FFCP PHASE1:Mm9::chr10:120748063..120748087,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74694|HGNC=|MCL_coexpression_id=1|UniProt=Q69ZT9|association_with_transcript=157bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end|description=CAGE_peak_2_at_Tbc1d30_5end|id=chr10:120748063..120748087,-|ontology_enrichment_celltype=CL:0000117!1.98e-13!23;CL:0000337!1.98e-13!23;CL:0000540!2.09e-09!33;CL:0000047!2.09e-09!33;CL:0000031!2.09e-09!33;CL:0000404!2.09e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-18,23;CL:0000337,5.26e-18,23;CL:0000540,1.75e-11,33;CL:0000047,1.75e-11,33;CL:0000031,1.75e-11,33;CL:0000404,1.75e-11,33;CL:0000393,2.07e-08,39;CL:0000211,2.07e-08,39;CL:0000221,3.39e-07,44;CL:0000133,3.39e-07,44;CL:0002319,6.78e-07,43;CL:0000791,6.94e-07,9;CL:0000789,6.94e-07,9;CL:0002420,6.94e-07,9;CL:0002419,6.94e-07,9;CL:0000790,6.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.25e-21!52;UBERON:0005068!4.25e-21!52;UBERON:0006241!4.25e-21!52;UBERON:0007135!4.25e-21!52;UBERON:0000033!4.30e-20!63;UBERON:0000955!1.70e-19!50;UBERON:0006238!1.70e-19!50;UBERON:0001017!3.28e-19!73;UBERON:0005743!3.28e-19!73;UBERON:0000073!3.50e-19!75;UBERON:0001016!3.50e-19!75;UBERON:0002346!3.98e-19!71;UBERON:0003075!3.98e-19!71;UBERON:0007284!3.98e-19!71;UBERON:0002616!5.86e-19!49;UBERON:0003056!1.05e-18!49;UBERON:0002020!1.40e-18!34;UBERON:0004121!4.80e-17!102;UBERON:0000924!4.80e-17!102;UBERON:0006601!4.80e-17!102;UBERON:0003080!6.49e-17!40;UBERON:0002780!2.75e-16!39;UBERON:0001890!2.75e-16!39;UBERON:0006240!2.75e-16!39;UBERON:0007811!1.40e-15!86;UBERON:0002791!1.80e-15!29;UBERON:0003528!1.80e-15!29;UBERON:0001893!1.80e-15!29;UBERON:0000153!6.88e-13!94;UBERON:0000956!4.04e-11!21;UBERON:0001869!4.04e-11!21;UBERON:0000203!4.04e-11!21;UBERON:0002619!3.79e-09!17;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0000025!6.39e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.14e-25,34;UBERON:0000073,5.22e-25,54;UBERON:0002346,9.70e-25,64;UBERON:0003075,9.70e-25,64;UBERON:0007284,9.70e-25,64;UBERON:0001049,1.32e-23,52;UBERON:0005068,1.32e-23,52;UBERON:0006241,1.32e-23,52;UBERON:0007135,1.32e-23,52;UBERON:0010371,3.83e-22,73;UBERON:0001017,1.06e-21,73;UBERON:0003528,6.54e-21,29;UBERON:0002791,6.54e-21,29;UBERON:0001893,6.54e-21,29;UBERON:0001016,1.31e-20,75;UBERON:0004121,1.40e-20,95;UBERON:0000924,1.40e-20,95;UBERON:0006601,1.40e-20,95;UBERON:0000955,2.23e-19,47;UBERON:0006238,2.23e-19,47;UBERON:0003056,2.85e-19,49;UBERON:0002616,1.09e-18,46;UBERON:0003080,3.79e-17,40;UBERON:0002780,2.41e-16,39;UBERON:0001890,2.41e-16,39;UBERON:0006240,2.41e-16,39;UBERON:0000956,7.14e-15,21;UBERON:0001869,7.14e-15,21;UBERON:0000203,7.14e-15,21;UBERON:0010314,2.00e-12,92;UBERON:0002619,3.85e-12,17;UBERON:0002021,2.51e-11,10;UBERON:0000411,2.51e-11,10;UBERON:0001950,2.51e-11,10;UBERON:0000025,1.49e-07,114;UBERON:0002420,3.30e-07,8;UBERON:0007245,3.30e-07,8;UBERON:0010009,3.30e-07,8;UBERON:0010011,3.30e-07,8;UBERON:0000454,3.30e-07,8;UBERON:0003076,4.18e-07,12;UBERON:0003057,4.18e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,10.2007425518845,14.36044965947,4.91535505276186,8.21846247482424,1.43589886191606,4.62241970814255,4.45844052336887,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.99703463710028,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,8.70434570413613,4.7053131879945,0,0,0,10.9250888864183,11.1088105647127,12.0427966666174,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0,0,5.59923906465779,4.86021377994086,6.30974884054146,8.56952953211411,7.06779331045163,6.85948475603743,5.55903731905771,8.27296907949019,4.40463523997555,9.95961237064464,8.90917892886212,11.0784481693363,6.12967212136145,8.33461392890816,8.93385596804419,6.19038871034848,7.33431589328689,11.1958862479994,11.10499110233,13.6071595452469,0.302904773332736,0.68014404096107,0,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0.842666520790511,0,0,0,1.69012103732017,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,0.68510327831436,1.03575153458869,0.29688427812965,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.07620470735796,9.63454851341893,0,0,0,0,10.4853447583376,8.23501085073528,12.1884721549478,15.4703644971126,15.8543583544805,5.61027720310812,11.1946471516753,0,0.248813941220186,0.252722758433675,4.20883711772948,0,0.919608417733892,1.98068342785884,1.20563854268572,4.55844544313897,3.33095672740609,3.37326208415024,8.53721123438752,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.584799949701329,0,0.268412837520744,9.04246778825747,7.51203670368776,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,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| ||
|EntrezGene=74694 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q69ZT9 | |||
|association_with_transcript=157bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end | |||
|description=CAGE_peak_2_at_Tbc1d30_5end | |||
|id=chr10:120748063..120748087,- | |||
|ontology_enrichment_celltype=CL:0000117!1.98e-13!23;CL:0000337!1.98e-13!23;CL:0000540!2.09e-09!33;CL:0000047!2.09e-09!33;CL:0000031!2.09e-09!33;CL:0000404!2.09e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-18,23;CL:0000337,5.26e-18,23;CL:0000540,1.75e-11,33;CL:0000047,1.75e-11,33;CL:0000031,1.75e-11,33;CL:0000404,1.75e-11,33;CL:0000393,2.07e-08,39;CL:0000211,2.07e-08,39;CL:0000221,3.39e-07,44;CL:0000133,3.39e-07,44;CL:0002319,6.78e-07,43;CL:0000791,6.94e-07,9;CL:0000789,6.94e-07,9;CL:0002420,6.94e-07,9;CL:0002419,6.94e-07,9;CL:0000790,6.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-21!52;UBERON:0005068!4.25e-21!52;UBERON:0006241!4.25e-21!52;UBERON:0007135!4.25e-21!52;UBERON:0000033!4.30e-20!63;UBERON:0000955!1.70e-19!50;UBERON:0006238!1.70e-19!50;UBERON:0001017!3.28e-19!73;UBERON:0005743!3.28e-19!73;UBERON:0000073!3.50e-19!75;UBERON:0001016!3.50e-19!75;UBERON:0002346!3.98e-19!71;UBERON:0003075!3.98e-19!71;UBERON:0007284!3.98e-19!71;UBERON:0002616!5.86e-19!49;UBERON:0003056!1.05e-18!49;UBERON:0002020!1.40e-18!34;UBERON:0004121!4.80e-17!102;UBERON:0000924!4.80e-17!102;UBERON:0006601!4.80e-17!102;UBERON:0003080!6.49e-17!40;UBERON:0002780!2.75e-16!39;UBERON:0001890!2.75e-16!39;UBERON:0006240!2.75e-16!39;UBERON:0007811!1.40e-15!86;UBERON:0002791!1.80e-15!29;UBERON:0003528!1.80e-15!29;UBERON:0001893!1.80e-15!29;UBERON:0000153!6.88e-13!94;UBERON:0000956!4.04e-11!21;UBERON:0001869!4.04e-11!21;UBERON:0000203!4.04e-11!21;UBERON:0002619!3.79e-09!17;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0000025!6.39e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.14e-25,34;UBERON:0000073,5.22e-25,54;UBERON:0002346,9.70e-25,64;UBERON:0003075,9.70e-25,64;UBERON:0007284,9.70e-25,64;UBERON:0001049,1.32e-23,52;UBERON:0005068,1.32e-23,52;UBERON:0006241,1.32e-23,52;UBERON:0007135,1.32e-23,52;UBERON:0010371,3.83e-22,73;UBERON:0001017,1.06e-21,73;UBERON:0003528,6.54e-21,29;UBERON:0002791,6.54e-21,29;UBERON:0001893,6.54e-21,29;UBERON:0001016,1.31e-20,75;UBERON:0004121,1.40e-20,95;UBERON:0000924,1.40e-20,95;UBERON:0006601,1.40e-20,95;UBERON:0000955,2.23e-19,47;UBERON:0006238,2.23e-19,47;UBERON:0003056,2.85e-19,49;UBERON:0002616,1.09e-18,46;UBERON:0003080,3.79e-17,40;UBERON:0002780,2.41e-16,39;UBERON:0001890,2.41e-16,39;UBERON:0006240,2.41e-16,39;UBERON:0000956,7.14e-15,21;UBERON:0001869,7.14e-15,21;UBERON:0000203,7.14e-15,21;UBERON:0010314,2.00e-12,92;UBERON:0002619,3.85e-12,17;UBERON:0002021,2.51e-11,10;UBERON:0000411,2.51e-11,10;UBERON:0001950,2.51e-11,10;UBERON:0000025,1.49e-07,114;UBERON:0002420,3.30e-07,8;UBERON:0007245,3.30e-07,8;UBERON:0010009,3.30e-07,8;UBERON:0010011,3.30e-07,8;UBERON:0000454,3.30e-07,8;UBERON:0003076,4.18e-07,12;UBERON:0003057,4.18e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,10.2007425518845,14.36044965947,4.91535505276186,8.21846247482424,1.43589886191606,4.62241970814255,4.45844052336887,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,3.99703463710028,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,8.70434570413613,4.7053131879945,0,0,0,10.9250888864183,11.1088105647127,12.0427966666174,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0,0,5.59923906465779,4.86021377994086,6.30974884054146,8.56952953211411,7.06779331045163,6.85948475603743,5.55903731905771,8.27296907949019,4.40463523997555,9.95961237064464,8.90917892886212,11.0784481693363,6.12967212136145,8.33461392890816,8.93385596804419,6.19038871034848,7.33431589328689,11.1958862479994,11.10499110233,13.6071595452469,0.302904773332736,0.68014404096107,0,0,0,0.539703191637817,0.649776417447669,1.34408066129201,0.842666520790511,0,0,0,1.69012103732017,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,0.68510327831436,1.03575153458869,0.29688427812965,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.07620470735796,9.63454851341893,0,0,0,0,10.4853447583376,8.23501085073528,12.1884721549478,15.4703644971126,15.8543583544805,5.61027720310812,11.1946471516753,0,0.248813941220186,0.252722758433675,4.20883711772948,0,0.919608417733892,1.98068342785884,1.20563854268572,4.55844544313897,3.33095672740609,3.37326208415024,8.53721123438752,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.584799949701329,0,0.268412837520744,9.04246778825747,7.51203670368776,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.538192240565737,2.41221760681684,4.80358294433172,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.952174563544055,2.53673742215138,2.67979744980525,1.7717175171902,2.07291199254733,3.93271955317771,1.89953480052485,4.91806799177139,0,0,0,0.551873492609465,8.99083303931635,6.56385444916338,0,0.252470927204373,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0,1.16902343164525,0.395287777946524,7.06906896127976,0.851640511249612,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.857348140126369,0.886701168211368,0.713475270408282,0.822745103010605,1.2178597964584,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.161464426695906,0.361877549568935,1.07435109602823,1.96969079694074,0,9.08583979851498,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0,0.540026704109006,0,0.218362563746178,0,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,5.4685841634459,7.02557607652263,2.17425708743405,0.288030006257865,0.316011120628178,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0.304827226619999,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,15.8130515932779,16.1113832777512,18.3326564300607,21.1379414282736,19.8673930733486,13.5970901530146,18.9006300064906,24.3173449741079,14.0474146785103,18.6393712230655,0.93408612825759,0.798049746802062,1.36586884603307,0.972426868273176,1.25767897576789,1.2869045591501,0.44449345560323,1.44224540067226,1.28367683836726,1.01078884705519,1.01391719956096,1.69763707247469,1.87283014939765,1.34452820050225,1.60819313075717,2.38146845641537,1.39061191133827,1.92909220463705,1.23625770240992,1.17759136107518,2.74295401908332,1.59728225543404,0.715308569841963,1.45346416632329,1.2234219453993,1.69229215783353,3.10977553883713,1.05227884575137,1.90125759384206,0.561142271657738,1.30498519936592,1.0835493061312,1.63692417267876,2.16911577660352,0.385813221962283,4.49659040288303,1.87145286756327,1.71896843238639,1.53030665655075,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Tbc1d30 | |||
}} |
Revision as of 15:54, 12 September 2013
Short description: | p2@Tbc1d30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbc1d30_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 157bp_to_ENSMUST00000064107, NM_029057, uc007hfm.2_5end |
EntrezGene: | Tbc1d30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.26e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.26e-18 | 23 |
neuron | 1.75e-11 | 33 |
neuronal stem cell | 1.75e-11 | 33 |
neuroblast | 1.75e-11 | 33 |
electrically signaling cell | 1.75e-11 | 33 |
electrically responsive cell | 2.07e-08 | 39 |
electrically active cell | 2.07e-08 | 39 |
ectodermal cell | 3.39e-07 | 44 |
neurectodermal cell | 3.39e-07 | 44 |
neural cell | 6.78e-07 | 43 |
mature alpha-beta T cell | 6.94e-07 | 9 |
alpha-beta T cell | 6.94e-07 | 9 |
immature T cell | 6.94e-07 | 9 |
mature T cell | 6.94e-07 | 9 |
immature alpha-beta T cell | 6.94e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.