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{{f5samples
{{f5samples
|id=FF:11756-123H1
|DRA_sample_Accession=CAGE@SAMD00005641
|name=mesenchymal precursor cell - ovarian cancer left ovary, donor1
|accession_numbers=CAGE;DRX008555;DRR009427;DRZ000852;DRZ002237;DRZ012202;DRZ013587
|sample_id=11756
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474
|rna_tube_id=123H1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
|rna_box=123
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120
|rna_position=H1
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000273
|sample_cell_lot=SOC-19-01
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.64!43.01!SOX17;;chr1:170632285..170632309,+!p1@PRRX1!1.42!28.51!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.30!18.80!ZBED1;;chr8:11561684..11561751,+!p1@GATA4!1.27!17.52!GATA4;;chr11:46299199..46299233,+!p1@CREB3L1!1.20!75.67!CREB3L1;;chr21:36260773..36260804,-!p7@RUNX1!1.20!20.07!RUNX1;;chr2:114036488..114036504,-!p1@PAX8!1.19!14.66!PAX8;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.19!14.34!HOXC5;;chr1:170633262..170633285,+!p3@PRRX1!1.16!15.45!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!1.15!52.09!ZBTB38;;chr11:61520075..61520136,+!p1@C11orf9!1.13!26.28!C11orf9;;chr19:42636586..42636607,-!p1@POU2F2!1.12!33.45!POU2F2;;chr20:50179368..50179392,-!p2@NFATC2!1.12!15.93!NFATC2;;chr3:141087454..141087465,+!p19@ZBTB38!1.03!9.72!ZBTB38;;chr8:106330656..106330684,+!p1@ZFPM2!1.01!24.37!ZFPM2;;chr10:94449703..94449718,+!p1@HHEX!1.00!35.68!HHEX;;chr2:19558373..19558392,-!p1@OSR1!1.00!25.33!OSR1;;chr16:86544113..86544145,+!p1@FOXF1!1.00!11.31!FOXF1;;chr6:134210243..134210257,+!p1@TCF21!0.99!8.76!TCF21;;chr1:170633348..170633399,+!p2@PRRX1!0.98!11.79!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!0.97!102.59!MLLT11;;chr11:65686732..65686756,+!p2@DRAP1!0.97!35.84!DRAP1;;chr11:32457075..32457095,-!p1@WT1!0.97!8.28!WT1;;chr12:66218598..66218645,+!p2@HMGA2!0.96!38.55!HMGA2;;chr1:170632115..170632136,+!p9@PRRX1!0.95!7.96!PRRX1;;chr19:45971246..45971265,+!p1@FOSB!0.90!135.56!FOSB;;chr1:151032922..151032951,+!p2@MLLT11!0.90!11.95!MLLT11;;chr12:54402745..54402788,+!p1@HOXC8!0.90!7.01!HOXC8;;chr7:44143925..44143970,+!p1@AEBP1!0.89!157.39!AEBP1;;chr1:170632137..170632172,+!p10@PRRX1!0.89!6.85!PRRX1;;chr15:83953397..83953425,-!p1@BNC1!0.88!7.65!BNC1;;chr12:66218255..66218304,+!p3@HMGA2!0.87!18.16!HMGA2;;chr17:1959369..1959388,+!p2@HIC1!0.87!17.52!HIC1;;chr12:66218183..66218209,+!p4@HMGA2!0.87!12.90!HMGA2;;chr8:106330696..106330719,+!p2@ZFPM2!0.85!7.96!ZFPM2;;chr2:102091566..102091581,-!p1@RFX8!0.85!6.05!RFX8;;chr11:46299539..46299620,+!p2@CREB3L1!0.84!10.35!CREB3L1;;chr11:65686802..65686818,+!p6@DRAP1!0.83!10.51!DRAP1;;chr12:54394309..54394336,+!p2@HOXC9!0.83!5.73!HOXC9;;chr3:25470156..25470227,+!p2@RARB!0.83!5.73!RARB;;chr20:50721803..50721857,-!p2@ZFP64!0.82!9.08!ZFP64;;chr2:239756671..239756732,+!p1@TWIST2!0.80!18.32!TWIST2;;chr8:72756267..72756296,-!p4@MSC!0.80!7.96!MSC;;chr18:19749386..19749404,+!p2@GATA6!0.80!7.81!GATA6;;chr9:16705069..16705086,-!p3@BNC2!0.80!5.26!BNC2;;chr12:115122318..115122331,-!p2@TBX3!0.80!5.26!TBX3;;chr12:54447599..54447630,+!p3@HOXC4!0.79!6.53!HOXC4;;chr3:141105705..141105770,+!p4@ZBTB38!0.79!6.37!ZBTB38;;chr19:46801639..46801699,+!p1@HIF3A!0.79!5.10!HIF3A;;chr8:72756667..72756736,-!p2@MSC!0.78!8.28!MSC;;chr8:49833948..49833973,-!p2@SNAI2!0.77!34.41!SNAI2;;chr17:46622070..46622109,-!p1@HOXB2!0.77!11.63!HOXB2;;chr17:46622114..46622138,-!p4@HOXB2!0.77!7.81!HOXB2;;chr8:77593750..77593757,+!p3@ZFHX4!0.77!4.94!ZFHX4;;chr14:62162258..62162269,+!p2@HIF1A!0.76!50.18!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.76!26.92!HIF1A;;chr18:19749541..19749557,+!p1@GATA6!0.76!16.09!GATA6;;chr2:239756739..239756755,+!p2@TWIST2!0.76!8.44!TWIST2;;chr3:141121847..141121868,+!p5@ZBTB38!0.76!7.49!ZBTB38;;chr7:44143997..44144008,+!p3@AEBP1!0.75!6.05!AEBP1;;chr12:115121962..115121987,-!p1@TBX3!0.74!41.74!TBX3;;chr1:170632959..170632987,+!p4@PRRX1!0.74!4.94!PRRX1;;chr1:170632051..170632081,+!p16@PRRX1!0.74!4.46!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.46!PRRX1;;chr7:44143978..44143989,+!p2@AEBP1!0.73!8.60!AEBP1;;chr7:26191809..26191890,+!p1@NFE2L3!0.72!23.42!NFE2L3;;chr8:72756637..72756664,-!p3@MSC!0.72!4.94!MSC;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.72!4.30!HOXC5;;chr3:25469815..25469866,+!p3@RARB!0.72!4.30!RARB;;chr6:28321971..28321995,-!p1@ZNF323!0.71!4.14!ZNF323;;chr7:1577899..1577943,+!p3@MAFK!0.71!4.14!MAFK;;chr12:66218836..66218888,+!p1@HMGA2!0.70!42.53!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!0.70!6.05!HMGA2;;chr12:54447637..54447659,+!p4@HOXC4!0.70!3.98!HOXC4;;chr12:66218904..66218913,+!p11@HMGA2!0.70!3.98!HMGA2;;chr17:1958388..1958404,+!p1@HIC1!0.68!27.72!HIC1;;chr20:6748325..6748352,+!p1@BMP2!0.68!5.73!BMP2;;chr2:176994408..176994492,+!p1@HOXD8!0.68!3.82!HOXD8;;chr12:54393880..54393962,+!p1@HOXC9!0.68!3.82!HOXC9;;chr15:96874927..96874938,+!p8@NR2F2!0.67!8.60!NR2F2;;chr3:25469724..25469773,+!p1@RARB!0.67!5.58!RARB;;chr1:151032739..151032748,+!p6@MLLT11!0.67!4.78!MLLT11;;chr1:170632647..170632659,+!p17@PRRX1!0.67!3.66!PRRX1;;chr12:66218923..66218934,+!p14@HMGA2!0.67!3.66!HMGA2;;chr9:35732647..35732678,+!p2@CREB3!0.66!22.78!CREB3;;chr2:66662281..66662308,+!p1@MEIS1!0.66!13.86!MEIS1;;chr10:64576105..64576133,-!p1@EGR2!0.66!8.12!EGR2;;chr8:49833978..49833996,-!p1@SNAI2!0.65!84.59!SNAI2;;chr12:124873357..124873401,-!p1@NCOR2!0.65!46.51!NCOR2;;chr2:145275162..145275202,-!p2@ZEB2!0.65!23.74!ZEB2;;chr8:72756063..72756125,-!p1@MSC!0.65!7.65!MSC;;chr12:26277817..26277863,-!p2@BHLHE41!0.65!4.94!BHLHE41;;chr10:6380910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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134
|sample_tissue=ovary
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Line 67: Line 40:
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|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.26588509186787e-227!GO:0005737;cytoplasm;4.08742258204172e-196!GO:0043226;organelle;3.17823094100563e-174!GO:0043229;intracellular organelle;9.52513469492441e-174!GO:0043231;intracellular membrane-bound organelle;2.89002476657473e-171!GO:0043227;membrane-bound organelle;5.22250518672556e-171!GO:0044444;cytoplasmic part;3.03408283052211e-138!GO:0044422;organelle part;4.62747716638209e-136!GO:0044446;intracellular organelle part;1.79100176604957e-134!GO:0032991;macromolecular complex;6.22069398214022e-90!GO:0005515;protein binding;1.65631334505527e-88!GO:0044238;primary metabolic process;1.78319959641154e-78!GO:0030529;ribonucleoprotein complex;7.9719518238201e-77!GO:0044237;cellular metabolic process;2.78895098118655e-76!GO:0043170;macromolecule metabolic process;5.21663898277547e-73!GO:0043233;organelle lumen;2.10421415457499e-64!GO:0031974;membrane-enclosed lumen;2.10421415457499e-64!GO:0044428;nuclear part;2.78785737226224e-64!GO:0005634;nucleus;3.32725212868417e-60!GO:0003723;RNA binding;3.36892109106001e-60!GO:0031090;organelle membrane;6.07513330588465e-54!GO:0005739;mitochondrion;4.06500499176219e-53!GO:0019538;protein metabolic process;2.04943114812275e-52!GO:0016043;cellular component organization and biogenesis;5.64924139062676e-50!GO:0044260;cellular macromolecule metabolic process;3.74345707254359e-46!GO:0044267;cellular protein metabolic process;5.44907404196542e-46!GO:0033036;macromolecule localization;9.93376980422387e-46!GO:0015031;protein transport;1.08223065574067e-45!GO:0043234;protein complex;3.22203478005185e-45!GO:0005840;ribosome;3.78542032167819e-45!GO:0006412;translation;6.63971540180389e-45!GO:0006396;RNA processing;1.50287771379854e-42!GO:0008104;protein localization;1.5543171614889e-42!GO:0045184;establishment of protein localization;1.81826565777323e-42!GO:0005829;cytosol;3.84085754061814e-42!GO:0003735;structural constituent of ribosome;1.23789511793181e-39!GO:0031981;nuclear lumen;4.07614584854469e-39!GO:0009058;biosynthetic process;2.94170493315972e-38!GO:0043283;biopolymer metabolic process;4.13681720183102e-38!GO:0044429;mitochondrial part;1.43248577394077e-37!GO:0031967;organelle envelope;2.23376149842003e-37!GO:0031975;envelope;5.55000891650598e-37!GO:0009059;macromolecule biosynthetic process;1.47617767647485e-36!GO:0046907;intracellular transport;2.53478465872513e-35!GO:0016071;mRNA metabolic process;1.69334733837696e-34!GO:0044249;cellular biosynthetic process;2.50934278767197e-34!GO:0033279;ribosomal subunit;2.60777978342941e-34!GO:0008380;RNA splicing;2.67765304765927e-34!GO:0010467;gene expression;4.53734447884054e-32!GO:0043228;non-membrane-bound organelle;1.14360167630436e-30!GO:0043232;intracellular non-membrane-bound organelle;1.14360167630436e-30!GO:0006996;organelle organization and biogenesis;1.29250174335e-30!GO:0006397;mRNA processing;1.29250174335e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.91848362972487e-30!GO:0006886;intracellular protein transport;5.47703604405234e-29!GO:0065003;macromolecular complex assembly;1.90200069348551e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.89718298693877e-27!GO:0005740;mitochondrial envelope;9.61129589812503e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.23679847167901e-25!GO:0022607;cellular component assembly;2.94178641236365e-25!GO:0005783;endoplasmic reticulum;3.61137795125295e-25!GO:0012505;endomembrane system;3.76585303693905e-25!GO:0031966;mitochondrial membrane;4.67990303873653e-24!GO:0005654;nucleoplasm;1.24901094635872e-23!GO:0005681;spliceosome;1.56732675220912e-23!GO:0019866;organelle inner membrane;2.52219015977823e-23!GO:0051641;cellular localization;5.87788816049788e-23!GO:0051649;establishment of cellular localization;6.96519181183661e-23!GO:0006259;DNA metabolic process;3.3798133120357e-22!GO:0044445;cytosolic part;8.16659905338254e-22!GO:0007049;cell cycle;9.77191612043891e-22!GO:0006119;oxidative phosphorylation;1.22529206220169e-21!GO:0006457;protein folding;1.50352353180306e-21!GO:0005743;mitochondrial inner membrane;1.81855988887311e-21!GO:0016462;pyrophosphatase activity;1.82665845071227e-21!GO:0000166;nucleotide binding;2.11446960458474e-21!GO:0005794;Golgi apparatus;2.26384814156681e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.29089409545281e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;3.63737312978934e-21!GO:0017111;nucleoside-triphosphatase activity;1.17358445931666e-20!GO:0044451;nucleoplasm part;4.30792851283982e-19!GO:0048770;pigment granule;4.96495738918461e-19!GO:0042470;melanosome;4.96495738918461e-19!GO:0044432;endoplasmic reticulum part;7.74151843773503e-19!GO:0044455;mitochondrial membrane part;1.15371601353764e-18!GO:0015934;large ribosomal subunit;1.68217770348855e-18!GO:0008134;transcription factor binding;3.71904000818684e-17!GO:0022618;protein-RNA complex assembly;5.63441953173151e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.34145793420198e-17!GO:0015935;small ribosomal subunit;9.8655807001856e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.40821236907102e-16!GO:0043285;biopolymer catabolic process;5.23573881051568e-16!GO:0022402;cell cycle process;5.64587829128201e-16!GO:0005730;nucleolus;6.06457589835184e-16!GO:0019941;modification-dependent protein catabolic process;8.37576913132883e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.37576913132883e-16!GO:0048193;Golgi vesicle transport;8.58941663644282e-16!GO:0005746;mitochondrial respiratory chain;1.02846847453873e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.0935132110923e-15!GO:0044257;cellular protein catabolic process;1.19658453563529e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.42320863888334e-15!GO:0006512;ubiquitin cycle;1.42597421945341e-15!GO:0030163;protein catabolic process;1.42597421945341e-15!GO:0032553;ribonucleotide binding;1.90960642220642e-15!GO:0032555;purine ribonucleotide binding;1.90960642220642e-15!GO:0016874;ligase activity;2.66480565877762e-15!GO:0044265;cellular macromolecule catabolic process;2.81034379471254e-15!GO:0017076;purine nucleotide binding;2.82017025496086e-15!GO:0009057;macromolecule catabolic process;5.79291345603642e-15!GO:0003676;nucleic acid binding;5.90433499908579e-15!GO:0051082;unfolded protein binding;6.88422399495708e-15!GO:0006605;protein targeting;9.36738029397963e-15!GO:0016192;vesicle-mediated transport;1.89870211541273e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.54681693495883e-14!GO:0003954;NADH dehydrogenase activity;2.54681693495883e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.54681693495883e-14!GO:0031980;mitochondrial lumen;3.51878958575284e-14!GO:0005759;mitochondrial matrix;3.51878958575284e-14!GO:0051186;cofactor metabolic process;4.34592704371958e-14!GO:0008135;translation factor activity, nucleic acid binding;5.86964973125462e-14!GO:0043412;biopolymer modification;6.4128318662757e-14!GO:0000278;mitotic cell cycle;1.15977823061381e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.63226366685132e-13!GO:0012501;programmed cell death;1.88650096652236e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.50174609334873e-13!GO:0006915;apoptosis;4.97464352171245e-13!GO:0005793;ER-Golgi intermediate compartment;5.7420126589521e-13!GO:0005789;endoplasmic reticulum membrane;7.30451468236736e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.02516343750231e-12!GO:0000375;RNA splicing, via transesterification reactions;1.02516343750231e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.02516343750231e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.44671114623018e-12!GO:0045271;respiratory chain complex I;1.44671114623018e-12!GO:0005747;mitochondrial respiratory chain complex I;1.44671114623018e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.44671114623018e-12!GO:0042773;ATP synthesis coupled electron transport;1.44671114623018e-12!GO:0006464;protein modification process;1.44671114623018e-12!GO:0044248;cellular catabolic process;1.4549220138381e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.57140781406381e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.57320423071414e-12!GO:0048523;negative regulation of cellular process;2.3787003979935e-12!GO:0006974;response to DNA damage stimulus;3.50676246837544e-12!GO:0005635;nuclear envelope;3.54847792868887e-12!GO:0016070;RNA metabolic process;3.54847792868887e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.09515278344489e-12!GO:0005761;mitochondrial ribosome;4.23037267898254e-12!GO:0000313;organellar ribosome;4.23037267898254e-12!GO:0008219;cell death;7.02289487440202e-12!GO:0016265;death;7.02289487440202e-12!GO:0005524;ATP binding;8.80276075479425e-12!GO:0032559;adenyl ribonucleotide binding;1.60888872798825e-11!GO:0009055;electron carrier activity;1.88423655865797e-11!GO:0000074;regulation of progression through cell cycle;1.88423655865797e-11!GO:0051726;regulation of cell cycle;2.42677648686617e-11!GO:0030554;adenyl nucleotide binding;3.06698119807142e-11!GO:0031965;nuclear membrane;3.14966933116362e-11!GO:0003743;translation initiation factor activity;4.39421458988779e-11!GO:0003712;transcription cofactor activity;4.4709959384543e-11!GO:0006732;coenzyme metabolic process;5.33048341452551e-11!GO:0042254;ribosome biogenesis and assembly;6.92450628350277e-11!GO:0009259;ribonucleotide metabolic process;7.75993419413378e-11!GO:0006413;translational initiation;9.52637490632852e-11!GO:0005694;chromosome;1.01633519617702e-10!GO:0048519;negative regulation of biological process;1.06153758924053e-10!GO:0016604;nuclear body;1.47073272011538e-10!GO:0006163;purine nucleotide metabolic process;2.03923386162222e-10!GO:0043687;post-translational protein modification;2.08608977718305e-10!GO:0051301;cell division;2.87871033183366e-10!GO:0044453;nuclear membrane part;3.24929872394886e-10!GO:0009150;purine ribonucleotide metabolic process;3.54593176908692e-10!GO:0006446;regulation of translational initiation;4.95458013631749e-10!GO:0000087;M phase of mitotic cell cycle;8.504668780762e-10!GO:0044427;chromosomal part;8.75943614321773e-10!GO:0005768;endosome;1.00986523998557e-09!GO:0006281;DNA repair;1.07091557646836e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.13554725118263e-09!GO:0008639;small protein conjugating enzyme activity;1.1991086761685e-09!GO:0051276;chromosome organization and biogenesis;1.20545290819732e-09!GO:0006164;purine nucleotide biosynthetic process;1.24851466581091e-09!GO:0007067;mitosis;1.31858487080339e-09!GO:0016887;ATPase activity;1.42839978485962e-09!GO:0044431;Golgi apparatus part;1.50169544481875e-09!GO:0042623;ATPase activity, coupled;1.50755095223554e-09!GO:0003924;GTPase activity;1.70698272200039e-09!GO:0009260;ribonucleotide biosynthetic process;1.71305219091878e-09!GO:0006913;nucleocytoplasmic transport;1.71710891938476e-09!GO:0050794;regulation of cellular process;1.85466847736758e-09!GO:0019787;small conjugating protein ligase activity;2.00735239980078e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.08359473371328e-09!GO:0004842;ubiquitin-protein ligase activity;2.13042460375428e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.81827969249161e-09!GO:0051169;nuclear transport;3.4325467940975e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.66934228075084e-09!GO:0043067;regulation of programmed cell death;4.25972951437834e-09!GO:0009141;nucleoside triphosphate metabolic process;4.53743401191175e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.17758920678357e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.28769552330649e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.52301015182351e-09!GO:0022403;cell cycle phase;5.56895743344753e-09!GO:0043069;negative regulation of programmed cell death;6.05890242073373e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;6.6181236423731e-09!GO:0042981;regulation of apoptosis;6.93277684908036e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.20010765712988e-09!GO:0009144;purine nucleoside triphosphate metabolic process;7.20010765712988e-09!GO:0009719;response to endogenous stimulus;9.6373087982413e-09!GO:0051246;regulation of protein metabolic process;1.10458698310922e-08!GO:0016607;nuclear speck;1.58603377324049e-08!GO:0005788;endoplasmic reticulum lumen;1.84828444691172e-08!GO:0008565;protein transporter activity;1.84828444691172e-08!GO:0043066;negative regulation of apoptosis;1.93380152884381e-08!GO:0015986;ATP synthesis coupled proton transport;1.96215745374183e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.96215745374183e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.96215745374183e-08!GO:0006260;DNA replication;2.0111494578499e-08!GO:0006323;DNA packaging;2.01823625656232e-08!GO:0006916;anti-apoptosis;2.05055952709033e-08!GO:0004386;helicase activity;2.08052548444327e-08!GO:0006461;protein complex assembly;2.21868277667613e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.30486435183846e-08!GO:0016881;acid-amino acid ligase activity;2.34105365587145e-08!GO:0030120;vesicle coat;2.42747448765098e-08!GO:0030662;coated vesicle membrane;2.42747448765098e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.15011737547573e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.15011737547573e-08!GO:0006366;transcription from RNA polymerase II promoter;3.64615498465758e-08!GO:0046034;ATP metabolic process;3.65570006040174e-08!GO:0009060;aerobic respiration;3.94238931715898e-08!GO:0031988;membrane-bound vesicle;4.05668119224215e-08!GO:0016023;cytoplasmic membrane-bound vesicle;4.63958102218902e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.94414355610871e-08!GO:0009056;catabolic process;6.05575865581688e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.25156778490723e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.25156778490723e-08!GO:0017038;protein import;6.92195107910955e-08!GO:0008026;ATP-dependent helicase activity;6.95873101762547e-08!GO:0019829;cation-transporting ATPase activity;7.62722785592967e-08!GO:0045333;cellular respiration;9.1883539301719e-08!GO:0006399;tRNA metabolic process;1.20764795816359e-07!GO:0000139;Golgi membrane;1.39488136787006e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.64102786430476e-07!GO:0005643;nuclear pore;1.64851666432474e-07!GO:0015630;microtubule cytoskeleton;1.98096708162122e-07!GO:0006754;ATP biosynthetic process;2.85687246896726e-07!GO:0006753;nucleoside phosphate metabolic process;2.85687246896726e-07!GO:0006099;tricarboxylic acid cycle;3.14764636917854e-07!GO:0046356;acetyl-CoA catabolic process;3.14764636917854e-07!GO:0031252;leading edge;4.00474798723689e-07!GO:0044440;endosomal part;4.1485895739762e-07!GO:0010008;endosome membrane;4.1485895739762e-07!GO:0006333;chromatin assembly or disassembly;4.19404057187168e-07!GO:0065002;intracellular protein transport across a membrane;4.71116628095641e-07!GO:0051188;cofactor biosynthetic process;4.71492360439213e-07!GO:0005525;GTP binding;4.94250420784821e-07!GO:0065004;protein-DNA complex assembly;5.34419292281898e-07!GO:0000785;chromatin;5.70460550472164e-07!GO:0048475;coated membrane;5.72509520688894e-07!GO:0030117;membrane coat;5.72509520688894e-07!GO:0031982;vesicle;5.94796718979462e-07!GO:0009117;nucleotide metabolic process;6.26992448768349e-07!GO:0006364;rRNA processing;6.37844471798316e-07!GO:0000279;M phase;6.50460089778176e-07!GO:0051187;cofactor catabolic process;6.74770566884455e-07!GO:0031410;cytoplasmic vesicle;8.91291607593584e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.11311936173108e-07!GO:0004812;aminoacyl-tRNA ligase activity;9.11311936173108e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.11311936173108e-07!GO:0016072;rRNA metabolic process;1.12457193262676e-06!GO:0007005;mitochondrion organization and biogenesis;1.15521632887767e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.28057601810615e-06!GO:0006084;acetyl-CoA metabolic process;1.29235817547947e-06!GO:0043038;amino acid activation;1.42519173297382e-06!GO:0006418;tRNA aminoacylation for protein translation;1.42519173297382e-06!GO:0043039;tRNA aminoacylation;1.42519173297382e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.63747453138476e-06!GO:0016787;hydrolase activity;1.66026713803003e-06!GO:0045786;negative regulation of progression through cell cycle;1.92111813067421e-06!GO:0006403;RNA localization;1.97560197138676e-06!GO:0032446;protein modification by small protein conjugation;2.00160884590151e-06!GO:0050789;regulation of biological process;2.00160884590151e-06!GO:0009109;coenzyme catabolic process;2.00262949446456e-06!GO:0005770;late endosome;2.13482239484911e-06!GO:0005798;Golgi-associated vesicle;2.14212586366726e-06!GO:0050657;nucleic acid transport;2.16604221975105e-06!GO:0051236;establishment of RNA localization;2.16604221975105e-06!GO:0050658;RNA transport;2.16604221975105e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.27995460460587e-06!GO:0006793;phosphorus metabolic process;2.5089342365898e-06!GO:0006796;phosphate metabolic process;2.5089342365898e-06!GO:0046930;pore complex;2.53179789556186e-06!GO:0000245;spliceosome assembly;2.9840456693273e-06!GO:0005769;early endosome;3.1247446219714e-06!GO:0016567;protein ubiquitination;3.38484597071188e-06!GO:0003714;transcription corepressor activity;3.67151553674844e-06!GO:0048522;positive regulation of cellular process;3.80973460912966e-06!GO:0030036;actin cytoskeleton organization and biogenesis;3.92693213869279e-06!GO:0003697;single-stranded DNA binding;4.26625272796863e-06!GO:0006613;cotranslational protein targeting to membrane;5.35076819566548e-06!GO:0045259;proton-transporting ATP synthase complex;5.47271826292058e-06!GO:0032561;guanyl ribonucleotide binding;5.57816321974291e-06!GO:0019001;guanyl nucleotide binding;5.57816321974291e-06!GO:0016740;transferase activity;5.8832734844344e-06!GO:0016491;oxidoreductase activity;6.16336124452517e-06!GO:0005667;transcription factor complex;6.5160244730008e-06!GO:0043566;structure-specific DNA binding;6.64524666021398e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.86245828514585e-06!GO:0051170;nuclear import;8.10332883691182e-06!GO:0031324;negative regulation of cellular metabolic process;8.28372548230393e-06!GO:0009108;coenzyme biosynthetic process;8.96078155999293e-06!GO:0004298;threonine endopeptidase activity;9.16904644659233e-06!GO:0016853;isomerase activity;9.56796221788063e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.01069871438441e-05!GO:0006752;group transfer coenzyme metabolic process;1.06207472614357e-05!GO:0016310;phosphorylation;1.11967454065226e-05!GO:0005813;centrosome;1.1973368078408e-05!GO:0007010;cytoskeleton organization and biogenesis;1.28907729075687e-05!GO:0007243;protein kinase cascade;1.32582304310119e-05!GO:0006334;nucleosome assembly;1.39716586085579e-05!GO:0006606;protein import into nucleus;1.56660833690519e-05!GO:0016564;transcription repressor activity;1.56669998721059e-05!GO:0045454;cell redox homeostasis;1.83109827479948e-05!GO:0003724;RNA helicase activity;1.87910495735435e-05!GO:0000151;ubiquitin ligase complex;1.94057663261237e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.94344133266948e-05!GO:0016563;transcription activator activity;2.21927172002999e-05!GO:0005773;vacuole;2.46580516996519e-05!GO:0016568;chromatin modification;2.54217344524244e-05!GO:0008654;phospholipid biosynthetic process;2.58386796585975e-05!GO:0030867;rough endoplasmic reticulum membrane;2.72439870729759e-05!GO:0003713;transcription coactivator activity;2.87041466358149e-05!GO:0005815;microtubule organizing center;3.05389786460699e-05!GO:0031497;chromatin assembly;3.62304527497598e-05!GO:0016859;cis-trans isomerase activity;3.81496780403068e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.31205889493513e-05!GO:0030029;actin filament-based process;4.39413427747537e-05!GO:0051028;mRNA transport;4.94791611718473e-05!GO:0006612;protein targeting to membrane;5.1996922947806e-05!GO:0051789;response to protein stimulus;5.52979984240414e-05!GO:0006986;response to unfolded protein;5.52979984240414e-05!GO:0009892;negative regulation of metabolic process;6.56936262808094e-05!GO:0043623;cellular protein complex assembly;6.57064288732816e-05!GO:0005762;mitochondrial large ribosomal subunit;6.82881341582006e-05!GO:0000315;organellar large ribosomal subunit;6.82881341582006e-05!GO:0031968;organelle outer membrane;7.39392893418258e-05!GO:0016779;nucleotidyltransferase activity;8.12806946499759e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.36641215010379e-05!GO:0030133;transport vesicle;8.41270769394141e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.41379542993397e-05!GO:0007264;small GTPase mediated signal transduction;9.62411725312734e-05!GO:0005819;spindle;0.000104679101419633!GO:0005905;coated pit;0.000117822687430522!GO:0051427;hormone receptor binding;0.000119582785856909!GO:0019867;outer membrane;0.000141328584379286!GO:0019899;enzyme binding;0.000145037826702272!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00016537490653538!GO:0005048;signal sequence binding;0.000183708882967379!GO:0000323;lytic vacuole;0.000191342807771124!GO:0005764;lysosome;0.000191342807771124!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000192612442476299!GO:0008361;regulation of cell size;0.000201502437279416!GO:0043021;ribonucleoprotein binding;0.000218899728030209!GO:0035257;nuclear hormone receptor binding;0.000253846067088238!GO:0008092;cytoskeletal protein binding;0.000254763415340571!GO:0005885;Arp2/3 protein complex;0.000254763415340571!GO:0015980;energy derivation by oxidation of organic compounds;0.000256996933419493!GO:0051329;interphase of mitotic cell cycle;0.000269934962372457!GO:0016049;cell growth;0.000270105329142935!GO:0006091;generation of precursor metabolites and energy;0.000274654376868803!GO:0005791;rough endoplasmic reticulum;0.000317903118960822!GO:0004576;oligosaccharyl transferase activity;0.000330394257512085!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000357694243228271!GO:0009165;nucleotide biosynthetic process;0.000368532142804328!GO:0006950;response to stress;0.000382820831110451!GO:0016044;membrane organization and biogenesis;0.000392090279042536!GO:0008250;oligosaccharyl transferase complex;0.000412630026850825!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000440719566096234!GO:0005741;mitochondrial outer membrane;0.000440719566096234!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000443414742405615!GO:0001726;ruffle;0.000480528777146138!GO:0016126;sterol biosynthetic process;0.000499246644849192!GO:0016481;negative regulation of transcription;0.000517143926938069!GO:0051325;interphase;0.000521296270497683!GO:0007051;spindle organization and biogenesis;0.000529094848512571!GO:0018196;peptidyl-asparagine modification;0.000536845993040361!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000536845993040361!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000585438322387844!GO:0008047;enzyme activator activity;0.000592531135009002!GO:0001558;regulation of cell growth;0.000630680075682712!GO:0008186;RNA-dependent ATPase activity;0.000647467138126377!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000722772440741938!GO:0048518;positive regulation of biological process;0.000722772440741938!GO:0016363;nuclear matrix;0.000752882077042705!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000831022718439049!GO:0030663;COPI coated vesicle membrane;0.000831022718439049!GO:0030126;COPI vesicle coat;0.000831022718439049!GO:0051920;peroxiredoxin activity;0.000858204509302304!GO:0048468;cell development;0.000887078931211812!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000906675626331358!GO:0030659;cytoplasmic vesicle membrane;0.000907191475382471!GO:0000075;cell cycle checkpoint;0.000911105223823482!GO:0065007;biological regulation;0.000968542257924915!GO:0003899;DNA-directed RNA polymerase activity;0.00105426008634765!GO:0000314;organellar small ribosomal subunit;0.00111381502783525!GO:0005763;mitochondrial small ribosomal subunit;0.00111381502783525!GO:0042802;identical protein binding;0.001160815293719!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00120047780091923!GO:0006261;DNA-dependent DNA replication;0.00132116527958754!GO:0009967;positive regulation of signal transduction;0.00135464065005262!GO:0048500;signal recognition particle;0.00140353852425944!GO:0016197;endosome transport;0.00141110115999862!GO:0065009;regulation of a molecular function;0.0014387712526884!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0014506714194861!GO:0031072;heat shock protein binding;0.00146183483836994!GO:0031901;early endosome membrane;0.00146913981430516!GO:0030658;transport vesicle membrane;0.00152910073276482!GO:0004004;ATP-dependent RNA helicase activity;0.00176361078219266!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00176932365655151!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00176932365655151!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00176932365655151!GO:0043681;protein import into mitochondrion;0.00177244382951727!GO:0008632;apoptotic program;0.00178486296827744!GO:0030027;lamellipodium;0.00180316604549774!GO:0007050;cell cycle arrest;0.0019932569356717!GO:0008243;plasminogen activator activity;0.00200390296946539!GO:0048471;perinuclear region of cytoplasm;0.00205844941809651!GO:0046474;glycerophospholipid biosynthetic process;0.00205934212454556!GO:0044433;cytoplasmic vesicle part;0.00213868436742675!GO:0044262;cellular carbohydrate metabolic process;0.00214039232489606!GO:0030137;COPI-coated vesicle;0.00214186296232653!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00215544997792497!GO:0035258;steroid hormone receptor binding;0.00218239435066838!GO:0030134;ER to Golgi transport vesicle;0.00239056545408108!GO:0006414;translational elongation;0.00239056545408108!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00239135413512148!GO:0019843;rRNA binding;0.00248418650446284!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00251732806610349!GO:0006839;mitochondrial transport;0.00257776506374005!GO:0051168;nuclear export;0.00261853223163278!GO:0006891;intra-Golgi vesicle-mediated transport;0.00268243161264212!GO:0006383;transcription from RNA polymerase III promoter;0.00268243161264212!GO:0006626;protein targeting to mitochondrion;0.00270468463447804!GO:0030176;integral to endoplasmic reticulum membrane;0.00276118312729231!GO:0003729;mRNA binding;0.00280492662590663!GO:0000775;chromosome, pericentric region;0.0029038458768567!GO:0051252;regulation of RNA metabolic process;0.00299850851669911!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00315766117428796!GO:0006695;cholesterol biosynthetic process;0.00322564791709939!GO:0015631;tubulin binding;0.00322564791709939!GO:0046467;membrane lipid biosynthetic process;0.00322924679992115!GO:0000776;kinetochore;0.00337307889318652!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00344079124901739!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00344079124901739!GO:0003690;double-stranded DNA binding;0.00345566717091389!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00347654722859358!GO:0045047;protein targeting to ER;0.00347654722859358!GO:0030132;clathrin coat of coated pit;0.00348511205404366!GO:0008094;DNA-dependent ATPase activity;0.00348511205404366!GO:0030127;COPII vesicle coat;0.00356781232113722!GO:0012507;ER to Golgi transport vesicle membrane;0.00356781232113722!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00359293176038409!GO:0012506;vesicle membrane;0.00362724445140734!GO:0046489;phosphoinositide biosynthetic process;0.00365083229276054!GO:0030880;RNA polymerase complex;0.00390210085486078!GO:0006892;post-Golgi vesicle-mediated transport;0.00391229047947217!GO:0030660;Golgi-associated vesicle membrane;0.0039167880543024!GO:0008139;nuclear localization sequence binding;0.00406330925068321!GO:0000059;protein import into nucleus, docking;0.00422142918641167!GO:0005657;replication fork;0.00427149751248546!GO:0005684;U2-dependent spliceosome;0.004338250669782!GO:0030521;androgen receptor signaling pathway;0.004338250669782!GO:0008610;lipid biosynthetic process;0.00436753360694131!GO:0005096;GTPase activator activity;0.0045467803967122!GO:0008312;7S RNA binding;0.00512161385195802!GO:0017166;vinculin binding;0.0051898829149022!GO:0043284;biopolymer biosynthetic process;0.00553606136722083!GO:0045045;secretory pathway;0.00554479040288203!GO:0006818;hydrogen transport;0.00583714994798894!GO:0006302;double-strand break repair;0.00592663607156564!GO:0015992;proton transport;0.00593359425704396!GO:0000786;nucleosome;0.00612335916663605!GO:0008180;signalosome;0.0061659799281461!GO:0006979;response to oxidative stress;0.0061903398439625!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00619343447890523!GO:0015399;primary active transmembrane transporter activity;0.00619343447890523!GO:0048487;beta-tubulin binding;0.00632485410245194!GO:0019222;regulation of metabolic process;0.00638773830806709!GO:0006509;membrane protein ectodomain proteolysis;0.00642660542510962!GO:0033619;membrane protein proteolysis;0.00642660542510962!GO:0030118;clathrin coat;0.00686133474591856!GO:0022406;membrane docking;0.00691642343523256!GO:0048278;vesicle docking;0.00691642343523256!GO:0006650;glycerophospholipid metabolic process;0.00719091595496128!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0073071563390255!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0073071563390255!GO:0050681;androgen receptor binding;0.00760706244685793!GO:0051087;chaperone binding;0.00761932148282013!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00788510800231316!GO:0000428;DNA-directed RNA polymerase complex;0.00788510800231316!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00793262675157148!GO:0044452;nucleolar part;0.0080055307332403!GO:0005637;nuclear inner membrane;0.00806675662910108!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00808397718869095!GO:0003711;transcription elongation regulator activity;0.0081426303824032!GO:0031543;peptidyl-proline dioxygenase activity;0.00819702136720173!GO:0007242;intracellular signaling cascade;0.00820290002537381!GO:0003678;DNA helicase activity;0.00888955984793226!GO:0016272;prefoldin complex;0.00890371676868814!GO:0051052;regulation of DNA metabolic process;0.00891344008783055!GO:0005862;muscle thin filament tropomyosin;0.00910920699533626!GO:0006417;regulation of translation;0.00917667623553646!GO:0005869;dynactin complex;0.0093494814095616!GO:0031418;L-ascorbic acid binding;0.00947179039288615!GO:0005874;microtubule;0.00952812765307499!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00957065755051045!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0100080795280206!GO:0000082;G1/S transition of mitotic cell cycle;0.0101415096223672!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0101415096223672!GO:0031902;late endosome membrane;0.010282084503746!GO:0007006;mitochondrial membrane organization and biogenesis;0.010282084503746!GO:0007052;mitotic spindle organization and biogenesis;0.0106717398904844!GO:0007093;mitotic cell cycle checkpoint;0.0106717398904844!GO:0006904;vesicle docking during exocytosis;0.01070713978138!GO:0000339;RNA cap binding;0.0108854169757437!GO:0051128;regulation of cellular component organization and biogenesis;0.0110105400786206!GO:0046483;heterocycle metabolic process;0.0115102121776562!GO:0016251;general RNA polymerase II transcription factor activity;0.0115134233778995!GO:0003684;damaged DNA binding;0.011634489723654!GO:0030125;clathrin vesicle coat;0.0116441511646736!GO:0030665;clathrin coated vesicle membrane;0.0116441511646736!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0119261188187248!GO:0032984;macromolecular complex disassembly;0.012414730134109!GO:0006402;mRNA catabolic process;0.0125845071938613!GO:0004674;protein serine/threonine kinase activity;0.012634809006248!GO:0003746;translation elongation factor activity;0.0128108035539537!GO:0006740;NADPH regeneration;0.0128115710455682!GO:0006098;pentose-phosphate shunt;0.0128115710455682!GO:0031625;ubiquitin protein ligase binding;0.0128134678625297!GO:0030384;phosphoinositide metabolic process;0.0132094823789965!GO:0008283;cell proliferation;0.0132094823789965!GO:0048144;fibroblast proliferation;0.0133856289860465!GO:0048145;regulation of fibroblast proliferation;0.0133856289860465!GO:0006595;polyamine metabolic process;0.013499296212617!GO:0019798;procollagen-proline dioxygenase activity;0.0136370413426149!GO:0005832;chaperonin-containing T-complex;0.0137251312741235!GO:0006984;ER-nuclear signaling pathway;0.0146066329344826!GO:0007088;regulation of mitosis;0.0146387509438881!GO:0045941;positive regulation of transcription;0.014740098780614!GO:0045893;positive regulation of transcription, DNA-dependent;0.0151584461743784!GO:0007034;vacuolar transport;0.0152804591214915!GO:0030041;actin filament polymerization;0.0157023556398956!GO:0031529;ruffle organization and biogenesis;0.0158855796862835!GO:0051101;regulation of DNA binding;0.0161008475821622!GO:0008033;tRNA processing;0.0161272648083642!GO:0051540;metal cluster binding;0.0161272648083642!GO:0051536;iron-sulfur cluster binding;0.0161272648083642!GO:0048146;positive regulation of fibroblast proliferation;0.016324018597885!GO:0030032;lamellipodium biogenesis;0.0169609139506397!GO:0046519;sphingoid metabolic process;0.0171563080822923!GO:0007030;Golgi organization and biogenesis;0.0174448347382465!GO:0043022;ribosome binding;0.0176204189851019!GO:0003682;chromatin binding;0.0177310986304508!GO:0045892;negative regulation of transcription, DNA-dependent;0.0183158678529017!GO:0022890;inorganic cation transmembrane transporter activity;0.0183486616599848!GO:0007265;Ras protein signal transduction;0.0187237413573777!GO:0006352;transcription initiation;0.0188343777569215!GO:0043065;positive regulation of apoptosis;0.018863495982467!GO:0031124;mRNA 3'-end processing;0.0188795135139513!GO:0043488;regulation of mRNA stability;0.0196948780316718!GO:0043487;regulation of RNA stability;0.0196948780316718!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.019857648608408!GO:0015002;heme-copper terminal oxidase activity;0.019857648608408!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.019857648608408!GO:0004129;cytochrome-c oxidase activity;0.019857648608408!GO:0050790;regulation of catalytic activity;0.01994043794661!GO:0043241;protein complex disassembly;0.0199739938063065!GO:0006354;RNA elongation;0.0200330882350466!GO:0030518;steroid hormone receptor signaling pathway;0.0200330882350466!GO:0003779;actin binding;0.0201009905580012!GO:0016408;C-acyltransferase activity;0.0207317250555928!GO:0043068;positive regulation of programmed cell death;0.0210350851938979!GO:0004177;aminopeptidase activity;0.0216810023399093!GO:0040008;regulation of growth;0.021768206441007!GO:0009889;regulation of biosynthetic process;0.0219532617746013!GO:0030833;regulation of actin filament polymerization;0.0220126270644763!GO:0005938;cell cortex;0.0221071443548673!GO:0006672;ceramide metabolic process;0.0221237571051661!GO:0051287;NAD binding;0.0223179237432805!GO:0006007;glucose catabolic process;0.0228714712472282!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0228750733720445!GO:0030433;ER-associated protein catabolic process;0.0229757399817549!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0229757399817549!GO:0031326;regulation of cellular biosynthetic process;0.0230906895404448!GO:0006497;protein amino acid lipidation;0.0233467633807742!GO:0032940;secretion by cell;0.0236152663229346!GO:0006790;sulfur metabolic process;0.024094688593782!GO:0030119;AP-type membrane coat adaptor complex;0.0241334079369781!GO:0043492;ATPase activity, coupled to movement of substances;0.0250380480383573!GO:0008022;protein C-terminus binding;0.0251354092270141!GO:0000096;sulfur amino acid metabolic process;0.0255359316302073!GO:0006401;RNA catabolic process;0.0257032855348442!GO:0016584;nucleosome positioning;0.0261257981613765!GO:0005581;collagen;0.0262020207223156!GO:0003756;protein disulfide isomerase activity;0.0262164112141787!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0262164112141787!GO:0005774;vacuolar membrane;0.0263072138618766!GO:0033673;negative regulation of kinase activity;0.02663734227859!GO:0006469;negative regulation of protein kinase activity;0.02663734227859!GO:0043624;cellular protein complex disassembly;0.0270323338729175!GO:0008234;cysteine-type peptidase activity;0.027169222061322!GO:0045792;negative regulation of cell size;0.0276557518998055!GO:0031371;ubiquitin conjugating enzyme complex;0.0278356420054835!GO:0006310;DNA recombination;0.0281192178503947!GO:0006611;protein export from nucleus;0.0283208311481231!GO:0000209;protein polyubiquitination;0.0284652123370493!GO:0050811;GABA receptor binding;0.0292131164798838!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0296943289242627!GO:0042168;heme metabolic process;0.0296943289242627!GO:0051272;positive regulation of cell motility;0.0302612476225468!GO:0040017;positive regulation of locomotion;0.0302612476225468!GO:0006778;porphyrin metabolic process;0.0303746681373126!GO:0033013;tetrapyrrole metabolic process;0.0303746681373126!GO:0007021;tubulin folding;0.030481747227634!GO:0007040;lysosome organization and biogenesis;0.0305601363689287!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0307710083532976!GO:0030308;negative regulation of cell growth;0.0312062791770936!GO:0005801;cis-Golgi network;0.0320684111768175!GO:0000910;cytokinesis;0.0321660804481814!GO:0007033;vacuole organization and biogenesis;0.0321703838813563!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0321703838813563!GO:0031301;integral to organelle membrane;0.0323394680580184!GO:0008154;actin polymerization and/or depolymerization;0.0327775906141657!GO:0004287;prolyl oligopeptidase activity;0.032964524157877!GO:0000049;tRNA binding;0.0341139453165719!GO:0005100;Rho GTPase activator activity;0.0341430079365216!GO:0051348;negative regulation of transferase activity;0.0342108378693605!GO:0006739;NADP metabolic process;0.0343919410671114!GO:0022411;cellular component disassembly;0.0349912695649729!GO:0006378;mRNA polyadenylation;0.0350970954289049!GO:0006897;endocytosis;0.0350970954289049!GO:0010324;membrane invagination;0.0350970954289049!GO:0030031;cell projection biogenesis;0.0354942410944235!GO:0051270;regulation of cell motility;0.0359758293073008!GO:0006289;nucleotide-excision repair;0.0370226110760865!GO:0004003;ATP-dependent DNA helicase activity;0.0372571455771571!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0374256716662906!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0374256716662906!GO:0008538;proteasome activator activity;0.0377051913095395!GO:0006376;mRNA splice site selection;0.0378675649929696!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0378675649929696!GO:0006607;NLS-bearing substrate import into nucleus;0.0382882299966792!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0382882299966792!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0384586923211993!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0386413349286393!GO:0032508;DNA duplex unwinding;0.0386413349286393!GO:0032392;DNA geometric change;0.0386413349286393!GO:0008637;apoptotic mitochondrial changes;0.0387410182708!GO:0030503;regulation of cell redox homeostasis;0.0390015417762301!GO:0030131;clathrin adaptor complex;0.0390497153984877!GO:0006275;regulation of DNA replication;0.0393873077753254!GO:0022415;viral reproductive process;0.0393873077753254!GO:0005092;GDP-dissociation inhibitor activity;0.0395389434662653!GO:0001952;regulation of cell-matrix adhesion;0.0398338490713159!GO:0006144;purine base metabolic process;0.0415814998490834!GO:0009225;nucleotide-sugar metabolic process;0.0422858938926422!GO:0009112;nucleobase metabolic process;0.0426977311743254!GO:0030911;TPR domain binding;0.0427710777597242!GO:0000792;heterochromatin;0.0429672592346704!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0431733478879127!GO:0005784;translocon complex;0.0432080990465373!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0432577286368514!GO:0004722;protein serine/threonine phosphatase activity;0.0433822893915688!GO:0030508;thiol-disulfide exchange intermediate activity;0.043559381698205!GO:0035035;histone acetyltransferase binding;0.0437137442686508!GO:0051539;4 iron, 4 sulfur cluster binding;0.0442183963994384!GO:0043433;negative regulation of transcription factor activity;0.0454128180224425!GO:0046426;negative regulation of JAK-STAT cascade;0.0460840677006928!GO:0000118;histone deacetylase complex;0.0465315904459684!GO:0006506;GPI anchor biosynthetic process;0.0486026857859027!GO:0006643;membrane lipid metabolic process;0.0486193114320504!GO:0005099;Ras GTPase activator activity;0.0486574329101513!GO:0043281;regulation of caspase activity;0.0491442382872859!GO:0009966;regulation of signal transduction;0.0491876505955362
|sample_id=11756
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=ovary
|top_motifs=HSF1,2:1.97401061992;NKX3-1:1.64501219368;FOX{I1,J2}:1.49552654633;POU3F1..4:1.36598740002;GZF1:1.29804302461;NFIX:1.26025825509;ALX4:1.25135308953;NFATC1..3:1.24572969592;CDC5L:1.2122353532;TAL1_TCF{3,4,12}:1.17851459776;ALX1:1.17439957042;HOX{A5,B5}:1.12638134737;NKX2-2,8:1.12585009999;AIRE:1.10709984789;EN1,2:1.00663524724;TEF:0.997944839721;ZNF384:0.99783547573;EVI1:0.985551026953;NKX2-1,4:0.905803948049;SRF:0.902704997705;CRX:0.894350575883;ZNF238:0.866010674989;TEAD1:0.863628378084;PAX1,9:0.855016806887;HMGA1,2:0.824156040921;PAX8:0.805827023821;UFEwm:0.794990515226;HBP1_HMGB_SSRP1_UBTF:0.786158410949;HIF1A:0.755961382021;MYBL2:0.753866695287;TLX1..3_NFIC{dimer}:0.733932784721;NFE2L2:0.702913003078;IKZF1:0.690372735129;HOX{A4,D4}:0.67358023666;PPARG:0.656953415923;ZIC1..3:0.620531351013;PRDM1:0.617551988997;XBP1:0.593358344944;NFE2L1:0.577637568891;MZF1:0.5732307246;ZBTB6:0.572228254321;NR3C1:0.555875642749;FOS_FOS{B,L1}_JUN{B,D}:0.534539768722;XCPE1{core}:0.513888443765;BACH2:0.501896425523;RXRA_VDR{dimer}:0.495606882455;GATA4:0.475900615802;TFCP2:0.464590857496;GTF2I:0.445182485816;ATF6:0.444191796986;KLF4:0.443849618399;TBP:0.428658122695;SOX17:0.403914330984;TP53:0.383767937836;ONECUT1,2:0.383650643305;TLX2:0.36211140897;ZBTB16:0.357872373889;TBX4,5:0.332721063169;TFDP1:0.332417248605;GTF2A1,2:0.330670055498;GLI1..3:0.298853809658;PAX6:0.294401075312;HLF:0.292271927913;MAFB:0.291961622007;GFI1B:0.291071408783;FOXM1:0.2873857026;NKX3-2:0.286170884623;AR:0.279515902488;HES1:0.277188446309;PAX2:0.275202159934;RXR{A,B,G}:0.265110213521;NFE2:0.263006297621;EBF1:0.242318010331;JUN:0.228936389361;SMAD1..7,9:0.226882081678;SPZ1:0.226389856653;ELK1,4_GABP{A,B1}:0.220962510542;NFIL3:0.219419124971;GCM1,2:0.218430391007;HMX1:0.208739854373;NANOG{mouse}:0.207317768156;MAZ:0.200054548712;POU1F1:0.197851236375;FOSL2:0.18896128003;LEF1_TCF7_TCF7L1,2:0.185123984523;bHLH_family:0.176559658138;AHR_ARNT_ARNT2:0.168801806034;PAX4:0.154026944371;NRF1:0.148100152077;RUNX1..3:0.145788306063;FOXL1:0.145049582842;MTE{core}:0.142890303799;POU5F1:0.14157628552;CDX1,2,4:0.129538585271;NHLH1,2:0.11916993419;PAX3,7:0.0968824492672;ESR1:0.0788058933685;SOX2:0.0747274733453;ARID5B:0.0571630683636;E2F1..5:0.0535964752845;TFAP2B:0.0508587851182;NKX6-1,2:0.0491751821284;ZFP161:0.0420289251354;HNF1A:0.0295109819556;PATZ1:0.0278336867183;RFX1:0.0264870927496;ZNF143:0.0140621459329;ADNP_IRX_SIX_ZHX:0.00531894557514;EP300:0.00472683994437;DBP:-0.000419827753675;ZNF148:-0.000897257209398;NFKB1_REL_RELA:-0.00516233178867;ELF1,2,4:-0.0259921262862;LHX3,4:-0.0269395983438;ATF2:-0.0465913674639;SOX5:-0.0597748522793;IRF1,2:-0.0774053406621;FOXD3:-0.104231897281;POU2F1..3:-0.105956638694;MED-1{core}:-0.112277038628;ETS1,2:-0.121067581714;CEBPA,B_DDIT3:-0.122578158938;MYFfamily:-0.133498567966;STAT5{A,B}:-0.135977423788;MYB:-0.145439465924;STAT1,3:-0.154614104971;EGR1..3:-0.157583570511;POU6F1:-0.161843965349;SP1:-0.164581680324;TFAP2{A,C}:-0.170390273062;GFI1:-0.172601156304;DMAP1_NCOR{1,2}_SMARC:-0.173343614781;HIC1:-0.176565094504;PAX5:-0.178750357297;OCT4_SOX2{dimer}:-0.19157061014;TFAP4:-0.193459546536;RREB1:-0.195262092879;REST:-0.21770027331;PRRX1,2:-0.221211245474;IRF7:-0.234325952179;SREBF1,2:-0.235309695551;SOX{8,9,10}:-0.260373192318;MEF2{A,B,C,D}:-0.260758991897;NR1H4:-0.279285197618;STAT2,4,6:-0.28487734016;PBX1:-0.291792100559;HNF4A_NR2F1,2:-0.294124709898;NR6A1:-0.294993440331;ESRRA:-0.298567694378;CREB1:-0.30090343513;SPI1:-0.302975845839;FOX{D1,D2}:-0.308162229194;YY1:-0.317228913282;ATF5_CREB3:-0.325449269495;GATA6:-0.368580555588;MTF1:-0.368828108572;HOXA9_MEIS1:-0.385248807059;NFY{A,B,C}:-0.395374690407;LMO2:-0.409746420957;TGIF1:-0.415604285314;BPTF:-0.41583169768;SPIB:-0.422430553068;FOXN1:-0.423087002777;FOXA2:-0.431450019175;FOXQ1:-0.455839337997;ZNF423:-0.471024888599;RBPJ:-0.477208960958;FOXO1,3,4:-0.525166637591;TOPORS:-0.526018963065;FOXP3:-0.55809146089;SNAI1..3:-0.566266596413;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.573031123502;HAND1,2:-0.633124150103;FOXP1:-0.64846213998;IKZF2:-0.66551584301;NR5A1,2:-0.678707523208;MYOD1:-0.682522678823;RFX2..5_RFXANK_RFXAP:-0.703197136213;CUX2:-0.706491245116;ZEB1:-0.762060346265;NKX2-3_NKX2-5:-0.797512767679;RORA:-0.802806525718;ATF4:-0.871314091313;NANOG:-0.871674788464;VSX1,2:-0.890650999034;BREu{core}:-0.89068243198;HOX{A6,A7,B6,B7}:-0.927612063317;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.96446174203;PITX1..3:-0.99122643836;T:-1.08626912861;FOX{F1,F2,J1}:-1.10223033397;PDX1:-1.10436892074
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11756-123H1;search_select_hide=table117:FF:11756-123H1
}}
}}

Latest revision as of 18:18, 4 June 2020

Name:mesenchymal precursor cell - ovarian cancer left ovary, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12372
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueovary
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005641
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12372 CAGE DRX008555 DRR009427
Accession ID Hg19

Library idBAMCTSS
CNhs12372 DRZ000852 DRZ002237
Accession ID Hg38

Library idBAMCTSS
CNhs12372 DRZ012202 DRZ013587
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0379
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.143
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.17
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0652
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0207
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.273
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.109
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0588
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0509
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.12
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0642
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00147
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.0642
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0534
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0554
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.17
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0642
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.12
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.291
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.349
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.75
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.36
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.411
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12372

Jaspar motifP-value
MA0002.20.518
MA0003.10.649
MA0004.10.0782
MA0006.10.47
MA0007.10.852
MA0009.10.206
MA0014.10.851
MA0017.10.197
MA0018.23.59752e-5
MA0019.10.327
MA0024.10.0459
MA0025.10.103
MA0027.10.923
MA0028.10.912
MA0029.10.32
MA0030.10.134
MA0031.10.198
MA0035.20.0714
MA0038.10.172
MA0039.20.0102
MA0040.10.658
MA0041.10.502
MA0042.10.837
MA0043.18.0101e-4
MA0046.10.0605
MA0047.20.565
MA0048.10.15
MA0050.10.0665
MA0051.10.501
MA0052.10.152
MA0055.10.401
MA0057.10.698
MA0058.10.0305
MA0059.10.579
MA0060.19.5868e-5
MA0061.10.431
MA0062.20.0208
MA0065.20.00242
MA0066.10.655
MA0067.10.0219
MA0068.10.276
MA0069.10.714
MA0070.10.994
MA0071.10.228
MA0072.10.361
MA0073.10.833
MA0074.10.355
MA0076.10.706
MA0077.10.945
MA0078.10.619
MA0079.20.153
MA0080.27.14071e-5
MA0081.10.0983
MA0083.15.77886e-4
MA0084.10.0871
MA0087.10.552
MA0088.10.732
MA0090.14.63187e-4
MA0091.10.786
MA0092.10.941
MA0093.10.232
MA0099.25.73956e-15
MA0100.10.643
MA0101.10.0818
MA0102.20.835
MA0103.11.80697e-4
MA0104.20.00647
MA0105.10.0914
MA0106.10.0749
MA0107.10.0586
MA0108.20.0089
MA0111.10.119
MA0112.20.973
MA0113.10.966
MA0114.10.0324
MA0115.10.19
MA0116.10.239
MA0117.10.84
MA0119.10.447
MA0122.10.717
MA0124.10.309
MA0125.10.384
MA0131.10.669
MA0135.10.129
MA0136.17.55281e-4
MA0137.20.91
MA0138.20.0721
MA0139.10.875
MA0140.10.335
MA0141.10.0675
MA0142.10.433
MA0143.10.618
MA0144.10.744
MA0145.10.813
MA0146.10.116
MA0147.10.0517
MA0148.10.806
MA0149.10.723
MA0150.10.0394
MA0152.10.00555
MA0153.10.277
MA0154.10.766
MA0155.10.659
MA0156.10.36
MA0157.10.337
MA0159.10.135
MA0160.10.0225
MA0162.10.0702
MA0163.10.701
MA0164.10.908
MA0258.10.118
MA0259.10.398



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12372

Novel motifP-value
10.673
100.496
1000.317
1010.923
1020.193
1030.709
1040.992
1050.303
1060.884
1070.499
1080.734
1090.455
110.729
1100.184
1110.107
1120.914
1130.0087
1140.646
1150.448
1160.562
1170.842
1180.579
1190.666
120.336
1200.145
1210.772
1220.24
1231.95607e-4
1240.187
1250.973
1260.515
1270.574
1280.851
1290.862
130.439
1300.616
1310.0111
1320.803
1330.659
1340.471
1350.487
1360.969
1370.958
1380.618
1390.667
140.0895
1400.98
1410.595
1420.428
1430.123
1440.922
1450.679
1460.555
1470.0294
1480.658
1490.594
150.816
1500.141
1510.402
1520.32
1530.978
1540.633
1552.0594e-4
1560.468
1570.249
1580.00923
1590.122
160.0962
1600.904
1610.213
1620.783
1630.111
1640.45
1650.936
1660.187
1670.313
1680.985
1690.867
170.867
180.114
190.626
20.484
200.55
210.656
220.875
230.0813
240.225
250.126
260.925
270.951
280.521
290.622
30.923
300.518
310.585
320.00176
330.795
340.699
350.932
360.0404
370.318
380.434
390.127
40.196
400.0635
410.945
420.814
430.586
440.868
450.808
460.952
470.243
480.799
490.0149
50.963
500.674
510.772
520.789
530.0251
540.879
550.283
560.533
570.686
580.123
590.649
60.499
600.544
610.425
620.428
630.916
640.517
650.739
660.662
670.559
680.683
690.133
70.137
700.254
710.374
720.638
730.16
740.569
750.709
760.933
770.323
780.0832
790.04
80.812
800.921
810.778
820.344
830.758
840.583
850.762
860.873
870.354
880.945
890.341
90.494
900.409
910.964
920.928
930.878
940.89
950.534
960.956
970.264
980.00911
990.0292



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12372


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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