FFCP PHASE1:Hg19::chr11:65846791..65846796,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:65846791..65846796,+|id=chr11:65846791..65846796,+|ontology_enrichment_celltype=CL:0000738!1.15e-07!140;CL:0002087!1.66e-07!119;CL:0002031!8.45e-07!124|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.75e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.37e-15!115;UBERON:0001049!4.65e-11!57;UBERON:0005068!4.65e-11!57;UBERON:0006241!4.65e-11!57;UBERON:0007135!4.65e-11!57;UBERON:0002346!1.60e-08!90;UBERON:0000073!1.97e-08!94;UBERON:0001016!1.97e-08!94;UBERON:0002616!3.04e-08!59;UBERON:0002020!5.08e-08!34;UBERON:0003528!5.08e-08!34;UBERON:0001017!5.93e-08!82;UBERON:0000955!6.58e-08!69;UBERON:0006238!6.58e-08!69;UBERON:0001893!1.39e-07!34;UBERON:0003075!1.69e-07!86;UBERON:0007284!1.69e-07!86;UBERON:0005743!1.72e-07!86;UBERON:0002791!1.98e-07!33;UBERON:0002780!2.35e-07!41;UBERON:0001890!2.35e-07!41;UBERON:0006240!2.35e-07!41;UBERON:0002619!3.69e-07!22;UBERON:0003080!6.00e-07!42;UBERON:0001869!7.39e-07!32|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.67e-09,114;UBERON:0000073,1.75e-08,53;UBERON:0002616,1.75e-08,53;UBERON:0001049,6.06e-08,56;UBERON:0005068,6.06e-08,56;UBERON:0006241,6.06e-08,56;UBERON:0007135,6.06e-08,56;UBERON:0000955,1.58e-07,68;UBERON:0006238,1.58e-07,68;UBERON:0002780,2.83e-07,41;UBERON:0001890,2.83e-07,41;UBERON:0003080,2.83e-07,41;UBERON:0006240,2.83e-07,41;UBERON:0003075,3.10e-07,82;UBERON:0007284,3.10e-07,82;UBERON:0002038,6.99e-07,1;UBERON:0009661,6.99e-07,1;UBERON:0002950,6.99e-07,1;UBERON:0001891,6.99e-07,1;UBERON:0009616,6.99e-07,1;UBERON:0010286,6.99e-07,1;UBERON:0002134,7.82e-07,1;UBERON:0005208,7.82e-07,1;UBERON:0005946,7.82e-07,1;UBERON:0005965,7.82e-07,1;UBERON:0002078,7.82e-07,1;UBERON:0002346,8.47e-07,86;UBERON:0000941,8.75e-07,1;UBERON:0001785,8.75e-07,1;UBERON:0002464,8.75e-07,1;UBERON:0004904,8.75e-07,1;UBERON:0001021,8.75e-07,1;UBERON:0003902,8.75e-07,1;UBERON:0005425,8.75e-07,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0.764134057479513,0.738905305049512,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.401088894940283,0.434021741431704,0.671746422719773,0.32389366601898,0.515151135268373,0.581592955118259,0.755751887377619,2.18325655069035,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0.570025487482497,0,0.547992461293902,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,0.587237189370939,0,0,0,0,1.180258620683,0,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0.294605907474837,0.664601683750863,1.35401931882508,1.0247305578054,0.390178042679635,0.822189523018381,1.65810010671509,0.579606171470105,0.444859689486181,1.33770414044857,0,0.113309342697566,0.383220493601921,0.68725489096526,1.01207876807801,0,0,0,0,0.255973222308837,1.24930726552346,0.710331756132051,0.821127996921047,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.351339142772504,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.843881661206331,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.528290604079356,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.224170287987055,0.788123040807709,0,0.385029108839245,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0,0,0,0.415941723061614,0.356857977594324,0,0.35142424497814,0,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5846791..65846796,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:65846791..65846796,+ | |||
|id=chr11:65846791..65846796,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-07!140;CL:0002087!1.66e-07!119;CL:0002031!8.45e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.75e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-15!115;UBERON:0001049!4.65e-11!57;UBERON:0005068!4.65e-11!57;UBERON:0006241!4.65e-11!57;UBERON:0007135!4.65e-11!57;UBERON:0002346!1.60e-08!90;UBERON:0000073!1.97e-08!94;UBERON:0001016!1.97e-08!94;UBERON:0002616!3.04e-08!59;UBERON:0002020!5.08e-08!34;UBERON:0003528!5.08e-08!34;UBERON:0001017!5.93e-08!82;UBERON:0000955!6.58e-08!69;UBERON:0006238!6.58e-08!69;UBERON:0001893!1.39e-07!34;UBERON:0003075!1.69e-07!86;UBERON:0007284!1.69e-07!86;UBERON:0005743!1.72e-07!86;UBERON:0002791!1.98e-07!33;UBERON:0002780!2.35e-07!41;UBERON:0001890!2.35e-07!41;UBERON:0006240!2.35e-07!41;UBERON:0002619!3.69e-07!22;UBERON:0003080!6.00e-07!42;UBERON:0001869!7.39e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.67e-09,114;UBERON:0000073,1.75e-08,53;UBERON:0002616,1.75e-08,53;UBERON:0001049,6.06e-08,56;UBERON:0005068,6.06e-08,56;UBERON:0006241,6.06e-08,56;UBERON:0007135,6.06e-08,56;UBERON:0000955,1.58e-07,68;UBERON:0006238,1.58e-07,68;UBERON:0002780,2.83e-07,41;UBERON:0001890,2.83e-07,41;UBERON:0003080,2.83e-07,41;UBERON:0006240,2.83e-07,41;UBERON:0003075,3.10e-07,82;UBERON:0007284,3.10e-07,82;UBERON:0002038,6.99e-07,1;UBERON:0009661,6.99e-07,1;UBERON:0002950,6.99e-07,1;UBERON:0001891,6.99e-07,1;UBERON:0009616,6.99e-07,1;UBERON:0010286,6.99e-07,1;UBERON:0002134,7.82e-07,1;UBERON:0005208,7.82e-07,1;UBERON:0005946,7.82e-07,1;UBERON:0005965,7.82e-07,1;UBERON:0002078,7.82e-07,1;UBERON:0002346,8.47e-07,86;UBERON:0000941,8.75e-07,1;UBERON:0001785,8.75e-07,1;UBERON:0002464,8.75e-07,1;UBERON:0004904,8.75e-07,1;UBERON:0001021,8.75e-07,1;UBERON:0003902,8.75e-07,1;UBERON:0005425,8.75e-07,1 | |||
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| |||
|short_description=p@chr11:65846791..65846796,+ | |||
}} |
Revision as of 19:05, 10 September 2013
Short description: | p@chr11:65846791..65846796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:65846791..65846796, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.67e-09 | 114 |
regional part of nervous system | 1.75e-08 | 53 |
regional part of brain | 1.75e-08 | 53 |
neural tube | 6.06e-08 | 56 |
neural rod | 6.06e-08 | 56 |
future spinal cord | 6.06e-08 | 56 |
neural keel | 6.06e-08 | 56 |
brain | 1.58e-07 | 68 |
future brain | 1.58e-07 | 68 |
regional part of forebrain | 2.83e-07 | 41 |
forebrain | 2.83e-07 | 41 |
anterior neural tube | 2.83e-07 | 41 |
future forebrain | 2.83e-07 | 41 |
neural plate | 3.10e-07 | 82 |
presumptive neural plate | 3.10e-07 | 82 |
substantia nigra | 6.99e-07 | 1 |
midbrain nucleus | 6.99e-07 | 1 |
regional part of midbrain | 6.99e-07 | 1 |
midbrain | 6.99e-07 | 1 |
presumptive midbrain | 6.99e-07 | 1 |
midbrain neural tube | 6.99e-07 | 1 |
tricuspid valve | 7.82e-07 | 1 |
right atrium valve | 7.82e-07 | 1 |
outflow tract of atrium | 7.82e-07 | 1 |
outflow part of right atrium | 7.82e-07 | 1 |
right cardiac atrium | 7.82e-07 | 1 |
neurectoderm | 8.47e-07 | 86 |
cranial nerve II | 8.75e-07 | 1 |
cranial nerve | 8.75e-07 | 1 |
nerve trunk | 8.75e-07 | 1 |
nerve connecting eye with brain | 8.75e-07 | 1 |
nerve | 8.75e-07 | 1 |
retinal neural layer | 8.75e-07 | 1 |
presumptive neural retina | 8.75e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.