FFCP PHASE1:Hg19::chr20:10198736..10198748,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C11|description=CAGE_peak_at_chr20:10198736..10198748,-|id=chr20:10198736..10198748,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;7.36e-18;1!CL:0000164;7.36e-18;1!CL:0000502;7.36e-18;1!CL:0000172;7.36e-18;1!CL:0000173;7.36e-18;1!CL:0002600;1.33e-09;2|ontology_enrichment_celltype_v019_2=CL:0000167,1.70e-17,1;CL:0000164,1.70e-17,1;CL:0000502,1.70e-17,1;CL:0000172,1.70e-17,1;CL:0000173,1.70e-17,1;CL:0002351,1.70e-17,1;CL:0002600,1.44e-09,2|ontology_enrichment_development_v019=UBERON:0006215;2.63e-50;3!CL:0002351;7.36e-18;1|ontology_enrichment_disease=DOID:2394!7.54e-07!14|ontology_enrichment_disease_v019=DOID:4430;7.36e-18;1!DOID:3307;1.33e-09;2|ontology_enrichment_disease_v019_2=DOID:4430,1.70e-17,1;DOID:3307,8.69e-10,2|ontology_enrichment_uberon=UBERON:0001049!2.50e-31!57;UBERON:0005068!2.50e-31!57;UBERON:0006241!2.50e-31!57;UBERON:0007135!2.50e-31!57;UBERON:0002616!7.15e-30!59;UBERON:0005743!4.96e-29!86;UBERON:0001017!6.88e-28!82;UBERON:0000073!1.79e-26!94;UBERON:0001016!1.79e-26!94;UBERON:0000955!7.24e-25!69;UBERON:0006238!7.24e-25!69;UBERON:0003075!1.03e-24!86;UBERON:0007284!1.03e-24!86;UBERON:0002780!2.67e-23!41;UBERON:0001890!2.67e-23!41;UBERON:0006240!2.67e-23!41;UBERON:0002346!4.83e-23!90;UBERON:0003080!1.48e-22!42;UBERON:0001893!8.64e-21!34;UBERON:0002791!1.29e-19!33;UBERON:0002020!4.36e-19!34;UBERON:0003528!4.36e-19!34;UBERON:0001869!1.09e-18!32;UBERON:0003056!4.02e-18!61;UBERON:0000033!6.03e-18!123;UBERON:0007023!7.94e-17!115;UBERON:0000153!1.71e-16!129;UBERON:0007811!1.71e-16!129;UBERON:0004121!1.23e-15!169;UBERON:0002619!1.63e-15!22;UBERON:0000924!6.24e-15!173;UBERON:0006601!6.24e-15!173;UBERON:0000956!7.04e-15!25;UBERON:0000203!7.04e-15!25;UBERON:0001950!6.43e-13!20;UBERON:0004733!2.13e-10!12;UBERON:0002028!2.13e-10!12;UBERON:0007277!2.13e-10!12;UBERON:0003076!7.35e-10!15;UBERON:0003057!7.35e-10!15;UBERON:0004732!1.94e-09!13;UBERON:0002680!2.15e-09!9;UBERON:0001895!2.15e-09!9;UBERON:0010092!2.15e-09!9;UBERON:0000477!4.62e-09!286;UBERON:0004111!6.62e-08!241;UBERON:0002037!6.71e-08!6;UBERON:0006215!6.71e-08!6;UBERON:0000119!7.53e-08!312;UBERON:0000025!1.04e-07!194;UBERON:0000483!1.13e-07!309;UBERON:0000481!2.67e-07!347;UBERON:0000475!2.95e-07!365|ontology_enrichment_uberon_v019=UBERON:0002037;1.41e-25;6!UBERON:0001000;7.36e-18;1!UBERON:0005352;7.36e-18;1!UBERON:0002680;2.68e-17;9!UBERON:0001895;2.68e-17;9!UBERON:0004733;3.84e-13;12!UBERON:0002028;3.84e-13;12!UBERON:0004732;3.52e-12;13!UBERON:0001905;1.33e-09;2!UBERON:0002757;1.33e-09;2!UBERON:0010134;1.33e-09;2!UBERON:0005408;1.33e-09;2!UBERON:0001899;1.33e-09;2!UBERON:0006947;8.14e-07;3!UBERON:0004054;8.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.41e-25,6;UBERON:0006215,1.41e-25,6;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0002680,2.68e-17,9;UBERON:0001895,2.68e-17,9;UBERON:0010092,2.68e-17,9;UBERON:0004733,3.85e-13,12;UBERON:0002028,3.85e-13,12;UBERON:0007277,3.85e-13,12;UBERON:0004732,3.53e-12,13;UBERON:0000073,6.83e-11,53;UBERON:0002616,6.83e-11,53;UBERON:0003076,1.23e-10,15;UBERON:0003057,1.23e-10,15;UBERON:0001049,2.62e-10,56;UBERON:0005068,2.62e-10,56;UBERON:0006241,2.62e-10,56;UBERON:0007135,2.62e-10,56;UBERON:0001905,1.22e-09,2;UBERON:0002757,1.22e-09,2;UBERON:0010134,1.22e-09,2;UBERON:0005408,1.22e-09,2;UBERON:0001899,1.22e-09,2;UBERON:0000955,2.38e-08,68;UBERON:0006238,2.38e-08,68;UBERON:0001017,5.31e-07,81;UBERON:0003075,5.31e-07,82;UBERON:0007284,5.31e-07,82;UBERON:0006947,9.64e-07,3;UBERON:0004054,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr20:10198736..10198748,- | |||
|id=chr20:10198736..10198748,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.36e-18;1!CL:0000164;7.36e-18;1!CL:0000502;7.36e-18;1!CL:0000172;7.36e-18;1!CL:0000173;7.36e-18;1!CL:0002600;1.33e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.70e-17,1;CL:0000164,1.70e-17,1;CL:0000502,1.70e-17,1;CL:0000172,1.70e-17,1;CL:0000173,1.70e-17,1;CL:0002351,1.70e-17,1;CL:0002600,1.44e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.63e-50;3!CL:0002351;7.36e-18;1 | |||
|ontology_enrichment_disease=DOID:2394!7.54e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;7.36e-18;1!DOID:3307;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.70e-17,1;DOID:3307,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.50e-31!57;UBERON:0005068!2.50e-31!57;UBERON:0006241!2.50e-31!57;UBERON:0007135!2.50e-31!57;UBERON:0002616!7.15e-30!59;UBERON:0005743!4.96e-29!86;UBERON:0001017!6.88e-28!82;UBERON:0000073!1.79e-26!94;UBERON:0001016!1.79e-26!94;UBERON:0000955!7.24e-25!69;UBERON:0006238!7.24e-25!69;UBERON:0003075!1.03e-24!86;UBERON:0007284!1.03e-24!86;UBERON:0002780!2.67e-23!41;UBERON:0001890!2.67e-23!41;UBERON:0006240!2.67e-23!41;UBERON:0002346!4.83e-23!90;UBERON:0003080!1.48e-22!42;UBERON:0001893!8.64e-21!34;UBERON:0002791!1.29e-19!33;UBERON:0002020!4.36e-19!34;UBERON:0003528!4.36e-19!34;UBERON:0001869!1.09e-18!32;UBERON:0003056!4.02e-18!61;UBERON:0000033!6.03e-18!123;UBERON:0007023!7.94e-17!115;UBERON:0000153!1.71e-16!129;UBERON:0007811!1.71e-16!129;UBERON:0004121!1.23e-15!169;UBERON:0002619!1.63e-15!22;UBERON:0000924!6.24e-15!173;UBERON:0006601!6.24e-15!173;UBERON:0000956!7.04e-15!25;UBERON:0000203!7.04e-15!25;UBERON:0001950!6.43e-13!20;UBERON:0004733!2.13e-10!12;UBERON:0002028!2.13e-10!12;UBERON:0007277!2.13e-10!12;UBERON:0003076!7.35e-10!15;UBERON:0003057!7.35e-10!15;UBERON:0004732!1.94e-09!13;UBERON:0002680!2.15e-09!9;UBERON:0001895!2.15e-09!9;UBERON:0010092!2.15e-09!9;UBERON:0000477!4.62e-09!286;UBERON:0004111!6.62e-08!241;UBERON:0002037!6.71e-08!6;UBERON:0006215!6.71e-08!6;UBERON:0000119!7.53e-08!312;UBERON:0000025!1.04e-07!194;UBERON:0000483!1.13e-07!309;UBERON:0000481!2.67e-07!347;UBERON:0000475!2.95e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.41e-25;6!UBERON:0001000;7.36e-18;1!UBERON:0005352;7.36e-18;1!UBERON:0002680;2.68e-17;9!UBERON:0001895;2.68e-17;9!UBERON:0004733;3.84e-13;12!UBERON:0002028;3.84e-13;12!UBERON:0004732;3.52e-12;13!UBERON:0001905;1.33e-09;2!UBERON:0002757;1.33e-09;2!UBERON:0010134;1.33e-09;2!UBERON:0005408;1.33e-09;2!UBERON:0001899;1.33e-09;2!UBERON:0006947;8.14e-07;3!UBERON:0004054;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.41e-25,6;UBERON:0006215,1.41e-25,6;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0002680,2.68e-17,9;UBERON:0001895,2.68e-17,9;UBERON:0010092,2.68e-17,9;UBERON:0004733,3.85e-13,12;UBERON:0002028,3.85e-13,12;UBERON:0007277,3.85e-13,12;UBERON:0004732,3.53e-12,13;UBERON:0000073,6.83e-11,53;UBERON:0002616,6.83e-11,53;UBERON:0003076,1.23e-10,15;UBERON:0003057,1.23e-10,15;UBERON:0001049,2.62e-10,56;UBERON:0005068,2.62e-10,56;UBERON:0006241,2.62e-10,56;UBERON:0007135,2.62e-10,56;UBERON:0001905,1.22e-09,2;UBERON:0002757,1.22e-09,2;UBERON:0010134,1.22e-09,2;UBERON:0005408,1.22e-09,2;UBERON:0001899,1.22e-09,2;UBERON:0000955,2.38e-08,68;UBERON:0006238,2.38e-08,68;UBERON:0001017,5.31e-07,81;UBERON:0003075,5.31e-07,82;UBERON:0007284,5.31e-07,82;UBERON:0006947,9.64e-07,3;UBERON:0004054,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,1.31178950409327,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,1.33570446027487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,1.52581736317083,6.96649337566715,1.18219047581419,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.202203398942031,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.272406812223151,0.160753148465019,0.412618309791701,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.751288044986092,0,0.406870733204662,0.363697318405119,0.537052785212442,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.319267718114302,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0,0,0,0,0.535701835878287,1.3451348888753,0,0.227662191351298,0,0,0.342976018874837,0.271878931907327,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0.47775168788705,0.357382720883282,0,0,0,1.60342272946051,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,0.301925687133347,0,0,0.470317296361523,0,1.17838273550813,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:10198736..10198748,- | |||
}} |
Revision as of 07:26, 12 September 2013
Short description: | p@chr20:10198736..10198748, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:10198736..10198748, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.70e-17 | 1 |
enteroendocrine cell | 1.70e-17 | 1 |
type D enteroendocrine cell | 1.70e-17 | 1 |
somatostatin secreting cell | 1.70e-17 | 1 |
pancreatic D cell | 1.70e-17 | 1 |
progenitor cell of endocrine pancreas | 1.70e-17 | 1 |
smooth muscle cell of trachea | 1.44e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.41e-25 | 6 |
rhombic lip | 1.41e-25 | 6 |
vas deferens | 1.22e-17 | 1 |
spermatic cord | 1.22e-17 | 1 |
regional part of metencephalon | 2.68e-17 | 9 |
metencephalon | 2.68e-17 | 9 |
future metencephalon | 2.68e-17 | 9 |
segmental subdivision of hindbrain | 3.85e-13 | 12 |
hindbrain | 3.85e-13 | 12 |
presumptive hindbrain | 3.85e-13 | 12 |
segmental subdivision of nervous system | 3.53e-12 | 13 |
regional part of nervous system | 6.83e-11 | 53 |
regional part of brain | 6.83e-11 | 53 |
posterior neural tube | 1.23e-10 | 15 |
chordal neural plate | 1.23e-10 | 15 |
neural tube | 2.62e-10 | 56 |
neural rod | 2.62e-10 | 56 |
future spinal cord | 2.62e-10 | 56 |
neural keel | 2.62e-10 | 56 |
pineal body | 1.22e-09 | 2 |
regional part of epithalamus | 1.22e-09 | 2 |
secretory circumventricular organ | 1.22e-09 | 2 |
circumventricular organ | 1.22e-09 | 2 |
epithalamus | 1.22e-09 | 2 |
brain | 2.38e-08 | 68 |
future brain | 2.38e-08 | 68 |
central nervous system | 5.31e-07 | 81 |
neural plate | 5.31e-07 | 82 |
presumptive neural plate | 5.31e-07 | 82 |
male genital duct | 9.64e-07 | 3 |
internal male genitalia | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.70e-17 | 1 |
teratoma | 8.69e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.