FFCP PHASE1:Mm9::chr14:122874593..122874610,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=22772|HGNC=|MCL_coexpression_id=819|UniProt=D3YXF6,F8VPV3,Q62520|association_with_transcript=0bp_to_ENSMUST00000110682,NM_009574,uc007vbd.1_5end|description=CAGE_peak_2_at_Zic2_5end|id=chr14:122874593..122874610,+|ontology_enrichment_celltype=CL:0000117!4.85e-16!23;CL:0000337!4.85e-16!23;CL:0000221!2.86e-15!44;CL:0000133!2.86e-15!44;CL:0002319!4.01e-15!43;CL:0000055!9.32e-13!50;CL:0000540!8.67e-10!33;CL:0000047!8.67e-10!33;CL:0000031!8.67e-10!33;CL:0000404!8.67e-10!33;CL:0000393!2.62e-08!39;CL:0000211!2.62e-08!39;CL:0002453!4.70e-08!8;CL:0000333!8.46e-07!10;CL:0000095!8.46e-07!10;CL:0000243!8.46e-07!10;CL:0000123!8.46e-07!10;CL:0000125!8.46e-07!10;CL:0000030!8.46e-07!10;CL:0000339!8.46e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,9.96e-21,43;CL:0000221,4.72e-20,44;CL:0000133,4.72e-20,44;CL:0000117,2.76e-19,23;CL:0000337,2.76e-19,23;CL:0000540,2.92e-13,33;CL:0000047,2.92e-13,33;CL:0000031,2.92e-13,33;CL:0000404,2.92e-13,33;CL:0002453,1.43e-11,8;CL:0000393,2.67e-10,39;CL:0000211,2.67e-10,39;CL:0002321,1.93e-09,70;CL:0000128,5.94e-09,6;CL:0000126,5.94e-09,6;CL:0000127,5.94e-09,6;CL:0000333,7.30e-09,10;CL:0000095,7.30e-09,10;CL:0000243,7.30e-09,10;CL:0000123,7.30e-09,10;CL:0000125,7.30e-09,10;CL:0000030,7.30e-09,10;CL:0000339,7.30e-09,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.24e-25!63;UBERON:0001017!4.62e-25!73;UBERON:0005743!4.62e-25!73;UBERON:0000073!1.37e-24!75;UBERON:0001016!1.37e-24!75;UBERON:0004121!5.69e-22!102;UBERON:0000924!5.69e-22!102;UBERON:0006601!5.69e-22!102;UBERON:0001049!1.25e-21!52;UBERON:0005068!1.25e-21!52;UBERON:0006241!1.25e-21!52;UBERON:0007135!1.25e-21!52;UBERON:0000955!1.44e-20!50;UBERON:0006238!1.44e-20!50;UBERON:0002346!1.70e-20!71;UBERON:0003075!1.70e-20!71;UBERON:0007284!1.70e-20!71;UBERON:0002616!8.58e-20!49;UBERON:0003056!1.76e-18!49;UBERON:0000153!3.60e-16!94;UBERON:0007811!1.46e-13!86;UBERON:0003080!1.89e-13!40;UBERON:0002780!3.00e-13!39;UBERON:0001890!3.00e-13!39;UBERON:0006240!3.00e-13!39;UBERON:0002020!2.25e-11!34;UBERON:0003076!1.81e-09!12;UBERON:0003057!1.81e-09!12;UBERON:0002791!2.63e-08!29;UBERON:0003528!2.63e-08!29;UBERON:0001893!2.63e-08!29;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.94e-33,73;UBERON:0004121,9.52e-32,95;UBERON:0000924,9.52e-32,95;UBERON:0006601,9.52e-32,95;UBERON:0001016,1.40e-31,75;UBERON:0002346,1.20e-28,64;UBERON:0003075,1.20e-28,64;UBERON:0007284,1.20e-28,64;UBERON:0000073,1.55e-28,54;UBERON:0010371,3.17e-25,73;UBERON:0001049,7.38e-25,52;UBERON:0005068,7.38e-25,52;UBERON:0006241,7.38e-25,52;UBERON:0007135,7.38e-25,52;UBERON:0000955,1.65e-21,47;UBERON:0006238,1.65e-21,47;UBERON:0002616,1.95e-20,46;UBERON:0003056,1.65e-19,49;UBERON:0010314,2.04e-17,92;UBERON:0002780,6.92e-15,39;UBERON:0001890,6.92e-15,39;UBERON:0006240,6.92e-15,39;UBERON:0003080,2.47e-14,40;UBERON:0003076,2.68e-12,12;UBERON:0003057,2.68e-12,12;UBERON:0002020,5.94e-12,34;UBERON:0001894,1.85e-09,10;UBERON:0006222,1.85e-09,10;UBERON:0004733,1.78e-08,6;UBERON:0004732,1.78e-08,6;UBERON:0002028,1.78e-08,6;UBERON:0007277,1.78e-08,6;UBERON:0002420,4.09e-08,8;UBERON:0007245,4.09e-08,8;UBERON:0010009,4.09e-08,8;UBERON:0010011,4.09e-08,8;UBERON:0000454,4.09e-08,8;UBERON:0003528,7.69e-08,29;UBERON:0002791,7.69e-08,29;UBERON:0001893,7.69e-08,29;UBERON:0000007,2.87e-07,8;UBERON:0003296,2.87e-07,8;UBERON:0010133,2.87e-07,8;UBERON:0000369,3.99e-07,5;UBERON:0002435,3.99e-07,5;UBERON:0000204,3.99e-07,5;UBERON:0010082,3.99e-07,5;UBERON:0001948,9.51e-07,5;UBERON:0002315,9.51e-07,5|phase1_expression=7.68714466103011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,0,17.2126095756569,1.30815093828268,8.12838876117546,10.4992145500113,9.09911740564856,5.75010257459886,0,0,0,0,0,0,5.66486090406874,6.87688273053643,5.70448263155561,5.76035704517525,10.6715375533337,0,0,0,7.49000276296012,7.30014780110954,1.76272340924412,2.16009501330705,1.68259969081106,3.14216082844184,2.20868540951614,0.61245399607477,0.383381884072945,1.83843757322004,1.10115880999389,6.51205424234457,3.07213066512487,17.672762555846,19.6698433745181,8.33461392890816,8.93385596804419,0.56276261003168,3.20876320331301,5.89257170947335,3.84403538157578,4.10078780815661,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.9705978082863,46.0782754989601,0,0,0,0,0.299581278809645,1.83000241127451,1.00523481690292,1.39059456153821,0,6.64921742590592,3.56930778749067,0,0,0,0.210441855886474,2.86264974517948,3.90833577536904,3.96136685571768,1.65775299619287,5.8511389270142,3.84341160854549,2.62364828767241,0.517406741478031,8.191583731448,1.32374256117473,1.75951124163949,0.43839146485515,1.39023624612799,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.91037527041281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88097750450096,4.01011919726539,4.50107773566344,3.01478397191865,2.85390108163313,1.97458824722545,4.26250928760439,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7737612073591,7.17710852875806,2.18250001273302,0,0,0,0,0,0,0,0,1.03111909406213,0,0.755393897389701,0,0,0,0.51776031175182,2.07574695168353,1.19707462020309,0.682934423016537,2.18796045361465,1.25767897576789,0.919217542250071,0.44449345560323,0.412070114477788,0.64183841918363,0,0.25347929989024,1.69763707247469,0.655490552289177,0.448176066834085,0.689225627467359,0.952587382566147,0.579421629724277,0.77163688185482,0,0.441596760403192,0.685738504770831,0.887379030796687,0.715308569841963,0.872078499793971,0.564656282491984,0.507687647350059,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.788035859004508,0.818462086339379,0.464810523557898,0.771626443924566,2.24829520144151,0.467863216890817,0.429742108096597,0.956441660344217,0.220591419119515,0|short_description=p2@Zic2}} | ||
|EntrezGene=22772 | |||
|HGNC= | |||
|MCL_coexpression_id=819 | |||
|UniProt=D3YXF6,F8VPV3,Q62520 | |||
|association_with_transcript=0bp_to_ENSMUST00000110682,NM_009574,uc007vbd.1_5end | |||
|description=CAGE_peak_2_at_Zic2_5end | |||
|id=chr14:122874593..122874610,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.85e-16!23;CL:0000337!4.85e-16!23;CL:0000221!2.86e-15!44;CL:0000133!2.86e-15!44;CL:0002319!4.01e-15!43;CL:0000055!9.32e-13!50;CL:0000540!8.67e-10!33;CL:0000047!8.67e-10!33;CL:0000031!8.67e-10!33;CL:0000404!8.67e-10!33;CL:0000393!2.62e-08!39;CL:0000211!2.62e-08!39;CL:0002453!4.70e-08!8;CL:0000333!8.46e-07!10;CL:0000095!8.46e-07!10;CL:0000243!8.46e-07!10;CL:0000123!8.46e-07!10;CL:0000125!8.46e-07!10;CL:0000030!8.46e-07!10;CL:0000339!8.46e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.96e-21,43;CL:0000221,4.72e-20,44;CL:0000133,4.72e-20,44;CL:0000117,2.76e-19,23;CL:0000337,2.76e-19,23;CL:0000540,2.92e-13,33;CL:0000047,2.92e-13,33;CL:0000031,2.92e-13,33;CL:0000404,2.92e-13,33;CL:0002453,1.43e-11,8;CL:0000393,2.67e-10,39;CL:0000211,2.67e-10,39;CL:0002321,1.93e-09,70;CL:0000128,5.94e-09,6;CL:0000126,5.94e-09,6;CL:0000127,5.94e-09,6;CL:0000333,7.30e-09,10;CL:0000095,7.30e-09,10;CL:0000243,7.30e-09,10;CL:0000123,7.30e-09,10;CL:0000125,7.30e-09,10;CL:0000030,7.30e-09,10;CL:0000339,7.30e-09,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.24e-25!63;UBERON:0001017!4.62e-25!73;UBERON:0005743!4.62e-25!73;UBERON:0000073!1.37e-24!75;UBERON:0001016!1.37e-24!75;UBERON:0004121!5.69e-22!102;UBERON:0000924!5.69e-22!102;UBERON:0006601!5.69e-22!102;UBERON:0001049!1.25e-21!52;UBERON:0005068!1.25e-21!52;UBERON:0006241!1.25e-21!52;UBERON:0007135!1.25e-21!52;UBERON:0000955!1.44e-20!50;UBERON:0006238!1.44e-20!50;UBERON:0002346!1.70e-20!71;UBERON:0003075!1.70e-20!71;UBERON:0007284!1.70e-20!71;UBERON:0002616!8.58e-20!49;UBERON:0003056!1.76e-18!49;UBERON:0000153!3.60e-16!94;UBERON:0007811!1.46e-13!86;UBERON:0003080!1.89e-13!40;UBERON:0002780!3.00e-13!39;UBERON:0001890!3.00e-13!39;UBERON:0006240!3.00e-13!39;UBERON:0002020!2.25e-11!34;UBERON:0003076!1.81e-09!12;UBERON:0003057!1.81e-09!12;UBERON:0002791!2.63e-08!29;UBERON:0003528!2.63e-08!29;UBERON:0001893!2.63e-08!29;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.94e-33,73;UBERON:0004121,9.52e-32,95;UBERON:0000924,9.52e-32,95;UBERON:0006601,9.52e-32,95;UBERON:0001016,1.40e-31,75;UBERON:0002346,1.20e-28,64;UBERON:0003075,1.20e-28,64;UBERON:0007284,1.20e-28,64;UBERON:0000073,1.55e-28,54;UBERON:0010371,3.17e-25,73;UBERON:0001049,7.38e-25,52;UBERON:0005068,7.38e-25,52;UBERON:0006241,7.38e-25,52;UBERON:0007135,7.38e-25,52;UBERON:0000955,1.65e-21,47;UBERON:0006238,1.65e-21,47;UBERON:0002616,1.95e-20,46;UBERON:0003056,1.65e-19,49;UBERON:0010314,2.04e-17,92;UBERON:0002780,6.92e-15,39;UBERON:0001890,6.92e-15,39;UBERON:0006240,6.92e-15,39;UBERON:0003080,2.47e-14,40;UBERON:0003076,2.68e-12,12;UBERON:0003057,2.68e-12,12;UBERON:0002020,5.94e-12,34;UBERON:0001894,1.85e-09,10;UBERON:0006222,1.85e-09,10;UBERON:0004733,1.78e-08,6;UBERON:0004732,1.78e-08,6;UBERON:0002028,1.78e-08,6;UBERON:0007277,1.78e-08,6;UBERON:0002420,4.09e-08,8;UBERON:0007245,4.09e-08,8;UBERON:0010009,4.09e-08,8;UBERON:0010011,4.09e-08,8;UBERON:0000454,4.09e-08,8;UBERON:0003528,7.69e-08,29;UBERON:0002791,7.69e-08,29;UBERON:0001893,7.69e-08,29;UBERON:0000007,2.87e-07,8;UBERON:0003296,2.87e-07,8;UBERON:0010133,2.87e-07,8;UBERON:0000369,3.99e-07,5;UBERON:0002435,3.99e-07,5;UBERON:0000204,3.99e-07,5;UBERON:0010082,3.99e-07,5;UBERON:0001948,9.51e-07,5;UBERON:0002315,9.51e-07,5 | |||
|phase1_expression=7.68714466103011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,0,17.2126095756569,1.30815093828268,8.12838876117546,10.4992145500113,9.09911740564856,5.75010257459886,0,0,0,0,0,0,5.66486090406874,6.87688273053643,5.70448263155561,5.76035704517525,10.6715375533337,0,0,0,7.49000276296012,7.30014780110954,1.76272340924412,2.16009501330705,1.68259969081106,3.14216082844184,2.20868540951614,0.61245399607477,0.383381884072945,1.83843757322004,1.10115880999389,6.51205424234457,3.07213066512487,17.672762555846,19.6698433745181,8.33461392890816,8.93385596804419,0.56276261003168,3.20876320331301,5.89257170947335,3.84403538157578,4.10078780815661,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.9705978082863,46.0782754989601,0,0,0,0,0.299581278809645,1.83000241127451,1.00523481690292,1.39059456153821,0,6.64921742590592,3.56930778749067,0,0,0,0.210441855886474,2.86264974517948,3.90833577536904,3.96136685571768,1.65775299619287,5.8511389270142,3.84341160854549,2.62364828767241,0.517406741478031,8.191583731448,1.32374256117473,1.75951124163949,0.43839146485515,1.39023624612799,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.91037527041281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.22702204525186,0,0,0,0,0,0,0,0,0,0,0,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88097750450096,4.01011919726539,4.50107773566344,3.01478397191865,2.85390108163313,1.97458824722545,4.26250928760439,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7737612073591,7.17710852875806,2.18250001273302,0,0,0,0,0,0,0,0,1.03111909406213,0,0.755393897389701,0,0,0,0.51776031175182,2.07574695168353,1.19707462020309,0.682934423016537,2.18796045361465,1.25767897576789,0.919217542250071,0.44449345560323,0.412070114477788,0.64183841918363,0,0.25347929989024,1.69763707247469,0.655490552289177,0.448176066834085,0.689225627467359,0.952587382566147,0.579421629724277,0.77163688185482,0,0.441596760403192,0.685738504770831,0.887379030796687,0.715308569841963,0.872078499793971,0.564656282491984,0.507687647350059,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.711810108745045,0.788035859004508,0.818462086339379,0.464810523557898,0.771626443924566,2.24829520144151,0.467863216890817,0.429742108096597,0.956441660344217,0.220591419119515,0 | |||
|short_description=p2@Zic2 | |||
}} |
Revision as of 01:37, 13 September 2013
Short description: | p2@Zic2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zic2_5end |
Coexpression cluster: | MCL_coexpression_mm9:819 |
Association with transcript: | 0bp_to_ENSMUST00000110682, NM_009574, uc007vbd.1_5end |
EntrezGene: | Zic2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.96e-21 | 43 |
ectodermal cell | 4.72e-20 | 44 |
neurectodermal cell | 4.72e-20 | 44 |
CNS neuron (sensu Vertebrata) | 2.76e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.76e-19 | 23 |
neuron | 2.92e-13 | 33 |
neuronal stem cell | 2.92e-13 | 33 |
neuroblast | 2.92e-13 | 33 |
electrically signaling cell | 2.92e-13 | 33 |
oligodendrocyte precursor cell | 1.43e-11 | 8 |
electrically responsive cell | 2.67e-10 | 39 |
electrically active cell | 2.67e-10 | 39 |
embryonic cell | 1.93e-09 | 70 |
oligodendrocyte | 5.94e-09 | 6 |
macroglial cell | 5.94e-09 | 6 |
astrocyte | 5.94e-09 | 6 |
migratory neural crest cell | 7.30e-09 | 10 |
neuron associated cell | 7.30e-09 | 10 |
glial cell (sensu Vertebrata) | 7.30e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 7.30e-09 | 10 |
glial cell | 7.30e-09 | 10 |
glioblast | 7.30e-09 | 10 |
glioblast (sensu Vertebrata) | 7.30e-09 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.