | 33 |
| neuroblast | 6.83e-10 | 33 |
| electrically signaling cell | 6.83e-10 | 33 |
| electrically responsive cell | 3.79e-08 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.95e-27 | 73 |
| neurectoderm | 2.38e-26 | 64 |
| neural plate | 2.38e-26 | 64 |
| presumptive neural plate | 2.38e-26 | 64 |
| regional part of nervous system | 8.48e-26 | 54 |
| nervous system | 9.22e-26 | 75 |
| neural tube | 1.04e-24 | 52 |
| neural rod | 1.04e-24 | 52 |
| future spinal cord | 1.04e-24 | 52 |
| neural keel | 1.04e-24 | 52 |
Showing 1 to 10 of 36 entries
