FFCP PHASE1:Hg19::chr2:68479800..68479811,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9317 | |||
|TSSclassifier=S | |||
|UniProt=P63098 | |||
|association_with_transcript=-137bp_to_ENST00000234310_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_PPP3R1_5end | |||
|id=chr2:68479800..68479811,- | |||
|ontology_enrichment_celltype=CL:0000766!1.73e-21!76;CL:0000763!4.11e-21!112;CL:0000049!4.11e-21!112;CL:0000557!8.90e-19!71;CL:0000839!1.64e-18!70;CL:0002009!7.86e-17!65;CL:0000860!2.14e-16!45;CL:0000037!2.65e-16!172;CL:0000566!2.65e-16!172;CL:0002194!3.65e-16!63;CL:0000576!3.65e-16!63;CL:0000040!3.65e-16!63;CL:0000559!3.65e-16!63;CL:0002057!3.83e-16!42;CL:0000738!1.39e-15!140;CL:0002032!2.30e-15!165;CL:0000837!2.30e-15!165;CL:0000988!1.18e-14!182;CL:0002031!6.47e-12!124;CL:0002087!2.38e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.86e-17;33!CL:0002057;3.86e-17;33!CL:0000473;4.69e-13;39!CL:0000234;4.69e-13;39!CL:0000576;3.87e-11;48!CL:0000766;2.05e-09;69!CL:0000763;8.06e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.86e-21,72;CL:0000763,2.27e-21,108;CL:0000049,2.27e-21,108;CL:0000557,1.22e-18,67;CL:0000839,2.30e-18,66;CL:0002009,1.27e-16,61;CL:0000860,1.83e-16,42;CL:0002057,1.83e-16,42;CL:0000037,5.28e-16,168;CL:0002194,6.24e-16,59;CL:0000576,6.24e-16,59;CL:0000040,6.24e-16,59;CL:0000559,6.24e-16,59;CL:0000473,1.72e-15,48;CL:0000234,1.72e-15,48;CL:0002032,4.82e-15,161;CL:0000837,4.82e-15,161;CL:0000738,5.60e-15,136;CL:0000988,2.58e-14,177;CL:0002031,2.94e-11,120;CL:0002087,1.11e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@PPP3R1 | |||
}} |
Revision as of 19:25, 12 September 2013
Short description: | p3@PPP3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PPP3R1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -137bp_to_ENST00000234310_5end |
EntrezGene: | PPP3R1 |
HGNC: | 9317 |
UniProt: | P63098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.86e-21 | 72 |
myeloid cell | 2.27e-21 | 108 |
common myeloid progenitor | 2.27e-21 | 108 |
granulocyte monocyte progenitor cell | 1.22e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.30e-18 | 66 |
macrophage dendritic cell progenitor | 1.27e-16 | 61 |
classical monocyte | 1.83e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-16 | 42 |
hematopoietic stem cell | 5.28e-16 | 168 |
monopoietic cell | 6.24e-16 | 59 |
monocyte | 6.24e-16 | 59 |
monoblast | 6.24e-16 | 59 |
promonocyte | 6.24e-16 | 59 |
defensive cell | 1.72e-15 | 48 |
phagocyte | 1.72e-15 | 48 |
hematopoietic oligopotent progenitor cell | 4.82e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-15 | 161 |
leukocyte | 5.60e-15 | 136 |
hematopoietic cell | 2.58e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 2.94e-11 | 120 |
nongranular leukocyte | 1.11e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.31e-26 | 114 |
hematopoietic system | 2.65e-20 | 98 |
blood island | 2.65e-20 | 98 |
hemolymphoid system | 4.57e-17 | 108 |
bone marrow | 1.63e-15 | 76 |
regional part of forebrain | 5.00e-15 | 41 |
forebrain | 5.00e-15 | 41 |
anterior neural tube | 5.00e-15 | 41 |
future forebrain | 5.00e-15 | 41 |
neural tube | 4.55e-14 | 56 |
neural rod | 4.55e-14 | 56 |
future spinal cord | 4.55e-14 | 56 |
neural keel | 4.55e-14 | 56 |
cerebral hemisphere | 6.17e-14 | 32 |
telencephalon | 7.70e-14 | 34 |
regional part of nervous system | 9.95e-14 | 53 |
regional part of brain | 9.95e-14 | 53 |
brain grey matter | 1.00e-13 | 34 |
gray matter | 1.00e-13 | 34 |
bone element | 1.97e-13 | 82 |
immune system | 3.37e-13 | 93 |
regional part of telencephalon | 3.94e-13 | 32 |
regional part of cerebral cortex | 1.28e-12 | 22 |
neocortex | 2.16e-11 | 20 |
skeletal element | 1.77e-10 | 90 |
brain | 2.31e-10 | 68 |
future brain | 2.31e-10 | 68 |
central nervous system | 3.61e-10 | 81 |
cerebral cortex | 8.19e-10 | 25 |
pallium | 8.19e-10 | 25 |
nervous system | 2.90e-09 | 89 |
skeletal system | 4.54e-08 | 100 |
pre-chordal neural plate | 2.40e-07 | 61 |
neural plate | 2.64e-07 | 82 |
presumptive neural plate | 2.64e-07 | 82 |
neurectoderm | 6.26e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.