FFCP PHASE1:Hg19::chr11:61722781..61722805,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12703|TSSclassifier=W|UniProt=|association_with_transcript=77bp_to_uc010rlv.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_4_at_BEST1_5end|id=chr11:61722781..61722805,+|ontology_enrichment_celltype=CL:0000766!2.35e-39!76;CL:0002194!5.33e-35!63;CL:0000576!5.33e-35!63;CL:0000040!5.33e-35!63;CL:0000559!5.33e-35!63;CL:0002009!2.61e-34!65;CL:0000557!2.22e-33!71;CL:0000839!4.62e-33!70;CL:0002057!5.99e-32!42;CL:0000860!2.50e-28!45;CL:0000763!1.56e-21!112;CL:0000049!1.56e-21!112;CL:0000738!2.21e-13!140;CL:0002087!1.08e-11!119;CL:0002031!4.35e-11!124;CL:0000037!1.12e-08!172;CL:0000566!1.12e-08!172;CL:0002032!2.07e-08!165;CL:0000837!2.07e-08!165;CL:0000988!5.55e-08!182;CL:0002393!3.73e-07!9;CL:0002397!3.73e-07!9;CL:0002320!7.85e-07!365|ontology_enrichment_celltype_v019=CL:0000473;7.00e-56;39!CL:0000234;7.00e-56;39!CL:0000860;1.28e-54;33!CL:0002057;1.28e-54;33!CL:0000576;2.09e-43;48!CL:0000766;1.85e-37;69!CL:0000763;1.14e-16;100!CL:0000235;3.07e-13;6!CL:0000738;3.04e-11;136!CL:0000094;1.85e-10;8!CL:0000081;1.69e-09;11!CL:0002087;2.29e-09;104!CL:0000775;2.80e-08;3!CL:0002393;3.57e-08;6!CL:0002397;3.57e-08;6!CL:0002619;4.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-92,72;CL:0002194,5.62e-81,59;CL:0000576,5.62e-81,59;CL:0000040,5.62e-81,59;CL:0000559,5.62e-81,59;CL:0000473,1.17e-80,48;CL:0000234,1.17e-80,48;CL:0000839,1.32e-79,66;CL:0000557,3.40e-78,67;CL:0002009,7.45e-78,61;CL:0000860,1.66e-68,42;CL:0002057,1.66e-68,42;CL:0000763,4.27e-56,108;CL:0000049,4.27e-56,108;CL:0000738,9.21e-43,136;CL:0002031,7.15e-37,120;CL:0002087,4.36e-36,115;CL:0002032,4.66e-32,161;CL:0000837,4.66e-32,161;CL:0000037,2.32e-31,168;CL:0000988,4.60e-30,177;CL:0000134,1.90e-16,354;CL:0002320,9.44e-16,361;CL:0000219,2.59e-13,386;CL:0000235,3.58e-13,6;CL:0000048,1.65e-11,427;CL:0000723,4.40e-11,433;CL:0000034,1.56e-10,441;CL:0000094,1.99e-10,8;CL:0002393,6.47e-10,9;CL:0002397,6.47e-10,9;CL:0000081,2.15e-09,11;CL:0000775,2.81e-08,3;CL:0002619,3.91e-07,3|ontology_enrichment_development_v019=CL:0002057;5.84e-50;42!CL:0000049;4.63e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.45e-34!102;UBERON:0003061!9.45e-34!102;UBERON:0002193!1.47e-30!112;UBERON:0002371!7.42e-29!80;UBERON:0001474!8.45e-25!86;UBERON:0004765!9.17e-21!101;UBERON:0001434!9.17e-21!101;UBERON:0002204!2.89e-18!167;UBERON:0002405!9.09e-18!115;UBERON:0007023!6.33e-15!115;UBERON:0003081!2.93e-13!216;UBERON:0000468!1.24e-08!659;UBERON:0000479!2.80e-08!787;UBERON:0000467!2.21e-07!625;UBERON:0000480!2.88e-07!626;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0002050!3.82e-07!605;UBERON:0005423!3.82e-07!605;UBERON:0000178!6.92e-07!15;UBERON:0000179!6.92e-07!15;UBERON:0000463!6.92e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-14;15!UBERON:0000179;9.09e-14;15!UBERON:0000463;9.09e-14;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.97e-74,98;UBERON:0003061,2.97e-74,98;UBERON:0002193,2.86e-70,108;UBERON:0002371,3.88e-67,76;UBERON:0001474,4.18e-61,82;UBERON:0002405,2.31e-56,93;UBERON:0004765,2.64e-54,90;UBERON:0001434,2.49e-47,100;UBERON:0003081,1.60e-32,203;UBERON:0002204,1.95e-24,167;UBERON:0000926,1.08e-20,315;UBERON:0004120,1.08e-20,315;UBERON:0006603,1.08e-20,315;UBERON:0002384,8.35e-15,371;UBERON:0000178,8.79e-14,15;UBERON:0000179,8.79e-14,15;UBERON:0000463,8.79e-14,15;UBERON:0000923,6.94e-07,560;UBERON:0010316,6.94e-07,560;UBERON:0005291,6.94e-07,560;UBERON:0006598,6.94e-07,560;UBERON:0010317,6.94e-07,560;UBERON:0002532,6.94e-07,560|phase1_expression=1.2717486548939,0.642301571672949,2.11431606143957,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0,2.16742572642506,0,0,0,0,0,0.293600439334847,1.66198622559563,2.20598892217156,2.82114131930607,4.47830948479849,4.53451132426571,2.57575567634187,7.26991193897824,7.935394817465,6.54976965207104,7.20530014407622,6.98985409637104,8.3620720141678,3.74000110018796,3.84241059793651,4.49316236788312,4.48169384957604,4.51839278508678,6.77132432971709,8.84738995850242,5.45812300115692,9.21366286224847,2.75475503133812,4.17207735198922,3.83602275479425,2.63881040149373,3.98927315243264,7.6720455095885,1.7412554317715,0.56738522469114,3.11411124497787,5.52747063564835,5.21482918420201,4.56096573880745,3.02699751316684,5.89244217580104,4.1140110367315,0.845021145247767,2.33864729961548,2.72556239160889,2.3589012540764,4.50530678524519,2.08943262706204,1.42506371870624,0.99458338599545,1.82664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12703 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=77bp_to_uc010rlv.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_BEST1_5end | |||
|id=chr11:61722781..61722805,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.35e-39!76;CL:0002194!5.33e-35!63;CL:0000576!5.33e-35!63;CL:0000040!5.33e-35!63;CL:0000559!5.33e-35!63;CL:0002009!2.61e-34!65;CL:0000557!2.22e-33!71;CL:0000839!4.62e-33!70;CL:0002057!5.99e-32!42;CL:0000860!2.50e-28!45;CL:0000763!1.56e-21!112;CL:0000049!1.56e-21!112;CL:0000738!2.21e-13!140;CL:0002087!1.08e-11!119;CL:0002031!4.35e-11!124;CL:0000037!1.12e-08!172;CL:0000566!1.12e-08!172;CL:0002032!2.07e-08!165;CL:0000837!2.07e-08!165;CL:0000988!5.55e-08!182;CL:0002393!3.73e-07!9;CL:0002397!3.73e-07!9;CL:0002320!7.85e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.00e-56;39!CL:0000234;7.00e-56;39!CL:0000860;1.28e-54;33!CL:0002057;1.28e-54;33!CL:0000576;2.09e-43;48!CL:0000766;1.85e-37;69!CL:0000763;1.14e-16;100!CL:0000235;3.07e-13;6!CL:0000738;3.04e-11;136!CL:0000094;1.85e-10;8!CL:0000081;1.69e-09;11!CL:0002087;2.29e-09;104!CL:0000775;2.80e-08;3!CL:0002393;3.57e-08;6!CL:0002397;3.57e-08;6!CL:0002619;4.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-92,72;CL:0002194,5.62e-81,59;CL:0000576,5.62e-81,59;CL:0000040,5.62e-81,59;CL:0000559,5.62e-81,59;CL:0000473,1.17e-80,48;CL:0000234,1.17e-80,48;CL:0000839,1.32e-79,66;CL:0000557,3.40e-78,67;CL:0002009,7.45e-78,61;CL:0000860,1.66e-68,42;CL:0002057,1.66e-68,42;CL:0000763,4.27e-56,108;CL:0000049,4.27e-56,108;CL:0000738,9.21e-43,136;CL:0002031,7.15e-37,120;CL:0002087,4.36e-36,115;CL:0002032,4.66e-32,161;CL:0000837,4.66e-32,161;CL:0000037,2.32e-31,168;CL:0000988,4.60e-30,177;CL:0000134,1.90e-16,354;CL:0002320,9.44e-16,361;CL:0000219,2.59e-13,386;CL:0000235,3.58e-13,6;CL:0000048,1.65e-11,427;CL:0000723,4.40e-11,433;CL:0000034,1.56e-10,441;CL:0000094,1.99e-10,8;CL:0002393,6.47e-10,9;CL:0002397,6.47e-10,9;CL:0000081,2.15e-09,11;CL:0000775,2.81e-08,3;CL:0002619,3.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.84e-50;42!CL:0000049;4.63e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.45e-34!102;UBERON:0003061!9.45e-34!102;UBERON:0002193!1.47e-30!112;UBERON:0002371!7.42e-29!80;UBERON:0001474!8.45e-25!86;UBERON:0004765!9.17e-21!101;UBERON:0001434!9.17e-21!101;UBERON:0002204!2.89e-18!167;UBERON:0002405!9.09e-18!115;UBERON:0007023!6.33e-15!115;UBERON:0003081!2.93e-13!216;UBERON:0000468!1.24e-08!659;UBERON:0000479!2.80e-08!787;UBERON:0000467!2.21e-07!625;UBERON:0000480!2.88e-07!626;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0002050!3.82e-07!605;UBERON:0005423!3.82e-07!605;UBERON:0000178!6.92e-07!15;UBERON:0000179!6.92e-07!15;UBERON:0000463!6.92e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-14;15!UBERON:0000179;9.09e-14;15!UBERON:0000463;9.09e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.97e-74,98;UBERON:0003061,2.97e-74,98;UBERON:0002193,2.86e-70,108;UBERON:0002371,3.88e-67,76;UBERON:0001474,4.18e-61,82;UBERON:0002405,2.31e-56,93;UBERON:0004765,2.64e-54,90;UBERON:0001434,2.49e-47,100;UBERON:0003081,1.60e-32,203;UBERON:0002204,1.95e-24,167;UBERON:0000926,1.08e-20,315;UBERON:0004120,1.08e-20,315;UBERON:0006603,1.08e-20,315;UBERON:0002384,8.35e-15,371;UBERON:0000178,8.79e-14,15;UBERON:0000179,8.79e-14,15;UBERON:0000463,8.79e-14,15;UBERON:0000923,6.94e-07,560;UBERON:0010316,6.94e-07,560;UBERON:0005291,6.94e-07,560;UBERON:0006598,6.94e-07,560;UBERON:0010317,6.94e-07,560;UBERON:0002532,6.94e-07,560 | |||
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| |||
|short_description=p4@BEST1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p4@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BEST1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 77bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.97e-74 | 98 |
blood island | 2.97e-74 | 98 |
hemolymphoid system | 2.86e-70 | 108 |
bone marrow | 3.88e-67 | 76 |
bone element | 4.18e-61 | 82 |
immune system | 2.31e-56 | 93 |
skeletal element | 2.64e-54 | 90 |
skeletal system | 2.49e-47 | 100 |
lateral plate mesoderm | 1.60e-32 | 203 |
musculoskeletal system | 1.95e-24 | 167 |
mesoderm | 1.08e-20 | 315 |
mesoderm-derived structure | 1.08e-20 | 315 |
presumptive mesoderm | 1.08e-20 | 315 |
connective tissue | 8.35e-15 | 371 |
blood | 8.79e-14 | 15 |
haemolymphatic fluid | 8.79e-14 | 15 |
organism substance | 8.79e-14 | 15 |
germ layer | 6.94e-07 | 560 |
germ layer / neural crest | 6.94e-07 | 560 |
embryonic tissue | 6.94e-07 | 560 |
presumptive structure | 6.94e-07 | 560 |
germ layer / neural crest derived structure | 6.94e-07 | 560 |
epiblast (generic) | 6.94e-07 | 560 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.