FFCP PHASE1:Hg19::chr12:57871853..57871879,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14130|TSSclassifier=S|UniProt=F8VW89|association_with_transcript=-11bp_to_ENST00000548139_5end|coexpression_cluster_id=C57|description=CAGE_peak_6_at_ARHGAP9_5end|id=chr12:57871853..57871879,-|ontology_enrichment_celltype=CL:0000037!1.17e-85!172;CL:0000566!1.17e-85!172;CL:0002032!2.76e-80!165;CL:0000837!2.76e-80!165;CL:0000988!1.27e-77!182;CL:0000738!2.56e-75!140;CL:0002087!7.61e-64!119;CL:0002031!6.88e-63!124;CL:0000763!9.66e-46!112;CL:0000049!9.66e-46!112;CL:0000766!3.03e-37!76;CL:0000557!2.59e-32!71;CL:0000839!9.38e-32!70;CL:0000542!9.67e-30!53;CL:0000051!9.67e-30!53;CL:0002194!1.94e-29!63;CL:0000576!1.94e-29!63;CL:0000040!1.94e-29!63;CL:0000559!1.94e-29!63;CL:0000838!2.86e-29!52;CL:0002009!4.83e-29!65;CL:0002057!3.14e-27!42;CL:0000860!3.06e-24!45;CL:0000134!2.68e-15!358;CL:0000084!2.96e-15!25;CL:0000827!2.96e-15!25;CL:0000791!3.14e-15!18;CL:0000789!3.14e-15!18;CL:0002420!3.14e-15!18;CL:0002419!3.14e-15!18;CL:0000790!3.14e-15!18;CL:0002320!3.90e-14!365;CL:0000945!5.28e-13!24;CL:0000826!5.28e-13!24;CL:0000219!1.89e-11!390;CL:0000236!1.90e-10!14;CL:0000625!9.04e-10!11;CL:0002393!1.66e-07!9;CL:0002397!1.66e-07!9;CL:0000624!7.63e-07!6;CL:0000034!7.96e-07!444|ontology_enrichment_celltype_v019=CL:0000576;1.00e-25;48!CL:0000860;3.87e-25;33!CL:0002057;3.87e-25;33!CL:0000766;2.74e-23;69!CL:0000473;5.04e-23;39!CL:0000234;5.04e-23;39!CL:0002087;1.27e-22;104!CL:0000542;1.76e-19;53!CL:0000791;4.88e-19;18!CL:0000789;4.88e-19;18!CL:0002419;4.88e-19;18!CL:0000738;1.01e-18;136!CL:0000763;3.28e-18;100!CL:0000084;4.57e-17;25!CL:0000988;2.58e-15;177!CL:0000945;6.91e-14;24!CL:0000625;3.27e-13;11!CL:0000236;7.72e-12;13!CL:0000624;6.06e-09;6!CL:0000219;1.26e-08;193!CL:0000094;3.01e-08;8!CL:0002393;3.62e-07;6!CL:0002397;3.62e-07;6|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-100,168;CL:0002032,9.04e-95,161;CL:0000837,9.04e-95,161;CL:0000988,1.61e-93,177;CL:0000738,8.76e-93,136;CL:0002087,2.01e-82,115;CL:0002031,3.27e-80,120;CL:0000763,2.55e-55,108;CL:0000049,2.55e-55,108;CL:0000766,1.03e-53,72;CL:0000557,1.44e-46,67;CL:0000839,2.25e-44,66;CL:0002194,2.59e-42,59;CL:0000576,2.59e-42,59;CL:0000040,2.59e-42,59;CL:0000559,2.59e-42,59;CL:0002009,6.70e-42,61;CL:0000473,6.76e-39,48;CL:0000234,6.76e-39,48;CL:0000860,1.47e-36,42;CL:0002057,1.47e-36,42;CL:0000542,2.34e-33,53;CL:0000051,2.34e-33,53;CL:0000838,1.09e-32,52;CL:0000134,2.55e-27,354;CL:0002320,4.59e-26,361;CL:0000219,1.11e-21,386;CL:0000791,4.29e-19,18;CL:0000789,4.29e-19,18;CL:0002420,4.29e-19,18;CL:0002419,4.29e-19,18;CL:0000790,4.29e-19,18;CL:0000084,4.29e-17,25;CL:0000827,4.29e-17,25;CL:0000034,1.36e-16,441;CL:0000048,2.03e-16,427;CL:0000723,1.05e-15,433;CL:0000945,8.64e-14,24;CL:0000826,8.64e-14,24;CL:0000625,3.55e-13,11;CL:0000236,5.54e-11,14;CL:0002393,5.58e-10,9;CL:0002397,5.58e-10,9;CL:0000624,4.80e-09,6;CL:0000094,2.49e-08,8|ontology_enrichment_development_v019=CL:0002057;3.46e-26;42!CL:0000051;1.76e-19;53!CL:0000790;4.88e-19;18!CL:0000049;4.53e-15;108|ontology_enrichment_disease=DOID:2531!5.07e-12!51;DOID:0060083!5.07e-12!51;DOID:1240!6.81e-12!39;DOID:8692!1.49e-09!31|ontology_enrichment_disease_v019=DOID:8692;5.23e-09;31!DOID:1240;5.07e-08;39|ontology_enrichment_disease_v019_2=DOID:1240,4.93e-10,39;DOID:2531,7.42e-10,51;DOID:0060083,7.42e-10,51;DOID:8692,2.98e-09,31|ontology_enrichment_uberon=UBERON:0002390!1.70e-36!102;UBERON:0003061!1.70e-36!102;UBERON:0002193!1.49e-32!112;UBERON:0002371!3.93e-27!80;UBERON:0001474!1.54e-23!86;UBERON:0002405!1.72e-18!115;UBERON:0004765!3.05e-17!101;UBERON:0001434!3.05e-17!101;UBERON:0002384!3.10e-13!375;UBERON:0007023!1.40e-09!115;UBERON:0000178!1.95e-07!15;UBERON:0000179!1.95e-07!15;UBERON:0000463!1.95e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-10;15!UBERON:0000179;1.38e-10;15!UBERON:0000463;1.38e-10;15!UBERON:0002390;1.84e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.63e-53,98;UBERON:0003061,2.63e-53,98;UBERON:0002193,6.59e-49,108;UBERON:0002371,2.17e-40,76;UBERON:0002405,7.00e-39,93;UBERON:0001474,5.34e-36,82;UBERON:0004765,4.43e-31,90;UBERON:0001434,4.46e-26,100;UBERON:0002384,2.32e-24,371;UBERON:0003081,2.92e-14,203;UBERON:0000178,1.51e-10,15;UBERON:0000179,1.51e-10,15;UBERON:0000463,1.51e-10,15;UBERON:0002204,6.67e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.23150884174919,1.25937250101887,4.32700704533794,4.60595277716655,5.26374819274658,0,0,0,1.31694240986513,0.995184627411951,2.93600439334847,3.32397245119126,4.61252229181326,4.55722828503289,1.56740831967947,3.2389366601898,1.80302897343931,3.34415949192999,1.88937971844405,2.91100873425379,4.18372266430232,3.70051099219643,3.40677007984614,4.89077066947656,3.58624989140741,2.36482229888585,4.48169384957604,7.10033151942209,0,4.32957380947991,3.27487380069415,2.69668181334102,3.67300670845083,1.92557416245656,2.55734850319616,2.96866170168044,4.58766412529753,3.83602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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |||
|TSSclassifier=S | |||
|UniProt=F8VW89 | |||
|association_with_transcript=-11bp_to_ENST00000548139_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_6_at_ARHGAP9_5end | |||
|id=chr12:57871853..57871879,- | |||
|ontology_enrichment_celltype=CL:0000037!1.17e-85!172;CL:0000566!1.17e-85!172;CL:0002032!2.76e-80!165;CL:0000837!2.76e-80!165;CL:0000988!1.27e-77!182;CL:0000738!2.56e-75!140;CL:0002087!7.61e-64!119;CL:0002031!6.88e-63!124;CL:0000763!9.66e-46!112;CL:0000049!9.66e-46!112;CL:0000766!3.03e-37!76;CL:0000557!2.59e-32!71;CL:0000839!9.38e-32!70;CL:0000542!9.67e-30!53;CL:0000051!9.67e-30!53;CL:0002194!1.94e-29!63;CL:0000576!1.94e-29!63;CL:0000040!1.94e-29!63;CL:0000559!1.94e-29!63;CL:0000838!2.86e-29!52;CL:0002009!4.83e-29!65;CL:0002057!3.14e-27!42;CL:0000860!3.06e-24!45;CL:0000134!2.68e-15!358;CL:0000084!2.96e-15!25;CL:0000827!2.96e-15!25;CL:0000791!3.14e-15!18;CL:0000789!3.14e-15!18;CL:0002420!3.14e-15!18;CL:0002419!3.14e-15!18;CL:0000790!3.14e-15!18;CL:0002320!3.90e-14!365;CL:0000945!5.28e-13!24;CL:0000826!5.28e-13!24;CL:0000219!1.89e-11!390;CL:0000236!1.90e-10!14;CL:0000625!9.04e-10!11;CL:0002393!1.66e-07!9;CL:0002397!1.66e-07!9;CL:0000624!7.63e-07!6;CL:0000034!7.96e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.00e-25;48!CL:0000860;3.87e-25;33!CL:0002057;3.87e-25;33!CL:0000766;2.74e-23;69!CL:0000473;5.04e-23;39!CL:0000234;5.04e-23;39!CL:0002087;1.27e-22;104!CL:0000542;1.76e-19;53!CL:0000791;4.88e-19;18!CL:0000789;4.88e-19;18!CL:0002419;4.88e-19;18!CL:0000738;1.01e-18;136!CL:0000763;3.28e-18;100!CL:0000084;4.57e-17;25!CL:0000988;2.58e-15;177!CL:0000945;6.91e-14;24!CL:0000625;3.27e-13;11!CL:0000236;7.72e-12;13!CL:0000624;6.06e-09;6!CL:0000219;1.26e-08;193!CL:0000094;3.01e-08;8!CL:0002393;3.62e-07;6!CL:0002397;3.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-100,168;CL:0002032,9.04e-95,161;CL:0000837,9.04e-95,161;CL:0000988,1.61e-93,177;CL:0000738,8.76e-93,136;CL:0002087,2.01e-82,115;CL:0002031,3.27e-80,120;CL:0000763,2.55e-55,108;CL:0000049,2.55e-55,108;CL:0000766,1.03e-53,72;CL:0000557,1.44e-46,67;CL:0000839,2.25e-44,66;CL:0002194,2.59e-42,59;CL:0000576,2.59e-42,59;CL:0000040,2.59e-42,59;CL:0000559,2.59e-42,59;CL:0002009,6.70e-42,61;CL:0000473,6.76e-39,48;CL:0000234,6.76e-39,48;CL:0000860,1.47e-36,42;CL:0002057,1.47e-36,42;CL:0000542,2.34e-33,53;CL:0000051,2.34e-33,53;CL:0000838,1.09e-32,52;CL:0000134,2.55e-27,354;CL:0002320,4.59e-26,361;CL:0000219,1.11e-21,386;CL:0000791,4.29e-19,18;CL:0000789,4.29e-19,18;CL:0002420,4.29e-19,18;CL:0002419,4.29e-19,18;CL:0000790,4.29e-19,18;CL:0000084,4.29e-17,25;CL:0000827,4.29e-17,25;CL:0000034,1.36e-16,441;CL:0000048,2.03e-16,427;CL:0000723,1.05e-15,433;CL:0000945,8.64e-14,24;CL:0000826,8.64e-14,24;CL:0000625,3.55e-13,11;CL:0000236,5.54e-11,14;CL:0002393,5.58e-10,9;CL:0002397,5.58e-10,9;CL:0000624,4.80e-09,6;CL:0000094,2.49e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-26;42!CL:0000051;1.76e-19;53!CL:0000790;4.88e-19;18!CL:0000049;4.53e-15;108 | |||
|ontology_enrichment_disease=DOID:2531!5.07e-12!51;DOID:0060083!5.07e-12!51;DOID:1240!6.81e-12!39;DOID:8692!1.49e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.23e-09;31!DOID:1240;5.07e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.93e-10,39;DOID:2531,7.42e-10,51;DOID:0060083,7.42e-10,51;DOID:8692,2.98e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-36!102;UBERON:0003061!1.70e-36!102;UBERON:0002193!1.49e-32!112;UBERON:0002371!3.93e-27!80;UBERON:0001474!1.54e-23!86;UBERON:0002405!1.72e-18!115;UBERON:0004765!3.05e-17!101;UBERON:0001434!3.05e-17!101;UBERON:0002384!3.10e-13!375;UBERON:0007023!1.40e-09!115;UBERON:0000178!1.95e-07!15;UBERON:0000179!1.95e-07!15;UBERON:0000463!1.95e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-10;15!UBERON:0000179;1.38e-10;15!UBERON:0000463;1.38e-10;15!UBERON:0002390;1.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.63e-53,98;UBERON:0003061,2.63e-53,98;UBERON:0002193,6.59e-49,108;UBERON:0002371,2.17e-40,76;UBERON:0002405,7.00e-39,93;UBERON:0001474,5.34e-36,82;UBERON:0004765,4.43e-31,90;UBERON:0001434,4.46e-26,100;UBERON:0002384,2.32e-24,371;UBERON:0003081,2.92e-14,203;UBERON:0000178,1.51e-10,15;UBERON:0000179,1.51e-10,15;UBERON:0000463,1.51e-10,15;UBERON:0002204,6.67e-09,167 | |||
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| |||
|short_description=p6@ARHGAP9 | |||
}} |
Revision as of 23:40, 10 September 2013
Short description: | p6@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARHGAP9_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -11bp_to_ENST00000548139_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | F8VW89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.63e-53 | 98 |
blood island | 2.63e-53 | 98 |
hemolymphoid system | 6.59e-49 | 108 |
bone marrow | 2.17e-40 | 76 |
immune system | 7.00e-39 | 93 |
bone element | 5.34e-36 | 82 |
skeletal element | 4.43e-31 | 90 |
skeletal system | 4.46e-26 | 100 |
connective tissue | 2.32e-24 | 371 |
lateral plate mesoderm | 2.92e-14 | 203 |
blood | 1.51e-10 | 15 |
haemolymphatic fluid | 1.51e-10 | 15 |
organism substance | 1.51e-10 | 15 |
musculoskeletal system | 6.67e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.93e-10 | 39 |
hematologic cancer | 7.42e-10 | 51 |
immune system cancer | 7.42e-10 | 51 |
myeloid leukemia | 2.98e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.