FFCP PHASE1:Hg19::chr21:45285082..45285117,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=326 | |||
|TSSclassifier=S | |||
|UniProt=Q9NRZ7 | |||
|association_with_transcript=0bp_to_NM_020132,uc002zdv.2_5end | |||
|description=CAGE_peak_1_at_AGPAT3_5end | |||
|id=chr21:45285082..45285117,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.42e-12!42;CL:0000860!2.48e-10!45;CL:0002009!9.52e-09!65;CL:0000557!3.78e-08!71;CL:0002194!4.69e-08!63;CL:0000576!4.69e-08!63;CL:0000040!4.69e-08!63;CL:0000559!4.69e-08!63;CL:0000763!8.09e-08!112;CL:0000049!8.09e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-07;33!CL:0002057;2.26e-07;33!CL:0000576;8.66e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-12,42;CL:0002057,3.41e-12,42;CL:0000473,1.23e-11,48;CL:0000234,1.23e-11,48;CL:0002009,3.53e-10,61;CL:0002194,1.98e-09,59;CL:0000576,1.98e-09,59;CL:0000040,1.98e-09,59;CL:0000559,1.98e-09,59;CL:0000557,2.01e-09,67;CL:0000763,8.76e-09,108;CL:0000049,8.76e-09,108;CL:0000839,1.14e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;7.70e-11;34!UBERON:0001869;1.09e-10;32!UBERON:0002791;1.39e-10;32!UBERON:0003528;2.72e-10;34!UBERON:0002020;2.72e-10;34!UBERON:0000073;9.42e-09;53!UBERON:0002616;9.42e-09;53!UBERON:0002780;1.09e-08;41!UBERON:0001890;1.09e-08;41!UBERON:0000956;1.34e-08;25!UBERON:0000203;1.34e-08;25!UBERON:0002619;1.92e-08;22!UBERON:0001950;7.73e-08;20!UBERON:0000955;4.74e-07;68!UBERON:0001017;4.90e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.08e-15,56;UBERON:0005068,1.08e-15,56;UBERON:0006241,1.08e-15,56;UBERON:0007135,1.08e-15,56;UBERON:0000073,2.77e-14,53;UBERON:0002616,2.77e-14,53;UBERON:0000955,1.09e-13,68;UBERON:0006238,1.09e-13,68;UBERON:0001017,8.36e-13,81;UBERON:0001893,5.13e-12,34;UBERON:0003528,1.36e-11,34;UBERON:0002020,1.36e-11,34;UBERON:0001869,3.05e-11,32;UBERON:0002791,5.15e-11,32;UBERON:0002780,5.68e-11,41;UBERON:0001890,5.68e-11,41;UBERON:0003080,5.68e-11,41;UBERON:0006240,5.68e-11,41;UBERON:0001016,2.29e-10,89;UBERON:0003075,2.74e-10,82;UBERON:0007284,2.74e-10,82;UBERON:0002346,2.42e-09,86;UBERON:0002193,4.82e-09,108;UBERON:0002390,8.95e-09,98;UBERON:0003061,8.95e-09,98;UBERON:0002405,2.25e-08,93;UBERON:0002619,2.87e-08,22;UBERON:0000956,3.16e-08,25;UBERON:0000203,3.16e-08,25;UBERON:0003056,6.65e-08,61;UBERON:0002371,6.93e-08,76;UBERON:0001950,1.03e-07,20;UBERON:0001474,3.02e-07,82;UBERON:0000025,4.29e-07,192 | |||
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| |||
|short_description=p1@AGPAT3 | |||
}} |
Revision as of 10:37, 12 September 2013
Short description: | p1@AGPAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AGPAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_020132, uc002zdv.2_5end |
EntrezGene: | AGPAT3 |
HGNC: | 326 |
UniProt: | Q9NRZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.41e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-12 | 42 |
defensive cell | 1.23e-11 | 48 |
phagocyte | 1.23e-11 | 48 |
macrophage dendritic cell progenitor | 3.53e-10 | 61 |
monopoietic cell | 1.98e-09 | 59 |
monocyte | 1.98e-09 | 59 |
monoblast | 1.98e-09 | 59 |
promonocyte | 1.98e-09 | 59 |
granulocyte monocyte progenitor cell | 2.01e-09 | 67 |
myeloid cell | 8.76e-09 | 108 |
common myeloid progenitor | 8.76e-09 | 108 |
myeloid lineage restricted progenitor cell | 1.14e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.08e-15 | 56 |
neural rod | 1.08e-15 | 56 |
future spinal cord | 1.08e-15 | 56 |
neural keel | 1.08e-15 | 56 |
regional part of nervous system | 2.77e-14 | 53 |
regional part of brain | 2.77e-14 | 53 |
brain | 1.09e-13 | 68 |
future brain | 1.09e-13 | 68 |
central nervous system | 8.36e-13 | 81 |
telencephalon | 5.13e-12 | 34 |
brain grey matter | 1.36e-11 | 34 |
gray matter | 1.36e-11 | 34 |
cerebral hemisphere | 3.05e-11 | 32 |
regional part of telencephalon | 5.15e-11 | 32 |
regional part of forebrain | 5.68e-11 | 41 |
forebrain | 5.68e-11 | 41 |
anterior neural tube | 5.68e-11 | 41 |
future forebrain | 5.68e-11 | 41 |
nervous system | 2.29e-10 | 89 |
neural plate | 2.74e-10 | 82 |
presumptive neural plate | 2.74e-10 | 82 |
neurectoderm | 2.42e-09 | 86 |
hemolymphoid system | 4.82e-09 | 108 |
hematopoietic system | 8.95e-09 | 98 |
blood island | 8.95e-09 | 98 |
immune system | 2.25e-08 | 93 |
regional part of cerebral cortex | 2.87e-08 | 22 |
cerebral cortex | 3.16e-08 | 25 |
pallium | 3.16e-08 | 25 |
pre-chordal neural plate | 6.65e-08 | 61 |
bone marrow | 6.93e-08 | 76 |
neocortex | 1.03e-07 | 20 |
bone element | 3.02e-07 | 82 |
tube | 4.29e-07 | 192 |
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