FFCP PHASE1:Hg19::chr12:72888865..72888869,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C15|description=CAGE_peak_at_chr12:72888865..72888869,+|id=chr12:72888865..72888869,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;3.57e-13;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.27e-08;2|ontology_enrichment_disease_v019_2=DOID:3307,8.00e-09,2|ontology_enrichment_uberon=UBERON:0007023!1.65e-19!115;UBERON:0002619!1.05e-18!22;UBERON:0001893!1.34e-18!34;UBERON:0002020!2.07e-18!34;UBERON:0003528!2.07e-18!34;UBERON:0001049!3.81e-18!57;UBERON:0005068!3.81e-18!57;UBERON:0006241!3.81e-18!57;UBERON:0007135!3.81e-18!57;UBERON:0001869!7.80e-18!32;UBERON:0002791!9.59e-18!33;UBERON:0001950!5.49e-17!20;UBERON:0000073!2.98e-16!94;UBERON:0001016!2.98e-16!94;UBERON:0002616!5.24e-16!59;UBERON:0003080!9.05e-16!42;UBERON:0000956!1.29e-15!25;UBERON:0000203!1.29e-15!25;UBERON:0002780!5.08e-15!41;UBERON:0001890!5.08e-15!41;UBERON:0006240!5.08e-15!41;UBERON:0000955!8.06e-15!69;UBERON:0006238!8.06e-15!69;UBERON:0001017!1.49e-14!82;UBERON:0005743!6.51e-14!86;UBERON:0002346!1.06e-13!90;UBERON:0003075!2.02e-11!86;UBERON:0007284!2.02e-11!86;UBERON:0003056!3.71e-09!61;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0000200!2.12e-07!6;UBERON:0000033!4.43e-07!123|ontology_enrichment_uberon_v019=UBERON:0001950;1.95e-23;20!UBERON:0002619;3.64e-21;22!UBERON:0000956;2.05e-18;25!UBERON:0000203;2.05e-18;25!UBERON:0002791;2.29e-15;32!UBERON:0001869;2.32e-15;32!UBERON:0003528;6.68e-14;34!UBERON:0002020;6.68e-14;34!UBERON:0001893;2.21e-13;34!UBERON:0002021;1.30e-12;5!UBERON:0001871;1.33e-08;6!UBERON:0002780;1.51e-08;41!UBERON:0001890;1.51e-08;41!UBERON:0002771;1.68e-08;2!UBERON:0003714;1.68e-08;2!UBERON:0000073;6.56e-08;53!UBERON:0002616;6.56e-08;53!UBERON:0002108;4.88e-07;4!UBERON:0002037;9.16e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.21e-23,20;UBERON:0002619,4.07e-21,22;UBERON:0000956,2.26e-18,25;UBERON:0000203,2.26e-18,25;UBERON:0002791,2.40e-16,32;UBERON:0001869,2.40e-16,32;UBERON:0003528,3.03e-15,34;UBERON:0002020,3.03e-15,34;UBERON:0001893,3.03e-15,34;UBERON:0000073,2.67e-14,53;UBERON:0002616,2.67e-14,53;UBERON:0001049,2.39e-13,56;UBERON:0005068,2.39e-13,56;UBERON:0006241,2.39e-13,56;UBERON:0007135,2.39e-13,56;UBERON:0002346,1.02e-12,86;UBERON:0002021,1.61e-12,5;UBERON:0002780,3.18e-12,41;UBERON:0001890,3.18e-12,41;UBERON:0003080,3.18e-12,41;UBERON:0006240,3.18e-12,41;UBERON:0007023,9.16e-11,114;UBERON:0003075,1.61e-10,82;UBERON:0007284,1.61e-10,82;UBERON:0001016,2.52e-10,89;UBERON:0000955,3.50e-10,68;UBERON:0006238,3.50e-10,68;UBERON:0001017,3.11e-09,81;UBERON:0003056,1.09e-08,61;UBERON:0003714,1.48e-08,2;UBERON:0001871,1.50e-08,6;UBERON:0002771,1.60e-08,2;UBERON:0010371,1.81e-07,104;UBERON:0002108,7.02e-07,4;UBERON:0002037,9.45e-07,6;UBERON:0006215,9.45e-07,6|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,1.4351170855109,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0.646584227275248,0,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.616838775210622,0,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0.546273504020151,0.655622074797121,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.6558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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr12:72888865..72888869,+ | |||
|id=chr12:72888865..72888869,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.57e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.00e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-19!115;UBERON:0002619!1.05e-18!22;UBERON:0001893!1.34e-18!34;UBERON:0002020!2.07e-18!34;UBERON:0003528!2.07e-18!34;UBERON:0001049!3.81e-18!57;UBERON:0005068!3.81e-18!57;UBERON:0006241!3.81e-18!57;UBERON:0007135!3.81e-18!57;UBERON:0001869!7.80e-18!32;UBERON:0002791!9.59e-18!33;UBERON:0001950!5.49e-17!20;UBERON:0000073!2.98e-16!94;UBERON:0001016!2.98e-16!94;UBERON:0002616!5.24e-16!59;UBERON:0003080!9.05e-16!42;UBERON:0000956!1.29e-15!25;UBERON:0000203!1.29e-15!25;UBERON:0002780!5.08e-15!41;UBERON:0001890!5.08e-15!41;UBERON:0006240!5.08e-15!41;UBERON:0000955!8.06e-15!69;UBERON:0006238!8.06e-15!69;UBERON:0001017!1.49e-14!82;UBERON:0005743!6.51e-14!86;UBERON:0002346!1.06e-13!90;UBERON:0003075!2.02e-11!86;UBERON:0007284!2.02e-11!86;UBERON:0003056!3.71e-09!61;UBERON:0000924!4.79e-08!173;UBERON:0006601!4.79e-08!173;UBERON:0000200!2.12e-07!6;UBERON:0000033!4.43e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.95e-23;20!UBERON:0002619;3.64e-21;22!UBERON:0000956;2.05e-18;25!UBERON:0000203;2.05e-18;25!UBERON:0002791;2.29e-15;32!UBERON:0001869;2.32e-15;32!UBERON:0003528;6.68e-14;34!UBERON:0002020;6.68e-14;34!UBERON:0001893;2.21e-13;34!UBERON:0002021;1.30e-12;5!UBERON:0001871;1.33e-08;6!UBERON:0002780;1.51e-08;41!UBERON:0001890;1.51e-08;41!UBERON:0002771;1.68e-08;2!UBERON:0003714;1.68e-08;2!UBERON:0000073;6.56e-08;53!UBERON:0002616;6.56e-08;53!UBERON:0002108;4.88e-07;4!UBERON:0002037;9.16e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.21e-23,20;UBERON:0002619,4.07e-21,22;UBERON:0000956,2.26e-18,25;UBERON:0000203,2.26e-18,25;UBERON:0002791,2.40e-16,32;UBERON:0001869,2.40e-16,32;UBERON:0003528,3.03e-15,34;UBERON:0002020,3.03e-15,34;UBERON:0001893,3.03e-15,34;UBERON:0000073,2.67e-14,53;UBERON:0002616,2.67e-14,53;UBERON:0001049,2.39e-13,56;UBERON:0005068,2.39e-13,56;UBERON:0006241,2.39e-13,56;UBERON:0007135,2.39e-13,56;UBERON:0002346,1.02e-12,86;UBERON:0002021,1.61e-12,5;UBERON:0002780,3.18e-12,41;UBERON:0001890,3.18e-12,41;UBERON:0003080,3.18e-12,41;UBERON:0006240,3.18e-12,41;UBERON:0007023,9.16e-11,114;UBERON:0003075,1.61e-10,82;UBERON:0007284,1.61e-10,82;UBERON:0001016,2.52e-10,89;UBERON:0000955,3.50e-10,68;UBERON:0006238,3.50e-10,68;UBERON:0001017,3.11e-09,81;UBERON:0003056,1.09e-08,61;UBERON:0003714,1.48e-08,2;UBERON:0001871,1.50e-08,6;UBERON:0002771,1.60e-08,2;UBERON:0010371,1.81e-07,104;UBERON:0002108,7.02e-07,4;UBERON:0002037,9.45e-07,6;UBERON:0006215,9.45e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,1.4351170855109,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0.646584227275248,0,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.616838775210622,0,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.114814448164607,0.546273504020151,0.655622074797121,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,1.11838053946208,3.17013369252626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.11308705022906,0,102.395822942077,0.597743964753209,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0,0,0,8.74813840149763,0,0,0.482385754501632,9.15490417902499,5.63954225649246,8.27533333069933,0.658156191461918,0,0,1.00035336054936,0,0.23056390438806,0.807818799687949,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32487321611653,0,0,0.995261931078505,1.59223616106011,0.611030144933625,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,2.36750641709634,1.20990716048664,1.22429104652196,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,0,1.09633539717401,1.39100228192093,1.58276989889697,0,0.0801588202515337,0.213452994739353,0,0,0,5.14784993585894,0,0,0,0,0,0.509991088181609,0,0,0.547621515567972,0,0.429765441419957,0,0.837847203816763,0,2.15361907373044,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.275078873194468,0,0,0,0.850493793212345,0.335434687599266,0.551639951094387,0.577000469484979,2.95680942254338,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,2.13440553948281,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,1.63936315354902,0,3.54427271986794,2.56255156294123,0.751145584238999,0,0.332787154610557,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,1.65882483136342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0.537266523244462,0,0,0.353378291891762,0,0,0,0,0,1.24432592536558,0,0.265729680626726,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0.471797825567689,0.218419276384028,0.678930119816101,8.29042188396563,5.9489166844321,2.23457967189298,0,0,0,0,1.2249819094128,0.578063025868136,2.8339315265117,3.35231104020018,2.66651273512982,1.00828678488687,0.691572524642179,1.29180516505481,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,3.12605604493237,1.04762677792569,0,0,0.945526184657525,2.34323429584154,2.27355476151302,0.951237152908602,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0,0.203909198930495,0.657727735628491,0,0.778619813244484,0.156986185701028,1.09980912941201,0,1.82631744101899,0,0.9555033757741,0.142953088353313,0,0,0,1.60342272946051,0,0,0,0,0.473328002922261,0.340853619036631,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0.121917924982269,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0.549702583727146,0,1.31196068783506,1.09279780251979,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0.352894871715692,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0.543931921527318,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0.09189489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| |||
|short_description=p@chr12:72888865..72888869,+ | |||
}} |
Revision as of 00:24, 11 September 2013
Short description: | p@chr12:72888865..72888869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:72888865..72888869, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 2.21e-23 | 20 |
regional part of cerebral cortex | 4.07e-21 | 22 |
cerebral cortex | 2.26e-18 | 25 |
pallium | 2.26e-18 | 25 |
regional part of telencephalon | 2.40e-16 | 32 |
cerebral hemisphere | 2.40e-16 | 32 |
brain grey matter | 3.03e-15 | 34 |
gray matter | 3.03e-15 | 34 |
telencephalon | 3.03e-15 | 34 |
regional part of nervous system | 2.67e-14 | 53 |
regional part of brain | 2.67e-14 | 53 |
neural tube | 2.39e-13 | 56 |
neural rod | 2.39e-13 | 56 |
future spinal cord | 2.39e-13 | 56 |
neural keel | 2.39e-13 | 56 |
neurectoderm | 1.02e-12 | 86 |
occipital lobe | 1.61e-12 | 5 |
regional part of forebrain | 3.18e-12 | 41 |
forebrain | 3.18e-12 | 41 |
anterior neural tube | 3.18e-12 | 41 |
future forebrain | 3.18e-12 | 41 |
adult organism | 9.16e-11 | 114 |
neural plate | 1.61e-10 | 82 |
presumptive neural plate | 1.61e-10 | 82 |
nervous system | 2.52e-10 | 89 |
brain | 3.50e-10 | 68 |
future brain | 3.50e-10 | 68 |
central nervous system | 3.11e-09 | 81 |
pre-chordal neural plate | 1.09e-08 | 61 |
neural tissue | 1.48e-08 | 2 |
temporal lobe | 1.50e-08 | 6 |
middle temporal gyrus | 1.60e-08 | 2 |
ecto-epithelium | 1.81e-07 | 104 |
small intestine | 7.02e-07 | 4 |
cerebellum | 9.45e-07 | 6 |
rhombic lip | 9.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.00e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.