FFCP PHASE1:Mm9::chr1:42752559..42752566,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:42752559..42752566,+ | |id=chr1:42752559..42752566,+ | ||
|ontology_enrichment_celltype=CL:0000221!9.27e-20!44;CL:0000133!9.27e-20!44;CL:0002319!4.52e-19!43;CL:0000117!3.72e-17!23;CL:0000337!3.72e-17!23;CL:0000540!6.04e-17!33;CL:0000047!6.04e-17!33;CL:0000031!6.04e-17!33;CL:0000404!6.04e-17!33;CL:0000055!8.60e-17!50;CL:0000393!4.37e-15!39;CL:0000211!4.37e-15!39;CL:0002321!1.65e-08!70;CL:0000220!1.65e-08!70 | |ontology_enrichment_celltype=CL:0000221!9.27e-20!44;CL:0000133!9.27e-20!44;CL:0002319!4.52e-19!43;CL:0000117!3.72e-17!23;CL:0000337!3.72e-17!23;CL:0000540!6.04e-17!33;CL:0000047!6.04e-17!33;CL:0000031!6.04e-17!33;CL:0000404!6.04e-17!33;CL:0000055!8.60e-17!50;CL:0000393!4.37e-15!39;CL:0000211!4.37e-15!39;CL:0002321!1.65e-08!70;CL:0000220!1.65e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.42e-27,44;CL:0000133,4.42e-27,44;CL:0002319,8.78e-26,43;CL:0000117,2.17e-24,23;CL:0000337,2.17e-24,23;CL:0000540,2.29e-19,33;CL:0000047,2.29e-19,33;CL:0000031,2.29e-19,33;CL:0000404,2.29e-19,33;CL:0000393,1.68e-15,39;CL:0000211,1.68e-15,39;CL:0002321,3.82e-14,70;CL:0002609,3.66e-12,6;CL:0002453,3.07e-09,8;CL:0000333,3.53e-07,10;CL:0000095,3.53e-07,10;CL:0000243,3.53e-07,10;CL:0000123,3.53e-07,10;CL:0000125,3.53e-07,10;CL:0000030,3.53e-07,10;CL:0000339,3.53e-07,10;CL:0000128,4.72e-07,6;CL:0000126,4.72e-07,6;CL:0000127,4.72e-07,6;CL:0000120,9.74e-07,3;CL:0002608,9.74e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.92e-33!73;UBERON:0005743!6.92e-33!73;UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0002020!7.79e-26!34;UBERON:0001049!5.13e-24!52;UBERON:0005068!5.13e-24!52;UBERON:0006241!5.13e-24!52;UBERON:0007135!5.13e-24!52;UBERON:0002791!6.41e-23!29;UBERON:0003528!6.41e-23!29;UBERON:0001893!6.41e-23!29;UBERON:0000955!1.07e-22!50;UBERON:0006238!1.07e-22!50;UBERON:0002616!2.16e-22!49;UBERON:0004121!3.75e-22!102;UBERON:0000924!3.75e-22!102;UBERON:0006601!3.75e-22!102;UBERON:0000033!3.09e-20!63;UBERON:0002346!5.46e-20!71;UBERON:0003075!5.46e-20!71;UBERON:0007284!5.46e-20!71;UBERON:0003080!1.24e-18!40;UBERON:0002780!6.51e-18!39;UBERON:0001890!6.51e-18!39;UBERON:0006240!6.51e-18!39;UBERON:0000956!1.20e-17!21;UBERON:0001869!1.20e-17!21;UBERON:0000203!1.20e-17!21;UBERON:0003056!5.52e-16!49;UBERON:0002619!3.75e-14!17;UBERON:0007811!1.23e-11!86;UBERON:0000489!1.13e-09!21;UBERON:0000153!1.22e-09!94;UBERON:0002021!1.67e-08!10;UBERON:0000411!1.67e-08!10;UBERON:0001950!1.67e-08!10;UBERON:0001954!4.22e-07!7;UBERON:0003022!4.22e-07!7;UBERON:0002421!4.22e-07!7;UBERON:0000349!4.22e-07!7;UBERON:0002600!4.22e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!6.92e-33!73;UBERON:0005743!6.92e-33!73;UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0002020!7.79e-26!34;UBERON:0001049!5.13e-24!52;UBERON:0005068!5.13e-24!52;UBERON:0006241!5.13e-24!52;UBERON:0007135!5.13e-24!52;UBERON:0002791!6.41e-23!29;UBERON:0003528!6.41e-23!29;UBERON:0001893!6.41e-23!29;UBERON:0000955!1.07e-22!50;UBERON:0006238!1.07e-22!50;UBERON:0002616!2.16e-22!49;UBERON:0004121!3.75e-22!102;UBERON:0000924!3.75e-22!102;UBERON:0006601!3.75e-22!102;UBERON:0000033!3.09e-20!63;UBERON:0002346!5.46e-20!71;UBERON:0003075!5.46e-20!71;UBERON:0007284!5.46e-20!71;UBERON:0003080!1.24e-18!40;UBERON:0002780!6.51e-18!39;UBERON:0001890!6.51e-18!39;UBERON:0006240!6.51e-18!39;UBERON:0000956!1.20e-17!21;UBERON:0001869!1.20e-17!21;UBERON:0000203!1.20e-17!21;UBERON:0003056!5.52e-16!49;UBERON:0002619!3.75e-14!17;UBERON:0007811!1.23e-11!86;UBERON:0000489!1.13e-09!21;UBERON:0000153!1.22e-09!94;UBERON:0002021!1.67e-08!10;UBERON:0000411!1.67e-08!10;UBERON:0001950!1.67e-08!10;UBERON:0001954!4.22e-07!7;UBERON:0003022!4.22e-07!7;UBERON:0002421!4.22e-07!7;UBERON:0000349!4.22e-07!7;UBERON:0002600!4.22e-07!7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.39e-42,34;UBERON:0003528,4.62e-41,29;UBERON:0002791,4.62e-41,29;UBERON:0001893,4.62e-41,29;UBERON:0001017,6.80e-41,73;UBERON:0001016,1.63e-39,75;UBERON:0000073,1.59e-35,54;UBERON:0000956,2.26e-35,21;UBERON:0001869,2.26e-35,21;UBERON:0000203,2.26e-35,21;UBERON:0001049,9.47e-33,52;UBERON:0005068,9.47e-33,52;UBERON:0006241,9.47e-33,52;UBERON:0007135,9.47e-33,52;UBERON:0003080,1.56e-32,40;UBERON:0002616,1.72e-31,46;UBERON:0002780,4.57e-31,39;UBERON:0001890,4.57e-31,39;UBERON:0006240,4.57e-31,39;UBERON:0000955,1.22e-30,47;UBERON:0006238,1.22e-30,47;UBERON:0004121,1.53e-30,95;UBERON:0000924,1.53e-30,95;UBERON:0006601,1.53e-30,95;UBERON:0002619,5.35e-28,17;UBERON:0002346,1.25e-26,64;UBERON:0003075,1.25e-26,64;UBERON:0007284,1.25e-26,64;UBERON:0010371,1.41e-25,73;UBERON:0003056,4.57e-25,49;UBERON:0010314,2.60e-18,92;UBERON:0002021,4.01e-16,10;UBERON:0000411,4.01e-16,10;UBERON:0001950,4.01e-16,10;UBERON:0001954,3.44e-13,7;UBERON:0003022,3.44e-13,7;UBERON:0002421,3.44e-13,7;UBERON:0000349,3.44e-13,7;UBERON:0002600,3.44e-13,7;UBERON:0004111,2.09e-11,122;UBERON:0000025,4.18e-10,114;UBERON:0011216,2.45e-09,194;UBERON:0002420,2.05e-07,8;UBERON:0007245,2.05e-07,8;UBERON:0010009,2.05e-07,8;UBERON:0010011,2.05e-07,8;UBERON:0000454,2.05e-07,8 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,1.96222640742402,3.73466510648602,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,0,0,0.515672092277442,2.22548106945558,3.70293685490423,4.43681982454325,0,0,0,0,0,1.19840044207362,1.15265491596466,3.7328260431052,3.10513658162888,4.83747411108179,1.42825492201902,1.32521124570968,4.28717797252339,4.88811902193005,1.83843757322004,2.20231761998777,0.766124028511126,1.38245879930619,1.71452174049252,2.01272815925301,2.6045668527838,0.558365998002762,1.12552522006336,1.68078072554491,0.883885756421003,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.9472783122627,0.915001205637253,3.76963056338593,2.43354048269187,3.06858548796397,2.28566849015516,0.811206315338788,0.407357455401265,0.497627882440372,0.505445516867349,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,2.77842453424068,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.610953983535943,0.969762435838129,0.98190147846446,1.13825766823663,2.50937251565324,2.04098346193787,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0,0,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0.503653849092235,0.19318959403219,0,0,0,1.00314420807073,2.25900737046827,2.30162618253588,1.71868654031819,1.54667864109319,2.74033007908257,2.2661816921691,1.35004500046361,3.15224842256954,1.81256963593682,1.55328093525546,0.726511433089237,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.962757628775446,0,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,1.96222640742402,3.73466510648602,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,0,0,0.515672092277442,2.22548106945558,3.70293685490423,4.43681982454325,0,0,0,0,0,1.19840044207362,1.15265491596466,3.7328260431052,3.10513658162888,4.83747411108179,1.42825492201902,1.32521124570968,4.28717797252339,4.88811902193005,1.83843757322004,2.20231761998777,0.766124028511126,1.38245879930619,1.71452174049252,2.01272815925301,2.6045668527838,0.558365998002762,1.12552522006336,1.68078072554491,0.883885756421003,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.9472783122627,0.915001205637253,3.76963056338593,2.43354048269187,3.06858548796397,2.28566849015516,0.811206315338788,0.407357455401265,0.497627882440372,0.505445516867349,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,2.77842453424068,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.610953983535943,0.969762435838129,0.98190147846446,1.13825766823663,2.50937251565324,2.04098346193787,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.28932855251423,0,0,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0.221985953374065,0.358855426437903,0.503653849092235,0.19318959403219,0,0,0,1.00314420807073,2.25900737046827,2.30162618253588,1.71868654031819,1.54667864109319,2.74033007908257,2.2661816921691,1.35004500046361,3.15224842256954,1.81256963593682,1.55328093525546,0.726511433089237,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.962757628775446,0,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0,0.347652977834566,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:42752559..42752566,+ | |short_description=p@chr1:42752559..42752566,+ | ||
}} | }} |
Revision as of 03:12, 14 November 2012
Short description: | p3@Pou3f3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pou3f3_5end |
Coexpression cluster: | MCL_coexpression_mm9:670 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.42e-27 | 44 |
neurectodermal cell | 4.42e-27 | 44 |
neural cell | 8.78e-26 | 43 |
CNS neuron (sensu Vertebrata) | 2.17e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-24 | 23 |
neuron | 2.29e-19 | 33 |
neuronal stem cell | 2.29e-19 | 33 |
neuroblast | 2.29e-19 | 33 |
electrically signaling cell | 2.29e-19 | 33 |
electrically responsive cell | 1.68e-15 | 39 |
electrically active cell | 1.68e-15 | 39 |
embryonic cell | 3.82e-14 | 70 |
neuron of cerebral cortex | 3.66e-12 | 6 |
oligodendrocyte precursor cell | 3.07e-09 | 8 |
migratory neural crest cell | 3.53e-07 | 10 |
neuron associated cell | 3.53e-07 | 10 |
glial cell (sensu Vertebrata) | 3.53e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.53e-07 | 10 |
glial cell | 3.53e-07 | 10 |
glioblast | 3.53e-07 | 10 |
glioblast (sensu Vertebrata) | 3.53e-07 | 10 |
oligodendrocyte | 4.72e-07 | 6 |
macroglial cell | 4.72e-07 | 6 |
astrocyte | 4.72e-07 | 6 |
granule cell | 9.74e-07 | 3 |
hippocampal neuron | 9.74e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.