FFCP PHASE1:Mm9::chr13:100204256..100204268,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204256..100204268,-|id=chr13:100204256..100204268,-|ontology_enrichment_celltype=CL:0000117!8.00e-14!23;CL:0000337!8.00e-14!23;CL:0000540!9.83e-13!33;CL:0000047!9.83e-13!33;CL:0000031!9.83e-13!33;CL:0000404!9.83e-13!33;CL:0000393!1.81e-10!39;CL:0000211!1.81e-10!39;CL:0002319!7.86e-08!43;CL:0000221!8.13e-08!44;CL:0000133!8.13e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-21,23;CL:0000337,1.10e-21,23;CL:0000540,2.88e-17,33;CL:0000047,2.88e-17,33;CL:0000031,2.88e-17,33;CL:0000404,2.88e-17,33;CL:0000393,1.74e-13,39;CL:0000211,1.74e-13,39;CL:0002319,1.42e-11,43;CL:0000221,3.75e-11,44;CL:0000133,3.75e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.59e-24!71;UBERON:0003075!3.59e-24!71;UBERON:0007284!3.59e-24!71;UBERON:0001017!6.24e-21!73;UBERON:0005743!6.24e-21!73;UBERON:0000073!9.35e-21!75;UBERON:0001016!9.35e-21!75;UBERON:0001049!8.65e-20!52;UBERON:0005068!8.65e-20!52;UBERON:0006241!8.65e-20!52;UBERON:0007135!8.65e-20!52;UBERON:0000033!3.51e-19!63;UBERON:0004121!3.55e-19!102;UBERON:0000924!3.55e-19!102;UBERON:0006601!3.55e-19!102;UBERON:0003056!3.66e-19!49;UBERON:0002616!4.78e-18!49;UBERON:0000955!5.35e-18!50;UBERON:0006238!5.35e-18!50;UBERON:0002020!2.00e-17!34;UBERON:0003080!1.90e-16!40;UBERON:0002780!6.27e-16!39;UBERON:0001890!6.27e-16!39;UBERON:0006240!6.27e-16!39;UBERON:0002791!1.68e-14!29;UBERON:0003528!1.68e-14!29;UBERON:0001893!1.68e-14!29;UBERON:0000956!2.02e-10!21;UBERON:0001869!2.02e-10!21;UBERON:0000203!2.02e-10!21;UBERON:0007811!4.00e-10!86;UBERON:0000025!2.30e-09!114;UBERON:0000153!1.95e-08!94;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0002619!3.35e-08!17;UBERON:0004111!6.01e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.46e-36,64;UBERON:0003075,2.46e-36,64;UBERON:0007284,2.46e-36,64;UBERON:0000073,1.65e-35,54;UBERON:0001017,3.29e-33,73;UBERON:0001049,3.80e-33,52;UBERON:0005068,3.80e-33,52;UBERON:0006241,3.80e-33,52;UBERON:0007135,3.80e-33,52;UBERON:0001016,6.26e-32,75;UBERON:0010371,4.40e-30,73;UBERON:0003056,2.43e-29,49;UBERON:0002020,4.21e-29,34;UBERON:0004121,4.26e-29,95;UBERON:0000924,4.26e-29,95;UBERON:0006601,4.26e-29,95;UBERON:0002616,8.82e-28,46;UBERON:0003080,2.19e-27,40;UBERON:0010314,4.03e-27,92;UBERON:0000955,5.96e-27,47;UBERON:0006238,5.96e-27,47;UBERON:0002780,2.04e-26,39;UBERON:0001890,2.04e-26,39;UBERON:0006240,2.04e-26,39;UBERON:0003528,4.73e-25,29;UBERON:0002791,4.73e-25,29;UBERON:0001893,4.73e-25,29;UBERON:0000956,1.93e-18,21;UBERON:0001869,1.93e-18,21;UBERON:0000203,1.93e-18,21;UBERON:0002021,2.63e-14,10;UBERON:0000411,2.63e-14,10;UBERON:0001950,2.63e-14,10;UBERON:0002619,3.12e-14,17;UBERON:0000025,5.61e-13,114;UBERON:0004111,2.76e-11,122;UBERON:0000483,1.43e-08,174;UBERON:0000119,2.58e-08,176;UBERON:0002420,1.10e-07,8;UBERON:0007245,1.10e-07,8;UBERON:0010009,1.10e-07,8;UBERON:0010011,1.10e-07,8;UBERON:0000454,1.10e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,2.11596391708813,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0,7.25827286159344,3.91517221161903,3.78584930432488,3.42781181284564,0.662605622854841,2.08234358665422,0.670918297127655,1.83843757322004,1.10115880999389,6.51205424234457,8.90917892886212,3.16527090552465,1.09785172322892,7.8137005583514,1.67509799400829,2.8138130501584,5.95913166329559,6.48182888042069,11.3897344639282,4.84638559145781,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0.681721290312231,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.904335843315735,2.3517741427141,0.251333182659351,0,0,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,2.30391377494801,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,9.42407640846483,1.04294592115366,4.09144731728529,1.45451631191692,2.92034273521964,2.24046600470696,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,0.459804208866946,0.540186389416048,2.86339153887859,2.99360596265843,4.09963904911519,3.74806898238915,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.36012412292203,0.23674473558521,0.590292695242212,1.23413690309903,0.930135779001631,1.3413670069981,0.817357396570186,0.658239399653922,2.13417703302824,0.486412857275134,0.146199987425332,0,0.268412837520744,1.26173969138476,13.8921226712034,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.99478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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100204256..100204268,- | |||
|id=chr13:100204256..100204268,- | |||
|ontology_enrichment_celltype=CL:0000117!8.00e-14!23;CL:0000337!8.00e-14!23;CL:0000540!9.83e-13!33;CL:0000047!9.83e-13!33;CL:0000031!9.83e-13!33;CL:0000404!9.83e-13!33;CL:0000393!1.81e-10!39;CL:0000211!1.81e-10!39;CL:0002319!7.86e-08!43;CL:0000221!8.13e-08!44;CL:0000133!8.13e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-21,23;CL:0000337,1.10e-21,23;CL:0000540,2.88e-17,33;CL:0000047,2.88e-17,33;CL:0000031,2.88e-17,33;CL:0000404,2.88e-17,33;CL:0000393,1.74e-13,39;CL:0000211,1.74e-13,39;CL:0002319,1.42e-11,43;CL:0000221,3.75e-11,44;CL:0000133,3.75e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.59e-24!71;UBERON:0003075!3.59e-24!71;UBERON:0007284!3.59e-24!71;UBERON:0001017!6.24e-21!73;UBERON:0005743!6.24e-21!73;UBERON:0000073!9.35e-21!75;UBERON:0001016!9.35e-21!75;UBERON:0001049!8.65e-20!52;UBERON:0005068!8.65e-20!52;UBERON:0006241!8.65e-20!52;UBERON:0007135!8.65e-20!52;UBERON:0000033!3.51e-19!63;UBERON:0004121!3.55e-19!102;UBERON:0000924!3.55e-19!102;UBERON:0006601!3.55e-19!102;UBERON:0003056!3.66e-19!49;UBERON:0002616!4.78e-18!49;UBERON:0000955!5.35e-18!50;UBERON:0006238!5.35e-18!50;UBERON:0002020!2.00e-17!34;UBERON:0003080!1.90e-16!40;UBERON:0002780!6.27e-16!39;UBERON:0001890!6.27e-16!39;UBERON:0006240!6.27e-16!39;UBERON:0002791!1.68e-14!29;UBERON:0003528!1.68e-14!29;UBERON:0001893!1.68e-14!29;UBERON:0000956!2.02e-10!21;UBERON:0001869!2.02e-10!21;UBERON:0000203!2.02e-10!21;UBERON:0007811!4.00e-10!86;UBERON:0000025!2.30e-09!114;UBERON:0000153!1.95e-08!94;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0002619!3.35e-08!17;UBERON:0004111!6.01e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.46e-36,64;UBERON:0003075,2.46e-36,64;UBERON:0007284,2.46e-36,64;UBERON:0000073,1.65e-35,54;UBERON:0001017,3.29e-33,73;UBERON:0001049,3.80e-33,52;UBERON:0005068,3.80e-33,52;UBERON:0006241,3.80e-33,52;UBERON:0007135,3.80e-33,52;UBERON:0001016,6.26e-32,75;UBERON:0010371,4.40e-30,73;UBERON:0003056,2.43e-29,49;UBERON:0002020,4.21e-29,34;UBERON:0004121,4.26e-29,95;UBERON:0000924,4.26e-29,95;UBERON:0006601,4.26e-29,95;UBERON:0002616,8.82e-28,46;UBERON:0003080,2.19e-27,40;UBERON:0010314,4.03e-27,92;UBERON:0000955,5.96e-27,47;UBERON:0006238,5.96e-27,47;UBERON:0002780,2.04e-26,39;UBERON:0001890,2.04e-26,39;UBERON:0006240,2.04e-26,39;UBERON:0003528,4.73e-25,29;UBERON:0002791,4.73e-25,29;UBERON:0001893,4.73e-25,29;UBERON:0000956,1.93e-18,21;UBERON:0001869,1.93e-18,21;UBERON:0000203,1.93e-18,21;UBERON:0002021,2.63e-14,10;UBERON:0000411,2.63e-14,10;UBERON:0001950,2.63e-14,10;UBERON:0002619,3.12e-14,17;UBERON:0000025,5.61e-13,114;UBERON:0004111,2.76e-11,122;UBERON:0000483,1.43e-08,174;UBERON:0000119,2.58e-08,176;UBERON:0002420,1.10e-07,8;UBERON:0007245,1.10e-07,8;UBERON:0010009,1.10e-07,8;UBERON:0010011,1.10e-07,8;UBERON:0000454,1.10e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,2.11596391708813,2.53532561402472,0,0.889294796111139,0,0,0,0.299600110518405,0,7.25827286159344,3.91517221161903,3.78584930432488,3.42781181284564,0.662605622854841,2.08234358665422,0.670918297127655,1.83843757322004,1.10115880999389,6.51205424234457,8.90917892886212,3.16527090552465,1.09785172322892,7.8137005583514,1.67509799400829,2.8138130501584,5.95913166329559,6.48182888042069,11.3897344639282,4.84638559145781,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0.681721290312231,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.904335843315735,2.3517741427141,0.251333182659351,0,0,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,2.30391377494801,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,9.42407640846483,1.04294592115366,4.09144731728529,1.45451631191692,2.92034273521964,2.24046600470696,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,0.459804208866946,0.540186389416048,2.86339153887859,2.99360596265843,4.09963904911519,3.74806898238915,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.36012412292203,0.23674473558521,0.590292695242212,1.23413690309903,0.930135779001631,1.3413670069981,0.817357396570186,0.658239399653922,2.13417703302824,0.486412857275134,0.146199987425332,0,0.268412837520744,1.26173969138476,13.8921226712034,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.994782360205754,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.771494018793504,0.0632365371242573,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,1.01847051465113,0.938760993154008,0.167506257441816,0,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0,0,0,0,0,1.28440471990234,3.6335622843583,0,0,1.26203287766503,0.390438744296638,1.07711698866399,0.238968797952552,1.33679204449436,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0,0.178065603667255,1.14020871547503,0.659880491890142,0,0,0.302323556964751,0.565815239267694,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,1.08036656418786,0.646793418913773,0.214337035031592,0.177340233642274,2.67553226403106,1.64549020602121,1.2178597964584,0.469343416127421,0,0.220528398054962,0,0,0.301564624640779,0,0,0.291480836629851,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.836353184057875,0.655087691238533,0.944050424693745,0.41326727862668,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.645799117388655,1.18269287843545,0.821500670520278,1.43224823328345,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0,0.269141569828427,0.167884616364078,0,0,0.183151624267265,0,0,7.90652579663893,7.82552902062201,9.16632821503035,15.8104927756193,6.16574267793578,6.7985450765073,6.07520250208625,3.15224842256954,5.43770890781046,3.62432218226274,1.764384908931,0.798049746802062,0.512200817262403,0,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0,0,1.40462261204824,0.768301828858431,0.631790158511746,0.476293691283074,0.695305955669133,1.15745532278223,0.824171801606613,0.588795680537589,1.02860775715625,1.24233064311536,1.1921809497366,0.290692833264657,0.470546902076653,0.846146078916765,0.365855945745545,1.05227884575137,0.950628796921032,0,0.593175090620871,1.47756723563345,0.818462086339379,0.309873682371932,0.578719832943424,0.749431733813838,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr13:100204256..100204268,- | |||
}} |
Revision as of 23:41, 12 September 2013
Short description: | p@chr13:100204256..100204268, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204256..100204268, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-21 | 23 |
neuron | 2.88e-17 | 33 |
neuronal stem cell | 2.88e-17 | 33 |
neuroblast | 2.88e-17 | 33 |
electrically signaling cell | 2.88e-17 | 33 |
electrically responsive cell | 1.74e-13 | 39 |
electrically active cell | 1.74e-13 | 39 |
neural cell | 1.42e-11 | 43 |
ectodermal cell | 3.75e-11 | 44 |
neurectodermal cell | 3.75e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.