FFCP PHASE1:Mm9::chr4:151490126..151490137,+: Difference between revisions
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|id=chr4:151490126..151490137,+ | |id=chr4:151490126..151490137,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.15e-22!9;CL:0000789!1.15e-22!9;CL:0002420!1.15e-22!9;CL:0002419!1.15e-22!9;CL:0000790!1.15e-22!9;CL:0000624!2.10e-20!8;CL:0000084!3.47e-18!11;CL:0000827!3.47e-18!11;CL:0000838!1.66e-16!12;CL:0000893!1.09e-15!6;CL:0002489!1.09e-15!6;CL:0000898!1.09e-15!6;CL:0000809!1.09e-15!6;CL:0000810!1.09e-15!6;CL:0000895!1.09e-15!6;CL:0000808!1.09e-15!6;CL:0000894!1.09e-15!6;CL:0000806!1.09e-15!6;CL:0000807!1.09e-15!6;CL:0000805!1.09e-15!6;CL:0002425!1.09e-15!6;CL:0002436!1.09e-15!6;CL:0002427!1.09e-15!6;CL:0002428!1.09e-15!6;CL:0002429!1.09e-15!6;CL:0002433!1.09e-15!6;CL:0002431!1.09e-15!6;CL:0002432!1.09e-15!6;CL:0000542!4.38e-15!13;CL:0000051!4.38e-15!13;CL:0000738!4.46e-11!17;CL:0002087!4.46e-11!17;CL:0002031!4.27e-10!25;CL:0000988!2.34e-07!32;CL:0002032!2.34e-07!32;CL:0000037!2.34e-07!32;CL:0000566!2.34e-07!32;CL:0000837!2.34e-07!32 | |ontology_enrichment_celltype=CL:0000791!1.15e-22!9;CL:0000789!1.15e-22!9;CL:0002420!1.15e-22!9;CL:0002419!1.15e-22!9;CL:0000790!1.15e-22!9;CL:0000624!2.10e-20!8;CL:0000084!3.47e-18!11;CL:0000827!3.47e-18!11;CL:0000838!1.66e-16!12;CL:0000893!1.09e-15!6;CL:0002489!1.09e-15!6;CL:0000898!1.09e-15!6;CL:0000809!1.09e-15!6;CL:0000810!1.09e-15!6;CL:0000895!1.09e-15!6;CL:0000808!1.09e-15!6;CL:0000894!1.09e-15!6;CL:0000806!1.09e-15!6;CL:0000807!1.09e-15!6;CL:0000805!1.09e-15!6;CL:0002425!1.09e-15!6;CL:0002436!1.09e-15!6;CL:0002427!1.09e-15!6;CL:0002428!1.09e-15!6;CL:0002429!1.09e-15!6;CL:0002433!1.09e-15!6;CL:0002431!1.09e-15!6;CL:0002432!1.09e-15!6;CL:0000542!4.38e-15!13;CL:0000051!4.38e-15!13;CL:0000738!4.46e-11!17;CL:0002087!4.46e-11!17;CL:0002031!4.27e-10!25;CL:0000988!2.34e-07!32;CL:0002032!2.34e-07!32;CL:0000037!2.34e-07!32;CL:0000566!2.34e-07!32;CL:0000837!2.34e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.31e-86,9;CL:0000789,1.31e-86,9;CL:0002420,1.31e-86,9;CL:0002419,1.31e-86,9;CL:0000790,1.31e-86,9;CL:0000624,2.02e-77,8;CL:0000084,6.78e-71,11;CL:0000827,6.78e-71,11;CL:0000838,5.33e-65,12;CL:0000542,5.21e-60,13;CL:0000051,5.21e-60,13;CL:0000893,2.69e-58,6;CL:0002489,2.69e-58,6;CL:0000898,2.69e-58,6;CL:0000809,2.69e-58,6;CL:0000810,2.69e-58,6;CL:0000895,2.69e-58,6;CL:0000808,2.69e-58,6;CL:0000894,2.69e-58,6;CL:0000806,2.69e-58,6;CL:0000807,2.69e-58,6;CL:0000805,2.69e-58,6;CL:0002425,2.69e-58,6;CL:0002436,2.69e-58,6;CL:0002427,2.69e-58,6;CL:0002428,2.69e-58,6;CL:0002429,2.69e-58,6;CL:0002433,2.69e-58,6;CL:0002431,2.69e-58,6;CL:0002432,2.69e-58,6;CL:0000738,6.54e-46,17;CL:0002087,6.54e-46,17;CL:0002031,3.19e-31,25;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0000625,1.12e-10,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!6.70e-26!24;UBERON:0001557!6.70e-26!24;UBERON:0001042!6.70e-26!24;UBERON:0008814!6.70e-26!24;UBERON:0009145!6.70e-26!24;UBERON:0002370!3.34e-24!23;UBERON:0000974!3.34e-24!23;UBERON:0004807!3.34e-24!23;UBERON:0005058!3.34e-24!23;UBERON:0003351!3.34e-24!23;UBERON:0009113!3.34e-24!23;UBERON:0003295!3.34e-24!23;UBERON:0009722!3.34e-24!23;UBERON:0005562!3.34e-24!23;UBERON:0007690!3.34e-24!23;UBERON:0004177!1.56e-23!29;UBERON:0003408!5.03e-23!24;UBERON:0000072!1.52e-22!27;UBERON:0002193!1.91e-17!48;UBERON:0000065!5.42e-17!41;UBERON:0002390!5.92e-17!45;UBERON:0003061!5.92e-17!45;UBERON:0001004!1.78e-16!42;UBERON:0000063!2.04e-16!35;UBERON:0005057!2.37e-14!51;UBERON:0002405!9.43e-13!70;UBERON:0001041!2.56e-10!92;UBERON:0003929!3.83e-10!55;UBERON:0000077!1.74e-09!97;UBERON:0005911!2.84e-09!69;UBERON:0002368!6.08e-09!60;UBERON:0000949!1.10e-08!72;UBERON:0002530!6.23e-08!65;UBERON:0000490!9.49e-08!66;UBERON:0004921!2.11e-07!126;UBERON:0004185!2.11e-07!126;UBERON:0003081!3.15e-07!88;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!5.47e-07!130;UBERON:0000925!5.47e-07!130;UBERON:0006595!5.47e-07!130 | |ontology_enrichment_uberon=UBERON:0006562!6.70e-26!24;UBERON:0001557!6.70e-26!24;UBERON:0001042!6.70e-26!24;UBERON:0008814!6.70e-26!24;UBERON:0009145!6.70e-26!24;UBERON:0002370!3.34e-24!23;UBERON:0000974!3.34e-24!23;UBERON:0004807!3.34e-24!23;UBERON:0005058!3.34e-24!23;UBERON:0003351!3.34e-24!23;UBERON:0009113!3.34e-24!23;UBERON:0003295!3.34e-24!23;UBERON:0009722!3.34e-24!23;UBERON:0005562!3.34e-24!23;UBERON:0007690!3.34e-24!23;UBERON:0004177!1.56e-23!29;UBERON:0003408!5.03e-23!24;UBERON:0000072!1.52e-22!27;UBERON:0002193!1.91e-17!48;UBERON:0000065!5.42e-17!41;UBERON:0002390!5.92e-17!45;UBERON:0003061!5.92e-17!45;UBERON:0001004!1.78e-16!42;UBERON:0000063!2.04e-16!35;UBERON:0005057!2.37e-14!51;UBERON:0002405!9.43e-13!70;UBERON:0001041!2.56e-10!92;UBERON:0003929!3.83e-10!55;UBERON:0000077!1.74e-09!97;UBERON:0005911!2.84e-09!69;UBERON:0002368!6.08e-09!60;UBERON:0000949!1.10e-08!72;UBERON:0002530!6.23e-08!65;UBERON:0000490!9.49e-08!66;UBERON:0004921!2.11e-07!126;UBERON:0004185!2.11e-07!126;UBERON:0003081!3.15e-07!88;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!5.47e-07!130;UBERON:0000925!5.47e-07!130;UBERON:0006595!5.47e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,2.52e-15,23;UBERON:0000974,2.52e-15,23;UBERON:0004807,2.52e-15,23;UBERON:0005058,2.52e-15,23;UBERON:0003351,2.52e-15,23;UBERON:0009113,2.52e-15,23;UBERON:0003295,2.52e-15,23;UBERON:0009722,2.52e-15,23;UBERON:0005562,2.52e-15,23;UBERON:0007690,2.52e-15,23;UBERON:0006562,1.09e-14,24;UBERON:0003408,1.09e-14,24;UBERON:0001557,1.09e-14,24;UBERON:0001042,1.09e-14,24;UBERON:0008814,1.09e-14,24;UBERON:0009145,1.09e-14,24;UBERON:0000072,4.66e-13,27;UBERON:0004177,3.71e-12,29;UBERON:0005057,3.71e-12,29;UBERON:0000077,4.56e-10,35;UBERON:0007811,8.72e-10,36;UBERON:0000065,1.39e-08,41;UBERON:0001004,2.24e-08,42;UBERON:0000153,3.53e-08,43;UBERON:0002390,8.24e-08,45;UBERON:0003061,8.24e-08,45;UBERON:0002193,2.58e-07,48;UBERON:0002405,2.58e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,9.03863264091034,13.938083493015,21.0658073689794,2.22583358693156,2.95156988282745,4.62241970814255,5.42006494997784,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.683483523191411,0,0,0,0,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.600977247599844,0.886137163047463,0.302899349844443,0.609654453239999,0.302478555410522,0.682205165178267,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,9.03863264091034,13.938083493015,21.0658073689794,2.22583358693156,2.95156988282745,4.62241970814255,5.42006494997784,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.683483523191411,0,0,0,0,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.600977247599844,0.886137163047463,0.302899349844443,0.609654453239999,0.302478555410522,0.682205165178267,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p3@Tnfrsf25 | |short_description=p3@Tnfrsf25 | ||
}} | }} |
Revision as of 08:02, 14 November 2012
Short description: | p3@Tnfrsf25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tnfrsf25_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 83bp_to_ENSMUST00000025706_5end |
EntrezGene: | Tnfrsf25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.46e-17 | 46 |
thymus | 2.52e-15 | 23 |
neck | 2.52e-15 | 23 |
respiratory system epithelium | 2.52e-15 | 23 |
hemolymphoid system gland | 2.52e-15 | 23 |
pharyngeal epithelium | 2.52e-15 | 23 |
thymic region | 2.52e-15 | 23 |
pharyngeal gland | 2.52e-15 | 23 |
entire pharyngeal arch endoderm | 2.52e-15 | 23 |
thymus primordium | 2.52e-15 | 23 |
early pharyngeal endoderm | 2.52e-15 | 23 |
pharynx | 1.09e-14 | 24 |
gland of gut | 1.09e-14 | 24 |
upper respiratory tract | 1.09e-14 | 24 |
chordate pharynx | 1.09e-14 | 24 |
pharyngeal arch system | 1.09e-14 | 24 |
pharyngeal region of foregut | 1.09e-14 | 24 |
segment of respiratory tract | 4.66e-13 | 27 |
hemopoietic organ | 3.71e-12 | 29 |
immune organ | 3.71e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 4.56e-10 | 35 |
craniocervical region | 8.72e-10 | 36 |
respiratory tract | 1.39e-08 | 41 |
respiratory system | 2.24e-08 | 42 |
anterior region of body | 3.53e-08 | 43 |
hematopoietic system | 8.24e-08 | 45 |
blood island | 8.24e-08 | 45 |
hemolymphoid system | 2.58e-07 | 48 |
immune system | 2.58e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.